Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0180g00120.t01
CDS Infomation

cds chromosome:12X:3:6037870:6059709:1 gene:VIT_03s0180g00120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCCTTCTCAATCTCCACCAGCCTCTCTCCTTCACACTCACTCTCAAAACGATCA
CCTCTGTCACCTGCTTACTCTCGTCCTTGGGTCCCATCTCACCCTCGTCTTAACTCCTCT
ACTTGGAGGTTCAGACCTCCGAAATTGAACGCCCGACTCGAAAACAAGCCCGGAGACCCA
CCCTCCACCCCGCGAGAGGCCCAATCCTTGTCTGACAAACAGCTTCAGGAACTGACACCA
TCATCTGGATCATGTGATCCCCTATGTTCTGTTGATGAAACAAGCTCACAAGATTTTGAA
GCCACATACCAGCCAAAGACCGATTTGCTGAAAGCTCTTGCAATTCTTGCAGCAGCTACA
ACAGGGGCAGTTGCAATTAATCAGTCGTGGGTTGCTGCTAATCAGGATGCTGCTATGGCA
TTGCTATTTGGAGTGGGATATGCTGGAATAATTTTTGAAGAATCTCTAGCCTTTAACAAA
AGTGGAGTGGGGTTATTGATGGCTGTGAGCTTATGGGTTATAAGAAGCATTGGGGCACCT
TCAACTGATATAGCTGTTTCAGAGCTAACTCATGCATCTGCTGAAGTTAGTGAAATAGTG
TTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATTGTTGATGCTCATCAAGGGTTTAAG
CTGGTTACTGACAATATAACAACTCGCAAGCCACAAACTCTACTTTGGGTGGTTGGTTTT
GTGACTTTTTTCCTCAGTTCGATCCTTGACAACCTGACGACCACCATTATCATGGTTTCC
TTATTGAGAAAACTGGTGCCTCCATCAGAATTCCGCAAGTTCCTAGGAGCAGTTGTTGTG
ATAGCCGCAAATGCTGGTGGTGCTTGGACTCCCATTGGTGATGTTACCACTACTATGCTG
TGGATTCATGGTCAGATATCCACATTGCAGACAATGAAGGGTTTGTTTATACCTTCTGCT
GTTTCTCTGGCTGTCCCGCTGGCTCTTATGTCCCTCACTAGTGAAGTTAATGGGAAAGGA
CAGGATTCTCCCAATGTTTTGGCATCTGAACAGATGGCTCCAAGAGGACAGCTTGTTTTC
GCTGTTGGAGTTGGAGCTTTGGTGTTTGTTCCAGTGTTCAAGGCTGTGACTGGTTTGCCT
CCTTTTATGGGTATTCTGCTTGGGCTTGGAGTTCTTTGGATTCTGACAGATGCCATTCAT
TATGGTGAATCGGAAAGACAAAGATTGAAAGTTCCACAGGCTTTATCACGCATTGACACT
CAAGGAGCCCTTTTCTTCCTTGGAATCCTTTTATCTGTCAGCAGTCTCGAGGCAGCAGGG
ATTCTCCGGGAATTAGCAAATTACCTTGATGCACATATCCCTAATGTTGAACTTATTGCA
AGTTCAATAGGTGTCGTGTCAGCAATTATAGACAATGTTCCACTGGTTGCAGCGACAATG
GGAATGTATGACCTTACCTCATACCCCCAAGACTCTGAGTTCTGGCAGCTGATTGCCTAT
TGTGCTGGTACGGGTGGATCCATGCTAGTTATTGGCTCTGCTGCTGGAGTTGCATTTATG
GGGATGGAAAAAGTGGACTTCTTTTGGTACTTAAGGAAGGTGAGTGGGTTTGCCTTTGCA
GGCTATGCTGCTGGTATTGCTGCCTACCTAGCACTTCATAACCTCCACATTTCCACAACT
CTAGCTCATGTTCCTTTCTTCTCTGGTTCATAA

Peptide Sequence

PEP ID

VIT_03s0180g00120.t01
PEP Infomation

pep chromosome:12X:3:6037870:6059709:1 gene:VIT_03s0180g00120 transcript:VIT_03s0180g00120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASFSISTSLSPSHSLSKRSPLSPAYSRPWVPSHPRLNSSTWRFRPPKLNARLENKPGDP
PSTPREAQSLSDKQLQELTPSSGSCDPLCSVDETSSQDFEATYQPKTDLLKALAILAAAT
TGAVAINQSWVAANQDAAMALLFGVGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAP
STDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPQTLLWVVGF
VTFFLSSILDNLTTTIIMVSLLRKLVPPSEFRKFLGAVVVIAANAGGAWTPIGDVTTTML
WIHGQISTLQTMKGLFIPSAVSLAVPLALMSLTSEVNGKGQDSPNVLASEQMAPRGQLVF
AVGVGALVFVPVFKAVTGLPPFMGILLGLGVLWILTDAIHYGESERQRLKVPQALSRIDT
QGALFFLGILLSVSSLEAAGILRELANYLDAHIPNVELIASSIGVVSAIIDNVPLVAATM
GMYDLTSYPQDSEFWQLIAYCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFA
GYAAGIAAYLALHNLHISTTLAHVPFFSGS

