Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0180g00080.t01
CDS Infomation

cds chromosome:12X:3:6009317:6020720:-1 gene:VIT_03s0180g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAATCTTCAGTACTGCTTTTGCTACTCTGCGCCGCGGTGCTCACTGTGGTCACCTTG
GCTTCCGAAGCGTATCCCTCTGGCTACGATACCGCTTCCTGCGACGTTGACCTGCTCCCC
GTCAGACAAGAAGTCTACGACGGTGGGCGCATCTTCGACATCAGTCACCGATACACGCCT
GATATGCCGTCCTTTGATTCCGATGAGGGAATCGGTCAGTTCCTGTGGCTGCCCCAGAGT
ATGAAGAACGGATCGATTGCCAATAATTCTGAAATGAAGATGCAGACTCACACCGGCACG
CACGTCGACGCCCCGGGTCACGTCTTCGATCACTACTTCGACGCCGGCTTCGATGTCGAT
ACTCTTGACCTTGAAGTTCTCAATGGTCCTGCTCTGCTAGTTGATGTTCCAAGGAATAAG
AACATAACCGCTGAAGTTATGGAGTCCTTAAATATTCCTAAGGGAGTACGTCGTGTGCTT
TTCAGGACATTAAACACGGACAGGCGACTTATGTTCACAAAGAAATTTGACACAAGCTAT
GTGGGATTCACACAGGATGGGGCAAAATGGCTAGTGGAGAATACTAACATTAAACTTGTT
GGGATTGATTACTTATCTGTTGCTGCATATTCTGATTTACTTTCTGCTCATTATGCTTTT
CTTAAAGGCAGGGAAACCATTCTTGTGGAAGGCCTGAAACTGGACGACATCAAACCTGGA
ATATATTCGGTCCATTGCCTACCTCTGAGGTTGTTTGGTGCTGAGGGGTCCCCTATAAGA
TGCATTCTCATCAAGGGTTAA

Peptide Sequence

PEP ID

VIT_03s0180g00080.t01
PEP Infomation

pep chromosome:12X:3:6009317:6020720:-1 gene:VIT_03s0180g00080 transcript:VIT_03s0180g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKSSVLLLLLCAAVLTVVTLASEAYPSGYDTASCDVDLLPVRQEVYDGGRIFDISHRYTP
DMPSFDSDEGIGQFLWLPQSMKNGSIANNSEMKMQTHTGTHVDAPGHVFDHYFDAGFDVD
TLDLEVLNGPALLVDVPRNKNITAEVMESLNIPKGVRRVLFRTLNTDRRLMFTKKFDTSY
VGFTQDGAKWLVENTNIKLVGIDYLSVAAYSDLLSAHYAFLKGRETILVEGLKLDDIKPG
IYSVHCLPLRLFGAEGSPIRCILIKG

Transcript Sequence

Transcript ID

VIT_03s0180g00080.t01
Transcript Infomation

cdna chromosome:12X:3:6009317:6020720:-1 gene:VIT_03s0180g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCGGTGCTGGGCAGTGGCAAGCGCCGAGAAGGAAGTTTCCTGCATATTGTAGGGCATA
GGCCCTCGCACTAACAAGTAGATTCTCATTGCTAATCGCCATGAAATCTTCAGTACTGCT
TTTGCTACTCTGCGCCGCGGTGCTCACTGTGGTCACCTTGGCTTCCGAAGCGTATCCCTC
TGGCTACGATACCGCTTCCTGCGACGTTGACCTGCTCCCCGTCAGACAAGAAGTCTACGA
CGGTGGGCGCATCTTCGACATCAGTCACCGATACACGCCTGATATGCCGTCCTTTGATTC
CGATGAGGGAATCGGTCAGTTCCTGTGGCTGCCCCAGAGTATGAAGAACGGATCGATTGC
CAATAATTCTGAAATGAAGATGCAGACTCACACCGGCACGCACGTCGACGCCCCGGGTCA
CGTCTTCGATCACTACTTCGACGCCGGCTTCGATGTCGATACTCTTGACCTTGAAGTTCT
CAATGGTCCTGCTCTGCTAGTTGATGTTCCAAGGAATAAGAACATAACCGCTGAAGTTAT
GGAGTCCTTAAATATTCCTAAGGGAGTACGTCGTGTGCTTTTCAGGACATTAAACACGGA
CAGGCGACTTATGTTCACAAAGAAATTTGACACAAGCTATGTGGGATTCACACAGGATGG
GGCAAAATGGCTAGTGGAGAATACTAACATTAAACTTGTTGGGATTGATTACTTATCTGT
TGCTGCATATTCTGATTTACTTTCTGCTCATTATGCTTTTCTTAAAGGCAGGGAAACCAT
TCTTGTGGAAGGCCTGAAACTGGACGACATCAAACCTGGAATATATTCGGTCCATTGCCT
ACCTCTGAGGTTGTTTGGTGCTGAGGGGTCCCCTATAAGATGCATTCTCATCAAGGGTTA
ATTTTCTCATAGATTTTACAATGTAAGCGGTTTGCCACGAGAAGTCTGGGGATCTGTTAC
CACTTACCATCTCTACTAGGTAATCCGGAAATTCATGCCCATGACATATTCATGCGGCTT
ATTACCTAAAATCTTTTCCATGTGCCATGCTGCTTATTGTATGTGAATTGAAACACAGAA
TTCCCTTTGACATATTCCTTTCATTTGAGTGGC