Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0167g00110.t01
CDS Infomation

cds chromosome:12X:3:12333546:12335636:-1 gene:VIT_03s0167g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGTTTCCAACACAGGGATTACACAACTGCCAACACAAAAACTTCTTTTCTTTCAT
CTTTTCATGATTTCCGTTTCCTTCTTCCTAATATTCCCTTGTGCAACCTCGTTATCCTTC
AACTTCACCGGCTTTGATCGGAACAAAGGTCAAATATACTTCGAGAAAGATGCTTTTGTT
TCTCCGGATCAAGTCATCCAACTAACCAGAAACCTTCAGAATGCTGCAATGAATTATAGT
TGGGGTCGGGCCACGTATATGAAGCAATTGCACCTCTGGGATAAGGTCTCCGGAAATCTC
ACTGATTTCACTACCAGTTTCACCTTTGTCATTGATTCGCAGAAGAACAATCGGTATGGT
GATGGGCTCGCGTTCTTCCTTGCTCCCAATCGCGCACAGTTGCCTTCAAAAATGACAGGA
GGTAGCGGCCTTGGTATTGTAAGTCCCAGCCAGGCGTTGAACACTAGAAAAAACCGTTTT
GTTGCAGTGGAATTCGATACTTATCGAAACGATTGGGACCCAAGGTACCCAATAAAGGAT
CATGTTGGTATCAATATCAACTCCATGAAATCTGTCAAAAATGCCGCATGGTTGAGTAAT
ATTCCGGAAGGTCAAACAAATCATGCTTCCATCAAGTATACCTCTGGTACCAAGAATCTG
AGTGTTGTTTTAAGGACTGGTAGGGGTAATACAAGTTCCATACAAAGTCTTTATTACATA
GTTGATTTACGGAAATACTTGCCAGAATTCGCAACTGTTGGCATCTCAGCTGCAACGGGA
AGGTATTTTGAGATACACGGCATTCATTCGTGGAGTTTTAATTCAACTCTAGAAACTCTT
CCGCATCCTCCAGAAACAGGAGCTGAAATTCCCAATCCCCCGGAAACAGTAGCTGAACCC
CCCAATCTTCCAAAAATTGGAGATGAAAATAATAAAGGACTAGTGGTGGGATTGGGTGTT
TGTGCATTTGTTGTGGTGGTTGGGTTGGGTGGGACTGTGTTTTACTTGTGCAGGAAGAAG
AACGAAGGGGGAATTGAAGATGATAATGATTTTGACCTGGCAATGGACCACGAATTTGAG
AAGGGCACTGGACCTAGGAAGTTTTCATTTGATGAATTAGCTCTTGCCACAAGTAACTTT
TCAGAGGGAGAGAAGCTTGGAGAGGGAGGGTTTGGTAGGGTTTATAGAGGTTTCTTAAGA
GAACGGAGCTCCTATATTGCTGTTAAGAGGATATCAAGGAGGTCTAAACAAGGGATGAAG
GAGTACGCATCTGAAGTAAAGATCATCAGTAGATTAAGGCATCGAAACTTGGTGCAGCTC
ATGGGCTGGTGCCATAAAAAGGGAGAGCTCCTAATGGTTTACGAATTCATGCCTAACAAC
AGTTTGGATTCTTGTTTGTTTGAAGCAAAAACCTTGTTGAGATGGGCCATGAGGTACAAA
ATTGCTGTTGGATTGGCTTTGGCAGTGCTCTACCTTCATGAAGAATGGGAACAATGTGTG
GTACATAGGGATATCAAATCGAGTAATGTGATGTTGGATTCAGATTTCAATGCTAAGCTC
GGAGATTTTGGACTGGCTAGGTTTGTTGATCATGGGAAAGGGTCACAAACCACAGTTTTA
GCTGGGACCATGGGGTACATGGCTCCTGAATGTTTCATGACCAGCAAGGCCAGCAAGGAA
TCCGATGTCTACAGTTTTGGGGTTGTTGTGTTAGAAATTTGCTGTGGCAGAAGATCGGTG
GAACCCAAGGCTAAAGAAAATCAGATCAGATTGGTGGAGTGGGTTTGGGACCTCTATGGA
GTAGGAAAGCTTCTTGAAGCAGCTGATCCAAGACTATCTGCAGATTTTGATGAGCAACAA
ATGAAACGATTGATGACTGTAGGGCTTTGGTGTGCTCATCCAGATTGCAATCTTCGCCCT
TCGATAAGGCAAGCGATTAATGTCCTTAACTTCGAAGCATCGCTGCCCATTCTCCCTTCA
AAGATGCCAGTGCCAATGTATTTTTCTCCTCCAGTAAATACGCCTGCATTTTGGCCTACA
ACTTCCTATAATGCTACTAGCACTTCTGGAATAGGCCAAACCAAGTTTTAG