Transcript Sequence

Transcript ID

VIT_03s0180g00120.t01
Transcript Infomation

cdna chromosome:12X:3:6037870:6059709:1 gene:VIT_03s0180g00120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCTGATTCCACAGATGCTGGGGGAGTGGATATAGGCAAAAAGTTGCATCCATCGTCCATT
CAACTGGGTTGAGTCCTCACTCCATAGTGGTTCTTGGCTGTAGCATCTCCTCATCTTCTG
CAAGCCCTAGCTGAGCTCCAATGGCTTCCTTCTCAATCTCCACCAGCCTCTCTCCTTCAC
ACTCACTCTCAAAACGATCACCTCTGTCACCTGCTTACTCTCGTCCTTGGGTCCCATCTC
ACCCTCGTCTTAACTCCTCTACTTGGAGGTTCAGACCTCCGAAATTGAACGCCCGACTCG
AAAACAAGCCCGGAGACCCACCCTCCACCCCGCGAGAGGCCCAATCCTTGTCTGACAAAC
AGCTTCAGGAACTGACACCATCATCTGGATCATGTGATCCCCTATGTTCTGTTGATGAAA
CAAGCTCACAAGATTTTGAAGCCACATACCAGCCAAAGACCGATTTGCTGAAAGCTCTTG
CAATTCTTGCAGCAGCTACAACAGGGGCAGTTGCAATTAATCAGTCGTGGGTTGCTGCTA
ATCAGGATGCTGCTATGGCATTGCTATTTGGAGTGGGATATGCTGGAATAATTTTTGAAG
AATCTCTAGCCTTTAACAAAAGTGGAGTGGGGTTATTGATGGCTGTGAGCTTATGGGTTA
TAAGAAGCATTGGGGCACCTTCAACTGATATAGCTGTTTCAGAGCTAACTCATGCATCTG
CTGAAGTTAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATTGTTG
ATGCTCATCAAGGGTTTAAGCTGGTTACTGACAATATAACAACTCGCAAGCCACAAACTC
TACTTTGGGTGGTTGGTTTTGTGACTTTTTTCCTCAGTTCGATCCTTGACAACCTGACGA
CCACCATTATCATGGTTTCCTTATTGAGAAAACTGGTGCCTCCATCAGAATTCCGCAAGT
TCCTAGGAGCAGTTGTTGTGATAGCCGCAAATGCTGGTGGTGCTTGGACTCCCATTGGTG
ATGTTACCACTACTATGCTGTGGATTCATGGTCAGATATCCACATTGCAGACAATGAAGG
GTTTGTTTATACCTTCTGCTGTTTCTCTGGCTGTCCCGCTGGCTCTTATGTCCCTCACTA
GTGAAGTTAATGGGAAAGGACAGGATTCTCCCAATGTTTTGGCATCTGAACAGATGGCTC
CAAGAGGACAGCTTGTTTTCGCTGTTGGAGTTGGAGCTTTGGTGTTTGTTCCAGTGTTCA
AGGCTGTGACTGGTTTGCCTCCTTTTATGGGTATTCTGCTTGGGCTTGGAGTTCTTTGGA
TTCTGACAGATGCCATTCATTATGGTGAATCGGAAAGACAAAGATTGAAAGTTCCACAGG
CTTTATCACGCATTGACACTCAAGGAGCCCTTTTCTTCCTTGGAATCCTTTTATCTGTCA
GCAGTCTCGAGGCAGCAGGGATTCTCCGGGAATTAGCAAATTACCTTGATGCACATATCC
CTAATGTTGAACTTATTGCAAGTTCAATAGGTGTCGTGTCAGCAATTATAGACAATGTTC
CACTGGTTGCAGCGACAATGGGAATGTATGACCTTACCTCATACCCCCAAGACTCTGAGT
TCTGGCAGCTGATTGCCTATTGTGCTGGTACGGGTGGATCCATGCTAGTTATTGGCTCTG
CTGCTGGAGTTGCATTTATGGGGATGGAAAAAGTGGACTTCTTTTGGTACTTAAGGAAGG
TGAGTGGGTTTGCCTTTGCAGGCTATGCTGCTGGTATTGCTGCCTACCTAGCACTTCATA
ACCTCCACATTTCCACAACTCTAGCTCATGTTCCTTTCTTCTCTGGTTCATAAATCATGG
TGCTCAGATTTTGATGCTTTCTGGCTCCCCAAATGGCAGTGTACATCACAAATTGTGGTG
GCTCACATGATATTGGCATGACAATATTATGGGACCATTCTAATTAGACCCAGAGATGCA
GATTGTGGCAACTTTTATGGAAAAAAAAAATATAATGCTGCCAAGAGTCTAATAATATTC
TCTTTCCTGCTAAGAAAGCAGCCCTGAAGGAAGCATGTATGAAGTGCACT