Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0167g00190.t01
CDS Infomation

cds chromosome:12X:3:12545432:12547480:1 gene:VIT_03s0167g00190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCTTTTACAGTTAAGGTGTTCATATCTCTAGCTTTGGCGGGTGTTCTTGGACTG
TTCTTTCGCCTGTATAATGCCCTGGTGGTTAAGCCGGAGAAGCTGAGATCTATTCTGAGG
AGCCAAGGGATCAGTGGCCCGCCACCGTCTTTTCTGCTCGGCAACATAAGGGAGATCAAG
AAGTCACGGTCCACGGCAGTGAAGGACTCCTCCACCGACACCCACAACTGTGCTGCTGCT
CTATTCCCCTTTTTCGAGCAGTGGCGAAACAAATATGGTCAAGTGTTCATGTTTTCACTT
GGTAACACACAAATATTACATGCGAATCAACCTGATATTGTTAGAGAAATTACTACATGC
TCATCCTTGGACTTTGGGAAGCCCTCATACCTACAGAGAGAGTTCGGTCCTTTGCTCGGC
CAGGGCATTCTAACCTCGAATGGAGCTGTCTGGGCTCATAATAGAAAAATCCTTGCTCCT
GAATTGTACATGGAGAAGGTCAAGGGAATGATAGGCCTAATTACTGAGTCCGTAGACACA
CTGTTGAACTCATGGAGGAGTAAGATCGAGGCAGAGGGTGGAATTGCAGACATAAGAATC
GACGAGCACATGAAAAGCTTCTCAGGAGATGTGATCTCAAGGGCTTGTTTTGGTGGCAGT
TACACAAAAGGGGAAGAGATTTTCTTGAAGCTTAAAGCTCTCCAAGAGGCCATGTCCAAG
AAAGCTTTTTCGTTTATTCCCGGAATGCGATATATTCCTATCAAGCGCAACAGAGATGCT
TGGGCACTACAAAAGGATGTCCGGAATTTGATTCTAAAGGTAGTGAGTGAGAGAAAGGAG
TTAGCTGCCCATGAAAAAGACCTGCTGCAGATGGTCCTTGAGGGAGCTAAGAAAAGCGAA
CTAAGCCAAGAAGCAACAGACAACTTCATTGTCGATAACTGCAAGAACATCTACTTGGCT
GGCTATGAGACCACTGCGGTGTCCGCTGTATGGTGCCTCATGCTCCTGGCTGCAAATCCT
GATTGGCAGGCTCGGGTTCGGGAAGAAGTAGTCGAAATCTGTAAGGGCAGAACACCAGAT
GCGGATATGATCCGCAAAATGAAACAGATGACGATGGTGATCTACGAATCACTGCGACTC
TACCCGCCAGTACCGGTGATGTCGAGGGAGGCCTTAGCGGACATGAAATTCGGAGGCATC
CATGTGCCAAAGGGGGTGAATGTATGGAACCTGGTGGTGACACTGCACACAGACCCGGAA
AATTGGGGACCTGACGCGCTTAAGTTCAACCCTGAGAGGTTCAAAAATGGGATCACAGGT
GCCTGCAAGCTCCCACACTTGTACATGCCGTTCGGGGTTGGTCCAAGGGTGTGCCTTGGC
CAGAATTTGGCCATGGTTGAGCTCAAGATACTGATAAGTCTGATACTGTCCAATTTTTCA
TTCTCCCTTTCTCCTAATTATAAACACTCAGCTGCACTCAGGCTGTTGATAGAACCTGAG
AATGGAGTCAATCTCTTGGTAAAGAAGTTGTGA

Peptide Sequence

PEP ID

VIT_03s0167g00190.t01
PEP Infomation

pep chromosome:12X:3:12545432:12547480:1 gene:VIT_03s0167g00190 transcript:VIT_03s0167g00190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAFTVKVFISLALAGVLGLFFRLYNALVVKPEKLRSILRSQGISGPPPSFLLGNIREIK
KSRSTAVKDSSTDTHNCAAALFPFFEQWRNKYGQVFMFSLGNTQILHANQPDIVREITTC
SSLDFGKPSYLQREFGPLLGQGILTSNGAVWAHNRKILAPELYMEKVKGMIGLITESVDT
LLNSWRSKIEAEGGIADIRIDEHMKSFSGDVISRACFGGSYTKGEEIFLKLKALQEAMSK
KAFSFIPGMRYIPIKRNRDAWALQKDVRNLILKVVSERKELAAHEKDLLQMVLEGAKKSE
LSQEATDNFIVDNCKNIYLAGYETTAVSAVWCLMLLAANPDWQARVREEVVEICKGRTPD
ADMIRKMKQMTMVIYESLRLYPPVPVMSREALADMKFGGIHVPKGVNVWNLVVTLHTDPE
NWGPDALKFNPERFKNGITGACKLPHLYMPFGVGPRVCLGQNLAMVELKILISLILSNFS
FSLSPNYKHSAALRLLIEPENGVNLLVKKL

