Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0180g00040.t01
CDS Infomation

cds chromosome:12X:3:5973785:5975813:1 gene:VIT_03s0180g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAATAAATCAACATCATCAACAAACACCACCACAGCCCCCCAACTCGTCTTCTTTT
TTATTGGATGCTCTCTACTGTGAGGAGGAGAGATGGGAGGAGGAAGAAGAAGATGAGTGT
TTGCAGGAGGAAGCCTGTGAGAAATATGGCAATGTTGATAATGATGGGATAGACCCTTCA
TCTACTCTTCTTCCTCTGCTGTTGCTGGAACAGGATTTGTTCTGGGAAGATGAGGAGCTT
CTGTCTCTCTTCTCCAAAGAAGAGCAGCAAGCGAGTCTCGGTGCCGGCAATGGTGAAATG
GATGGTGCTCTCGCTGTAGCTCGGCGTCAGGCCGTGGAGTGGATGATGAAGGTCAATGCC
CATTACGGATTCTCAGCTGTAACTGCGATTCTCGCCATTAACTACTTGGATAGGTTCCTT
TCAAGCCTCCATTTTCAGAGAGATAAGCCATGGATGATCCAGCTAGCAGCTGTGACTTGT
CTCTCCTTGGCTGCCAAGGTGGAAGAGACCCAAGTGCCTCTCCTCCTAGACCTGCAAGTG
GAGGACAGCAAGTATGTGTTTGAAGCGAAAACAATTCAGAGAATGGAGCTTCTGGTGCTC
TCAACTCTTCAATGGAAGATGAACCCAGTCACCCCACTCTCCTTCATTGATCACATCATA
AGAAGGCTTGGATTGAAGACCCATCTCCACTGGGAGTTTCTCCGCCTATGCGAGCGTTTT
CTCCTCTCTGTCGTCGCCGATTCGAGGTTCGTCCGTTACCTTCCTTCTGTATTGGCTACT
GCAACAATGCTTCACGTAATAAATCATGTTGAGCCCTGCAATCCTATTGAATACCAAAAC
CAGCTTCTGGGAATCCTCAAAATCGACAAGGATAAAGTGACTGAATGCCATCAACTCATT
GTGGAAGTATCAAACACCCATTTCTATGCTCAAAACAACCCTCACAAGCGCAAGTACACC
AAAATTCCTGGCAGCCCAAATGGTGTGATGGATGCATATTTCAGCTGTGATAGCTCAAAC
GATTCTTGGGCTGTGGAATCATCAGTGTCCTCTTCACCGGTCGACCCTCTCTTCAAGAAA
AGCAGAACCCAGGAGCAGCAGATGCGGTTGCCATCACTGAACCGTGTCTTTGTGGATGTC
ATTGGCAGCAGTCCTCGTTAA

Peptide Sequence

PEP ID

VIT_03s0180g00040.t01
PEP Infomation

pep chromosome:12X:3:5973785:5975813:1 gene:VIT_03s0180g00040 transcript:VIT_03s0180g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAINQHHQQTPPQPPNSSSFLLDALYCEEERWEEEEEDECLQEEACEKYGNVDNDGIDPS
STLLPLLLLEQDLFWEDEELLSLFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNA
HYGFSAVTAILAINYLDRFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQV
EDSKYVFEAKTIQRMELLVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERF
LLSVVADSRFVRYLPSVLATATMLHVINHVEPCNPIEYQNQLLGILKIDKDKVTECHQLI
VEVSNTHFYAQNNPHKRKYTKIPGSPNGVMDAYFSCDSSNDSWAVESSVSSSPVDPLFKK
SRTQEQQMRLPSLNRVFVDVIGSSPR

Transcript Sequence

Transcript ID

VIT_03s0180g00040.t01
Transcript Infomation

cdna chromosome:12X:3:5973785:5975813:1 gene:VIT_03s0180g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCTCTTTCTACTTTGATACTCTCTCTCTTTGTGTATCTCTTTCTTTCTCTCTCTCTAG
TCTCTGCGGTCTGCAAACAGAGATAGAGAAAGTGAAGAGAGATGTGTATGGTGGGGGGTG
TAAGCTTTTCTTTTGTATAATGAGAAGAGGACTCAAACCTCTTCTTCTCAGAAGAAGATG
GCAATAAATCAACATCATCAACAAACACCACCACAGCCCCCCAACTCGTCTTCTTTTTTA
TTGGATGCTCTCTACTGTGAGGAGGAGAGATGGGAGGAGGAAGAAGAAGATGAGTGTTTG
CAGGAGGAAGCCTGTGAGAAATATGGCAATGTTGATAATGATGGGATAGACCCTTCATCT
ACTCTTCTTCCTCTGCTGTTGCTGGAACAGGATTTGTTCTGGGAAGATGAGGAGCTTCTG
TCTCTCTTCTCCAAAGAAGAGCAGCAAGCGAGTCTCGGTGCCGGCAATGGTGAAATGGAT
GGTGCTCTCGCTGTAGCTCGGCGTCAGGCCGTGGAGTGGATGATGAAGGTCAATGCCCAT
TACGGATTCTCAGCTGTAACTGCGATTCTCGCCATTAACTACTTGGATAGGTTCCTTTCA
AGCCTCCATTTTCAGAGAGATAAGCCATGGATGATCCAGCTAGCAGCTGTGACTTGTCTC
TCCTTGGCTGCCAAGGTGGAAGAGACCCAAGTGCCTCTCCTCCTAGACCTGCAAGTGGAG
GACAGCAAGTATGTGTTTGAAGCGAAAACAATTCAGAGAATGGAGCTTCTGGTGCTCTCA
ACTCTTCAATGGAAGATGAACCCAGTCACCCCACTCTCCTTCATTGATCACATCATAAGA
AGGCTTGGATTGAAGACCCATCTCCACTGGGAGTTTCTCCGCCTATGCGAGCGTTTTCTC
CTCTCTGTCGTCGCCGATTCGAGGTTCGTCCGTTACCTTCCTTCTGTATTGGCTACTGCA
ACAATGCTTCACGTAATAAATCATGTTGAGCCCTGCAATCCTATTGAATACCAAAACCAG
CTTCTGGGAATCCTCAAAATCGACAAGGATAAAGTGACTGAATGCCATCAACTCATTGTG
GAAGTATCAAACACCCATTTCTATGCTCAAAACAACCCTCACAAGCGCAAGTACACCAAA
ATTCCTGGCAGCCCAAATGGTGTGATGGATGCATATTTCAGCTGTGATAGCTCAAACGAT
TCTTGGGCTGTGGAATCATCAGTGTCCTCTTCACCGGTCGACCCTCTCTTCAAGAAAAGC
AGAACCCAGGAGCAGCAGATGCGGTTGCCATCACTGAACCGTGTCTTTGTGGATGTCATT
GGCAGCAGTCCTCGTTAATCTCTCTACAAGAGCATATATATATATATAATTATTCTATTA
TGTCTATTATGGTGCAAGTTTAATTGTCTGCCATCTCTGGACTTCCACTATGAAGCTCTT
CAACATGTCTCAAAGAGAGTTTTGCACTGCGGAGAATGGCTGGCATTTCCGAACAGAAAG
GACTAGAGAGTATTATCTGCTCTTTCTCCGCTTAATGCTGCTATGAGATATGTCTTCTCT
GTAACTCTCTTTTGAGTCTCTTCCCAGTTCCCAGTTCCCAACATACTTTTTATATGGACA
TATATATTTTATATTTTTATCATAAATTCAAAACATTTTTGGCCA