Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0097g00570.t01
CDS Infomation

cds chromosome:12X:3:10961496:10963639:-1 gene:VIT_03s0097g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATCCGCCGTCTTAGCGAGTCGCAATGAATCGAATTGGGCGCAGTCGAGAGGCGGC
GGCGGCGGCGGAGGCGGAGGAGGATTCATGGGAAAATTCCATTCTTCAAACCCTAACCCT
AACAATTCGAAGCGGAAAACCCACGCGCCGGCAGGTGATATCAACGATTTATCGCCTGCT
GTGACGCAATCGGCATCGGATGACGCTTCTTCCTTCAATCAGAGATCGATTGTTGAGTTC
AATCGGGGTAGATACGTGACCTTCAACATCGGCTCGTATTCGAGAAAAGATTTGGTGCAA
CTCAAGAATCGGTTGGTATCGGAACTCGAGAAGATCCAGAATCTGAGTAATCGGATCGAG
TCCGGCGATTTGCAGCTCAGATCTGGCGGCGATCGGACAGCAAACAAGCAGCAGCGGCCG
AATAACAAGAAGATAGCGGGAAACAAACGGCCTCCGCCTTTTGATTCCGGAAGAGGTCCA
AAGCGATCGGCAGCGGAGAACGCGAGCTTGATGAAGCTGTGCGGACAAACGTTGACGAAG
CTGATGAAGCACAAGCACAGTTGGGTGTTCAATTCGCCTGTTGATGTTGTTGGCATGGGG
CTTCACGATTACCACCAGATTATTAAAAGGCCGATGGATCTTGGCACCGTAAAATCGAAG
ATCGCGAAGAATCTCTATGATTCGCCCCTTGATTTCGCCGCGGATGTCAGATTGACATTC
GACAATGCTCTGTTGTATAACCCTAAGGGCCACGATGTTCACGTCATGGCCGAGCAGTTG
CTGGCTAGGTTTGAGGATTTGTTCAAACCAGTGTACAATAAGCTAGAAGAAGATGAGAGG
GATCAGGAAAGAATCATCGTTGGTGAATTGCAGGGGAGTTCTTGGAACCATATTCCGACC
CCAGAGAGGTTGAAGAAGCCAAGTCCGAAGCCTGTTGCGAAAAAACCTGAGAGAATGCAG
GTACCTATACCCGCCACTGGGTCCTCAAACCCACCTTCGGTTCAGTCGGTGCCAACGCCA
TCGCCTATGCGAGCCCCACCAGTGAAGCCATTGGCCACAAGGCCAAGCAGTGGGAAGCAA
CCGAAGCCCAAGGCCAAGGATCCTAACAAAAGAGAGATGAGCTTAGAGGAGAAGCATAAA
TTGGGTCTTGGGTTGCAGAGTTTGCCTCAGGAGAAGATGGACCAGGTTGTGCAGATTATA
AGCAAGAAAAATGGCCATTTAACGCAAGATGGCGATGAAATTGAGCTTGATATCGAGGCT
GTTGATACCGAGACTCTTTGGGAGCTTGATAGATTAGTGACTAATTGGAAGAAAATGGTG
AGCAAGATCAAGCGGCAAGCCCTTATGGTCAACAACAACACGGCTGCCACAGAAGTAAAT
AGGTCTTCTATGAATGAGAGAACTGAACCTTCTCTGGCTCCGGCCATGGCAAAGAAGCCA
AAGAAAGGAGAGGCTGGGGAGGAAGATGTCGACATTGGTGATGAAATACCAACAGCCACC
TTCCCACCAGTTGAAATTGAGAAGGATGATGCCCGGGCCAGCAGTAGTTCTAGCAGTTCG
AGTAGTTCAAGCAGTGATTCCTCCTCATCGAGTGATTCGGATTCGGGGAGTTCCTCTGGG
AGTGATTCGGATGTGGACAATGCTCAATCTAGACCTTGA

Peptide Sequence

PEP ID

VIT_03s0097g00570.t01
PEP Infomation

pep chromosome:12X:3:10961496:10963639:-1 gene:VIT_03s0097g00570 transcript:VIT_03s0097g00570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASAVLASRNESNWAQSRGGGGGGGGGGFMGKFHSSNPNPNNSKRKTHAPAGDINDLSPA
VTQSASDDASSFNQRSIVEFNRGRYVTFNIGSYSRKDLVQLKNRLVSELEKIQNLSNRIE
SGDLQLRSGGDRTANKQQRPNNKKIAGNKRPPPFDSGRGPKRSAAENASLMKLCGQTLTK
LMKHKHSWVFNSPVDVVGMGLHDYHQIIKRPMDLGTVKSKIAKNLYDSPLDFAADVRLTF
DNALLYNPKGHDVHVMAEQLLARFEDLFKPVYNKLEEDERDQERIIVGELQGSSWNHIPT
PERLKKPSPKPVAKKPERMQVPIPATGSSNPPSVQSVPTPSPMRAPPVKPLATRPSSGKQ
PKPKAKDPNKREMSLEEKHKLGLGLQSLPQEKMDQVVQIISKKNGHLTQDGDEIELDIEA
VDTETLWELDRLVTNWKKMVSKIKRQALMVNNNTAATEVNRSSMNERTEPSLAPAMAKKP
KKGEAGEEDVDIGDEIPTATFPPVEIEKDDARASSSSSSSSSSSSDSSSSSDSDSGSSSG
SDSDVDNAQSRP