Peptide Sequence

PEP ID

VIT_03s0167g00110.t01
PEP Infomation

pep chromosome:12X:3:12333546:12335636:-1 gene:VIT_03s0167g00110 transcript:VIT_03s0167g00110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVSNTGITQLPTQKLLFFHLFMISVSFFLIFPCATSLSFNFTGFDRNKGQIYFEKDAFV
SPDQVIQLTRNLQNAAMNYSWGRATYMKQLHLWDKVSGNLTDFTTSFTFVIDSQKNNRYG
DGLAFFLAPNRAQLPSKMTGGSGLGIVSPSQALNTRKNRFVAVEFDTYRNDWDPRYPIKD
HVGININSMKSVKNAAWLSNIPEGQTNHASIKYTSGTKNLSVVLRTGRGNTSSIQSLYYI
VDLRKYLPEFATVGISAATGRYFEIHGIHSWSFNSTLETLPHPPETGAEIPNPPETVAEP
PNLPKIGDENNKGLVVGLGVCAFVVVVGLGGTVFYLCRKKNEGGIEDDNDFDLAMDHEFE
KGTGPRKFSFDELALATSNFSEGEKLGEGGFGRVYRGFLRERSSYIAVKRISRRSKQGMK
EYASEVKIISRLRHRNLVQLMGWCHKKGELLMVYEFMPNNSLDSCLFEAKTLLRWAMRYK
IAVGLALAVLYLHEEWEQCVVHRDIKSSNVMLDSDFNAKLGDFGLARFVDHGKGSQTTVL
AGTMGYMAPECFMTSKASKESDVYSFGVVVLEICCGRRSVEPKAKENQIRLVEWVWDLYG
VGKLLEAADPRLSADFDEQQMKRLMTVGLWCAHPDCNLRPSIRQAINVLNFEASLPILPS
KMPVPMYFSPPVNTPAFWPTTSYNATSTSGIGQTKF

