Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0097g00470.t01
CDS Infomation

cds chromosome:12X:3:10713045:10717110:-1 gene:VIT_03s0097g00470 gene_biotype:protein_coding transcript_biotype:protein_coding description:HVA22-like protein [Source:UniProtKB/TrEMBL;Acc:F6HW54]
Sequence

ATGGGTGTTATGAATGTTCTCAAATTCTCAGCTGCATGCTTTGATCTTCTTGGCTGGCCT
CTCTTTGCACTGGGTTATCCTCTATGTTCTTCAATTTGGGTAATTGAGACTAACTCAATC
TCAGACTTTCGGAAGTTGGTGACGTATTGGGTTCTATTTTCCTTGATTTCACTCTTTGAT
CATGCTTTTGCCAAGCTCCTTGAATGGATACCATTCTGGCCTTACATAAAGCTGATGATC
ATCTGCTGCCTGGTGATGCCTCATTTTGATGGTTCATATTATGTCTATCAACACCTTGTT
CATCCATGCTTGTCCATGGTCACACAAGTTGTCATGAATTGGCTCTTCAATGAATCAAAA
AAGTTGTCTCCTAGCAGAGAAAACTTTCTTGTTGCAGCAGATCAATATATTAAAGAGAAT
GGAGCTGAAGCTTTGGAGAAACTCCTTGCTAGTAAGTTGAAGAGCACAAAGTCTAATGTT
GAAGTGACAGAGATTAAAGAACCTGTAGCACCGGAGAAAAAAGTGGAACAGTGGCAGTGT
GAAGAGCTCAATGTTGCTCAAAAGGAGATCCGAGTAGTTGAAGTAACAGAGATAAAAAAT
AGGGATGGAGCAAAGCAGTGTGAAGGTCCTAATGTTGCTAAGGAGGAGATCAAAGTGACA
AAAGTAGCACAGAGAACATTTGGTGGTACGGCAAAGTGGGTTAAACGAACAGAGTTAAAT
CTTGGTGAAACTAAAAGTACTACAACCTGTGCTGAGGAGATAGCAGAAAGGCCAGCTGGA
CTGTTGAATTCCCATCTTCAAGGGGAGAGACATAAGGCCACTTCTGAGCAGCTGAATGCC
AAAAACCAGGCAACCAAAACCAATGGTTCCCCATCTGCTTCAGTGGAAAACAAATCTGAT
CAGACCAAAAACAATGGAATCTCAGCTTCTTCGACAGTGAAGAGACCCGGTGAACAACAC
AAGTGTGCATCTAGCAATGGACTGGAGCAGAAGAATAACAAAATCAGGAGGAGAAGGCGC
TAG

Peptide Sequence

PEP ID

VIT_03s0097g00470.t01
PEP Infomation

pep chromosome:12X:3:10713045:10717110:-1 gene:VIT_03s0097g00470 transcript:VIT_03s0097g00470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HVA22-like protein [Source:UniProtKB/TrEMBL;Acc:F6HW54]
Sequence

MGVMNVLKFSAACFDLLGWPLFALGYPLCSSIWVIETNSISDFRKLVTYWVLFSLISLFD
HAFAKLLEWIPFWPYIKLMIICCLVMPHFDGSYYVYQHLVHPCLSMVTQVVMNWLFNESK
KLSPSRENFLVAADQYIKENGAEALEKLLASKLKSTKSNVEVTEIKEPVAPEKKVEQWQC
EELNVAQKEIRVVEVTEIKNRDGAKQCEGPNVAKEEIKVTKVAQRTFGGTAKWVKRTELN
LGETKSTTTCAEEIAERPAGLLNSHLQGERHKATSEQLNAKNQATKTNGSPSASVENKSD
QTKNNGISASSTVKRPGEQHKCASSNGLEQKNNKIRRRRR

Transcript Sequence

Transcript ID

VIT_03s0097g00470.t01
Transcript Infomation

cdna chromosome:12X:3:10713045:10717110:-1 gene:VIT_03s0097g00470 gene_biotype:protein_coding transcript_biotype:protein_coding description:HVA22-like protein [Source:UniProtKB/TrEMBL;Acc:F6HW54]
Sequence

CCAGCTCATTCCTCAATTCCAAGATGGGTGTTATGAATGTTCTCAAATTCTCAGCTGCAT
GCTTTGATCTTCTTGGCTGGCCTCTCTTTGCACTGGGTTATCCTCTATGTTCTTCAATTT
GGGTAATTGAGACTAACTCAATCTCAGACTTTCGGAAGTTGGTGACGTATTGGGTTCTAT
TTTCCTTGATTTCACTCTTTGATCATGCTTTTGCCAAGCTCCTTGAATGGATACCATTCT
GGCCTTACATAAAGCTGATGATCATCTGCTGCCTGGTGATGCCTCATTTTGATGGTTCAT
ATTATGTCTATCAACACCTTGTTCATCCATGCTTGTCCATGGTCACACAAGTTGTCATGA
ATTGGCTCTTCAATGAATCAAAAAAGTTGTCTCCTAGCAGAGAAAACTTTCTTGTTGCAG
CAGATCAATATATTAAAGAGAATGGAGCTGAAGCTTTGGAGAAACTCCTTGCTAGTAAGT
TGAAGAGCACAAAGTCTAATGTTGAAGTGACAGAGATTAAAGAACCTGTAGCACCGGAGA
AAAAAGTGGAACAGTGGCAGTGTGAAGAGCTCAATGTTGCTCAAAAGGAGATCCGAGTAG
TTGAAGTAACAGAGATAAAAAATAGGGATGGAGCAAAGCAGTGTGAAGGTCCTAATGTTG
CTAAGGAGGAGATCAAAGTGACAAAAGTAGCACAGAGAACATTTGGTGGTACGGCAAAGT
GGGTTAAACGAACAGAGTTAAATCTTGGTGAAACTAAAAGTACTACAACCTGTGCTGAGG
AGATAGCAGAAAGGCCAGCTGGACTGTTGAATTCCCATCTTCAAGGGGAGAGACATAAGG
CCACTTCTGAGCAGCTGAATGCCAAAAACCAGGCAACCAAAACCAATGGTTCCCCATCTG
CTTCAGTGGAAAACAAATCTGATCAGACCAAAAACAATGGAATCTCAGCTTCTTCGACAG
TGAAGAGACCCGGTGAACAACACAAGTGTGCATCTAGCAATGGACTGGAGCAGAAGAATA
ACAAAATCAGGAGGAGAAGGCGCTAGTCCCTGAGACTTGCAAGGCCATCAGAAGAACTTA
AAGCAAAGTGGTGGTAGAATGAAAGACTGGGGATCATGGTACAATATCTGTAATGTGAGC
TGCACTAGTGAGCTTGACATGGACTCTCATCTTAATGGAAGGAGGCACTTTAATAGGATA
AACTATAACGCAGCTGTCTGACTTGGATGTTTCTT