Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0132g00230.t01
CDS Infomation

cds chromosome:12X:3:11685127:11703165:-1 gene:VIT_03s0132g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTCCGCCTCCACCTGGAAGCTTTATAGATCGTGAAGAACTTATCCAACATGTTGGG
GACTTTGCCTTATCCCAGGGCTATGTAGTTACCATTAAGCAGTCCAAGAAGGACAAAGTG
GTAGTGCTTGGTTGTGACAGAGGGGGTGTTTACCGTAACAGGCGTAAACTTGTTGATGAA
AGTTCTGCTGAACAGGTGCGCAAAAGAAAAACAGGTTCACGTCTTACAAATTGCCCTTTT
GAAGTCGTGGGTAAAAAGGAAGATGGCTTGTGGGTACTTGCCATTAAAAATGGAGAACAT
AACCATGATCCCATCAGGGACATTTCAGAACACCCTTCATCTCGTCGCTTCACTGAGAGA
GAAGTATTGCTTATTAAAGATATGACTGAAGCTGGTTTAAAACCGCGCCAAATTTTAAAG
AGACTGAGACAAAACAATCCGGAGCTTTTATCAACACCAAAGCATGTTTACAATGTTAAA
GCTAAGCTCCGACAAGGAAATTTAACAGTGAGGAACTTCAAGTCATTGAGAGTTAAATCA
TCTGTGGAAAATTCTCATATTTCAACAGCTAATGAGCCATCTTGGAGGCAACGCAATCCT
CCAAGGGTTCCCAATCTCATTGGAGGTAGATTTGTTGATTCACAGTCATTTGCATCCATT
GATGTTACAAATCCTGCAACACAGAAAGTTGTTTCTCAAGTCCCTTTAACCACCAATGAA
GAATTCAGAGCTGCAATATTTGCTGCAAAACGAGCTTTTCCTTCATGGCGAGACACACCA
GTTACCACCCGTCAACGTATCATGTTCAAATTCCAAGAACTCATTCGGAGAGATATTGAT
AAGATTGCTATGAATATTACTACTGAACATGGAAAGACATTGAAGGATGCTTACACTGAT
GTACACCGTGGACTTGAGGTGGTGGAACATGCTTGTGGAATGGCGACTCTACAAATGGGG
GAATTTGTTTCAAATGTATCAAATGGAATTGATACCTATAGCATTAGAGAGCCACTTGGT
GTCTGTGCAGGGATTTGTCCATTCGATTTTCCAGCAATGATTCCCTTATGGATGTTTCCA
ATTGCAGTTACTTGTGGCAATACGTTCATTCTAAAGCCATCAGAGAAGGATCCAGGGGCT
ACTATTATACTTGCAGAGTTAGCAATGGAGGCTGGCTTGCCTAATGGTGTCTTAAACATT
GTTCATGGCACTGTTGACATTATTAATGCCATTTGTGATGATGATGATATTAAAGCTATA
TCATTTGTTGGTTCAAACACAGATGGCATGTACATATATGCAAGGGCATCAGCTAAAGGG
AAACGTGTGCAGTCTAATATAGGAGCCAAGAATCATGCAATTGTCATGCCTGATGCCAGC
AAGGATGCTACCTTGAATGCACTAGTTTCTGCTGGTTTTGGTGCTGCAGGACAAAGATGC
ATGGTGCTCAGCACGGTAGTCTTTGTTGGAGGCTCAAAATCATGGGAAGATAAACTAGTG
GAGTGTGCCAAGGCTCTTAAAGTAAATGCTGGAATAGAACCTGATGCAGACCTTGGTCCA
GTGATTAGCAAACAGGTGAAGGAACGAATATGCAGATTGATCCAAGCTGGAGTGGACAGT
GGTGCCAGACTCGTGCTTGACGGAAGAAATATTGAGGCATGTCTTACCACTTATTTGTCT
ATGATTATTTTGCTTGATTTCTTTTGGTCCAATCAATCATTTTCTTATATTCCTTAA