Transcript Sequence

Transcript ID

VIT_03s0167g00190.t01
Transcript Infomation

cdna chromosome:12X:3:12545432:12547480:1 gene:VIT_03s0167g00190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAGAGTTAGGGTTTCGGAAATGGAGGCTTTTACAGTTAAGGTGTTCATATCTCTAGCT
TTGGCGGGTGTTCTTGGACTGTTCTTTCGCCTGTATAATGCCCTGGTGGTTAAGCCGGAG
AAGCTGAGATCTATTCTGAGGAGCCAAGGGATCAGTGGCCCGCCACCGTCTTTTCTGCTC
GGCAACATAAGGGAGATCAAGAAGTCACGGTCCACGGCAGTGAAGGACTCCTCCACCGAC
ACCCACAACTGTGCTGCTGCTCTATTCCCCTTTTTCGAGCAGTGGCGAAACAAATATGGT
CAAGTGTTCATGTTTTCACTTGGTAACACACAAATATTACATGCGAATCAACCTGATATT
GTTAGAGAAATTACTACATGCTCATCCTTGGACTTTGGGAAGCCCTCATACCTACAGAGA
GAGTTCGGTCCTTTGCTCGGCCAGGGCATTCTAACCTCGAATGGAGCTGTCTGGGCTCAT
AATAGAAAAATCCTTGCTCCTGAATTGTACATGGAGAAGGTCAAGGGAATGATAGGCCTA
ATTACTGAGTCCGTAGACACACTGTTGAACTCATGGAGGAGTAAGATCGAGGCAGAGGGT
GGAATTGCAGACATAAGAATCGACGAGCACATGAAAAGCTTCTCAGGAGATGTGATCTCA
AGGGCTTGTTTTGGTGGCAGTTACACAAAAGGGGAAGAGATTTTCTTGAAGCTTAAAGCT
CTCCAAGAGGCCATGTCCAAGAAAGCTTTTTCGTTTATTCCCGGAATGCGATATATTCCT
ATCAAGCGCAACAGAGATGCTTGGGCACTACAAAAGGATGTCCGGAATTTGATTCTAAAG
GTAGTGAGTGAGAGAAAGGAGTTAGCTGCCCATGAAAAAGACCTGCTGCAGATGGTCCTT
GAGGGAGCTAAGAAAAGCGAACTAAGCCAAGAAGCAACAGACAACTTCATTGTCGATAAC
TGCAAGAACATCTACTTGGCTGGCTATGAGACCACTGCGGTGTCCGCTGTATGGTGCCTC
ATGCTCCTGGCTGCAAATCCTGATTGGCAGGCTCGGGTTCGGGAAGAAGTAGTCGAAATC
TGTAAGGGCAGAACACCAGATGCGGATATGATCCGCAAAATGAAACAGATGACGATGGTG
ATCTACGAATCACTGCGACTCTACCCGCCAGTACCGGTGATGTCGAGGGAGGCCTTAGCG
GACATGAAATTCGGAGGCATCCATGTGCCAAAGGGGGTGAATGTATGGAACCTGGTGGTG
ACACTGCACACAGACCCGGAAAATTGGGGACCTGACGCGCTTAAGTTCAACCCTGAGAGG
TTCAAAAATGGGATCACAGGTGCCTGCAAGCTCCCACACTTGTACATGCCGTTCGGGGTT
GGTCCAAGGGTGTGCCTTGGCCAGAATTTGGCCATGGTTGAGCTCAAGATACTGATAAGT
CTGATACTGTCCAATTTTTCATTCTCCCTTTCTCCTAATTATAAACACTCAGCTGCACTC
AGGCTGTTGATAGAACCTGAGAATGGAGTCAATCTCTTGGTAAAGAAGTTGTGAAGGAAG