Transcript Sequence

Transcript ID

VIT_03s0167g00110.t01
Transcript Infomation

cdna chromosome:12X:3:12333546:12335636:-1 gene:VIT_03s0167g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGTTTCCAACACAGGGATTACACAACTGCCAACACAAAAACTTCTTTTCTTTCAT
CTTTTCATGATTTCCGTTTCCTTCTTCCTAATATTCCCTTGTGCAACCTCGTTATCCTTC
AACTTCACCGGCTTTGATCGGAACAAAGGTCAAATATACTTCGAGAAAGATGCTTTTGTT
TCTCCGGATCAAGTCATCCAACTAACCAGAAACCTTCAGAATGCTGCAATGAATTATAGT
TGGGGTCGGGCCACGTATATGAAGCAATTGCACCTCTGGGATAAGGTCTCCGGAAATCTC
ACTGATTTCACTACCAGTTTCACCTTTGTCATTGATTCGCAGAAGAACAATCGGTATGGT
GATGGGCTCGCGTTCTTCCTTGCTCCCAATCGCGCACAGTTGCCTTCAAAAATGACAGGA
GGTAGCGGCCTTGGTATTGTAAGTCCCAGCCAGGCGTTGAACACTAGAAAAAACCGTTTT
GTTGCAGTGGAATTCGATACTTATCGAAACGATTGGGACCCAAGGTACCCAATAAAGGAT
CATGTTGGTATCAATATCAACTCCATGAAATCTGTCAAAAATGCCGCATGGTTGAGTAAT
ATTCCGGAAGGTCAAACAAATCATGCTTCCATCAAGTATACCTCTGGTACCAAGAATCTG
AGTGTTGTTTTAAGGACTGGTAGGGGTAATACAAGTTCCATACAAAGTCTTTATTACATA
GTTGATTTACGGAAATACTTGCCAGAATTCGCAACTGTTGGCATCTCAGCTGCAACGGGA
AGGTATTTTGAGATACACGGCATTCATTCGTGGAGTTTTAATTCAACTCTAGAAACTCTT
CCGCATCCTCCAGAAACAGGAGCTGAAATTCCCAATCCCCCGGAAACAGTAGCTGAACCC
CCCAATCTTCCAAAAATTGGAGATGAAAATAATAAAGGACTAGTGGTGGGATTGGGTGTT
TGTGCATTTGTTGTGGTGGTTGGGTTGGGTGGGACTGTGTTTTACTTGTGCAGGAAGAAG
AACGAAGGGGGAATTGAAGATGATAATGATTTTGACCTGGCAATGGACCACGAATTTGAG
AAGGGCACTGGACCTAGGAAGTTTTCATTTGATGAATTAGCTCTTGCCACAAGTAACTTT
TCAGAGGGAGAGAAGCTTGGAGAGGGAGGGTTTGGTAGGGTTTATAGAGGTTTCTTAAGA
GAACGGAGCTCCTATATTGCTGTTAAGAGGATATCAAGGAGGTCTAAACAAGGGATGAAG
GAGTACGCATCTGAAGTAAAGATCATCAGTAGATTAAGGCATCGAAACTTGGTGCAGCTC
ATGGGCTGGTGCCATAAAAAGGGAGAGCTCCTAATGGTTTACGAATTCATGCCTAACAAC
AGTTTGGATTCTTGTTTGTTTGAAGCAAAAACCTTGTTGAGATGGGCCATGAGGTACAAA
ATTGCTGTTGGATTGGCTTTGGCAGTGCTCTACCTTCATGAAGAATGGGAACAATGTGTG
GTACATAGGGATATCAAATCGAGTAATGTGATGTTGGATTCAGATTTCAATGCTAAGCTC
GGAGATTTTGGACTGGCTAGGTTTGTTGATCATGGGAAAGGGTCACAAACCACAGTTTTA
GCTGGGACCATGGGGTACATGGCTCCTGAATGTTTCATGACCAGCAAGGCCAGCAAGGAA
TCCGATGTCTACAGTTTTGGGGTTGTTGTGTTAGAAATTTGCTGTGGCAGAAGATCGGTG
GAACCCAAGGCTAAAGAAAATCAGATCAGATTGGTGGAGTGGGTTTGGGACCTCTATGGA
GTAGGAAAGCTTCTTGAAGCAGCTGATCCAAGACTATCTGCAGATTTTGATGAGCAACAA
ATGAAACGATTGATGACTGTAGGGCTTTGGTGTGCTCATCCAGATTGCAATCTTCGCCCT
TCGATAAGGCAAGCGATTAATGTCCTTAACTTCGAAGCATCGCTGCCCATTCTCCCTTCA
AAGATGCCAGTGCCAATGTATTTTTCTCCTCCAGTAAATACGCCTGCATTTTGGCCTACA
ACTTCCTATAATGCTACTAGCACTTCTGGAATAGGCCAAACCAAGTTTTAG