Transcript Sequence

Transcript ID

VIT_03s0097g00570.t01
Transcript Infomation

cdna chromosome:12X:3:10961496:10963639:-1 gene:VIT_03s0097g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCCCAAACCCTCGTCGCACGTTTTCCCCTATCCTCCTTTGGATCTTCTATTCTCCGGCG
GTTCAACGGCGAGTCTTCAGCCTCCGACGAGTTTTCTGAACGGCTCCGGTGGGCGCGTGT
TTGGCACCTTCCTTTTGATACATGATTTCTCCGGCACTGGAACCTGACAATTTTAGCCGG
AGCTTGGCCGGAATCCTGGTGTTGAAGCTATGGCATCCGCCGTCTTAGCGAGTCGCAATG
AATCGAATTGGGCGCAGTCGAGAGGCGGCGGCGGCGGCGGAGGCGGAGGAGGATTCATGG
GAAAATTCCATTCTTCAAACCCTAACCCTAACAATTCGAAGCGGAAAACCCACGCGCCGG
CAGGTGATATCAACGATTTATCGCCTGCTGTGACGCAATCGGCATCGGATGACGCTTCTT
CCTTCAATCAGAGATCGATTGTTGAGTTCAATCGGGGTAGATACGTGACCTTCAACATCG
GCTCGTATTCGAGAAAAGATTTGGTGCAACTCAAGAATCGGTTGGTATCGGAACTCGAGA
AGATCCAGAATCTGAGTAATCGGATCGAGTCCGGCGATTTGCAGCTCAGATCTGGCGGCG
ATCGGACAGCAAACAAGCAGCAGCGGCCGAATAACAAGAAGATAGCGGGAAACAAACGGC
CTCCGCCTTTTGATTCCGGAAGAGGTCCAAAGCGATCGGCAGCGGAGAACGCGAGCTTGA
TGAAGCTGTGCGGACAAACGTTGACGAAGCTGATGAAGCACAAGCACAGTTGGGTGTTCA
ATTCGCCTGTTGATGTTGTTGGCATGGGGCTTCACGATTACCACCAGATTATTAAAAGGC
CGATGGATCTTGGCACCGTAAAATCGAAGATCGCGAAGAATCTCTATGATTCGCCCCTTG
ATTTCGCCGCGGATGTCAGATTGACATTCGACAATGCTCTGTTGTATAACCCTAAGGGCC
ACGATGTTCACGTCATGGCCGAGCAGTTGCTGGCTAGGTTTGAGGATTTGTTCAAACCAG
TGTACAATAAGCTAGAAGAAGATGAGAGGGATCAGGAAAGAATCATCGTTGGTGAATTGC
AGGGGAGTTCTTGGAACCATATTCCGACCCCAGAGAGGTTGAAGAAGCCAAGTCCGAAGC
CTGTTGCGAAAAAACCTGAGAGAATGCAGGTACCTATACCCGCCACTGGGTCCTCAAACC
CACCTTCGGTTCAGTCGGTGCCAACGCCATCGCCTATGCGAGCCCCACCAGTGAAGCCAT
TGGCCACAAGGCCAAGCAGTGGGAAGCAACCGAAGCCCAAGGCCAAGGATCCTAACAAAA
GAGAGATGAGCTTAGAGGAGAAGCATAAATTGGGTCTTGGGTTGCAGAGTTTGCCTCAGG
AGAAGATGGACCAGGTTGTGCAGATTATAAGCAAGAAAAATGGCCATTTAACGCAAGATG
GCGATGAAATTGAGCTTGATATCGAGGCTGTTGATACCGAGACTCTTTGGGAGCTTGATA
GATTAGTGACTAATTGGAAGAAAATGGTGAGCAAGATCAAGCGGCAAGCCCTTATGGTCA
ACAACAACACGGCTGCCACAGAAGTAAATAGGTCTTCTATGAATGAGAGAACTGAACCTT
CTCTGGCTCCGGCCATGGCAAAGAAGCCAAAGAAAGGAGAGGCTGGGGAGGAAGATGTCG
ACATTGGTGATGAAATACCAACAGCCACCTTCCCACCAGTTGAAATTGAGAAGGATGATG
CCCGGGCCAGCAGTAGTTCTAGCAGTTCGAGTAGTTCAAGCAGTGATTCCTCCTCATCGA
GTGATTCGGATTCGGGGAGTTCCTCTGGGAGTGATTCGGATGTGGACAATGCTCAATCTA
GACCTTGA