Peptide Sequence

PEP ID

VIT_03s0132g00230.t01
PEP Infomation

pep chromosome:12X:3:11685127:11703165:-1 gene:VIT_03s0132g00230 transcript:VIT_03s0132g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLPPPPGSFIDREELIQHVGDFALSQGYVVTIKQSKKDKVVVLGCDRGGVYRNRRKLVDE
SSAEQVRKRKTGSRLTNCPFEVVGKKEDGLWVLAIKNGEHNHDPIRDISEHPSSRRFTER
EVLLIKDMTEAGLKPRQILKRLRQNNPELLSTPKHVYNVKAKLRQGNLTVRNFKSLRVKS
SVENSHISTANEPSWRQRNPPRVPNLIGGRFVDSQSFASIDVTNPATQKVVSQVPLTTNE
EFRAAIFAAKRAFPSWRDTPVTTRQRIMFKFQELIRRDIDKIAMNITTEHGKTLKDAYTD
VHRGLEVVEHACGMATLQMGEFVSNVSNGIDTYSIREPLGVCAGICPFDFPAMIPLWMFP
IAVTCGNTFILKPSEKDPGATIILAELAMEAGLPNGVLNIVHGTVDIINAICDDDDIKAI
SFVGSNTDGMYIYARASAKGKRVQSNIGAKNHAIVMPDASKDATLNALVSAGFGAAGQRC
MVLSTVVFVGGSKSWEDKLVECAKALKVNAGIEPDADLGPVISKQVKERICRLIQAGVDS
GARLVLDGRNIEACLTTYLSMIILLDFFWSNQSFSYIP

Transcript Sequence

Transcript ID

VIT_03s0132g00230.t01
Transcript Infomation

cdna chromosome:12X:3:11685127:11703165:-1 gene:VIT_03s0132g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAATCCCGCAGATGCTTCCGCCTCCACCTGGAAGCTTTATAGATCGTGAAGAACTTATC
CAACATGTTGGGGACTTTGCCTTATCCCAGGGCTATGTAGTTACCATTAAGCAGTCCAAG
AAGGACAAAGTGGTAGTGCTTGGTTGTGACAGAGGGGGTGTTTACCGTAACAGGCGTAAA
CTTGTTGATGAAAGTTCTGCTGAACAGGTGCGCAAAAGAAAAACAGGTTCACGTCTTACA
AATTGCCCTTTTGAAGTCGTGGGTAAAAAGGAAGATGGCTTGTGGGTACTTGCCATTAAA
AATGGAGAACATAACCATGATCCCATCAGGGACATTTCAGAACACCCTTCATCTCGTCGC
TTCACTGAGAGAGAAGTATTGCTTATTAAAGATATGACTGAAGCTGGTTTAAAACCGCGC
CAAATTTTAAAGAGACTGAGACAAAACAATCCGGAGCTTTTATCAACACCAAAGCATGTT
TACAATGTTAAAGCTAAGCTCCGACAAGGAAATTTAACAGTGAGGAACTTCAAGTCATTG
AGAGTTAAATCATCTGTGGAAAATTCTCATATTTCAACAGCTAATGAGCCATCTTGGAGG
CAACGCAATCCTCCAAGGGTTCCCAATCTCATTGGAGGTAGATTTGTTGATTCACAGTCA
TTTGCATCCATTGATGTTACAAATCCTGCAACACAGAAAGTTGTTTCTCAAGTCCCTTTA
ACCACCAATGAAGAATTCAGAGCTGCAATATTTGCTGCAAAACGAGCTTTTCCTTCATGG
CGAGACACACCAGTTACCACCCGTCAACGTATCATGTTCAAATTCCAAGAACTCATTCGG
AGAGATATTGATAAGATTGCTATGAATATTACTACTGAACATGGAAAGACATTGAAGGAT
GCTTACACTGATGTACACCGTGGACTTGAGGTGGTGGAACATGCTTGTGGAATGGCGACT
CTACAAATGGGGGAATTTGTTTCAAATGTATCAAATGGAATTGATACCTATAGCATTAGA
GAGCCACTTGGTGTCTGTGCAGGGATTTGTCCATTCGATTTTCCAGCAATGATTCCCTTA
TGGATGTTTCCAATTGCAGTTACTTGTGGCAATACGTTCATTCTAAAGCCATCAGAGAAG
GATCCAGGGGCTACTATTATACTTGCAGAGTTAGCAATGGAGGCTGGCTTGCCTAATGGT
GTCTTAAACATTGTTCATGGCACTGTTGACATTATTAATGCCATTTGTGATGATGATGAT
ATTAAAGCTATATCATTTGTTGGTTCAAACACAGATGGCATGTACATATATGCAAGGGCA
TCAGCTAAAGGGAAACGTGTGCAGTCTAATATAGGAGCCAAGAATCATGCAATTGTCATG
CCTGATGCCAGCAAGGATGCTACCTTGAATGCACTAGTTTCTGCTGGTTTTGGTGCTGCA
GGACAAAGATGCATGGTGCTCAGCACGGTAGTCTTTGTTGGAGGCTCAAAATCATGGGAA
GATAAACTAGTGGAGTGTGCCAAGGCTCTTAAAGTAAATGCTGGAATAGAACCTGATGCA
GACCTTGGTCCAGTGATTAGCAAACAGGTGAAGGAACGAATATGCAGATTGATCCAAGCT
GGAGTGGACAGTGGTGCCAGACTCGTGCTTGACGGAAGAAATATTGAGGCATGTCTTACC
ACTTATTTGTCTATGATTATTTTGCTTGATTTCTTTTGGTCCAATCAATCATTTTCTTAT
ATTCCTTAA