Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0091g00320.t01
CDS Infomation

cds chromosome:12X:3:6642216:6651075:-1 gene:VIT_03s0091g00320 gene_biotype:protein_coding transcript_biotype:protein_coding description:KRR1 small subunit processome component [Source:UniProtKB/TrEMBL;Acc:F6H683]
Sequence

ATGGAGGAGAGCAACGGCGAAGTTGAAGTAGAGCGGAAGGAGAAGACGAAGCACAAGGGA
AAGCACGACAAGCCAAAGCCATGGGATGACCCTTCCATCGATCACTGGAAAGTCGACAAG
TTCGACCCTTCTTGGAACGAGGGCGGCATGCTCGAAGTCAGCTCCTTCTCCACCCTCTTC
CCTCAATACAGAGAAAAATACTTACAAGAAGCTTGGCCCACTGTGAGGGGTGCATTGAAG
GAATTTGGTGTTAAATCTGAGCTAAACCTGGTTGAGGGATGTATGACAGTGTCAACAACT
AGAAAGACTAGGGACCCCTATATCATTATGAAGGCTAGGGATCTCATTAAACTTTTGTCA
AGAAGTGTTCCTGCACCTCAGGCAATCAAGATACTGAATGATGAAATGCAATGCGATATC
ATCAAGATTGGAAGCCTTGTTCGGAATAAGGAACGATTTGTTAAGCGTAGGCAACATCTT
GTGGGCCCCAACTCTTCCACTCTAAAGGCACTTGAAATTTTGACAGGATGCTATATTCTT
GTTCAGGGGAACACTGTTGCTGCTATGGGTTCATTTAAAGGTCTAAAACAAGTCCGAAGG
GTGGTGGAAGACTGTATACAGAATAAAATGCATCCAGTATATCATATCAAGACCTTGATG
ATGAAGAGAGAACTTGCTAGTGATCCAGCACTTGAAAATGAGAACTGGGATAGGTTTCTT
CCAAAGTTTAAGAAGAAAAATGTTAAACAAAAGAAAGTTAAGAGCAAGGAGAAGAAGCCA
TATACACCCTTCCCTCCTCCTCAGCCACCTAGCAAGGTTGACCTACAACTGGAAAGTGGT
GAGTACTTCTTAAGTGATCAAAAGAAGTTTGCGAAGAAGTGGCAACAGAAGCTGGAGAAG
CAGGCAGAAAAAACAGCAGAGAACAAAAGAAAAAGAGAAGCTGCATTTGTTCCTCCCATG
GAACCCATGGTGCAGGATCCAAGCAAATCTGCTGATGACAAGAATGATGTGGCTGCAATG
GCCATGTCGTTAAAGAAAAAGGCAAAGGAGTTTGGGAAGCAAAAATCCCTTGAGAATGTC
AATCCTGAAACATACATTGCGGCTTCAGGAGAAGCACCCTCGAAGAAGAAACGCAAGCAC
TCTAAGTCTTTGATACAATGA

Peptide Sequence

PEP ID

VIT_03s0091g00320.t01
PEP Infomation

pep chromosome:12X:3:6642216:6651075:-1 gene:VIT_03s0091g00320 transcript:VIT_03s0091g00320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:KRR1 small subunit processome component [Source:UniProtKB/TrEMBL;Acc:F6H683]
Sequence

MEESNGEVEVERKEKTKHKGKHDKPKPWDDPSIDHWKVDKFDPSWNEGGMLEVSSFSTLF
PQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTTRKTRDPYIIMKARDLIKLLS
RSVPAPQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYIL
VQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIKTLMMKRELASDPALENENWDRFL
PKFKKKNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQLESGEYFLSDQKKFAKKWQQKLEK
QAEKTAENKRKREAAFVPPMEPMVQDPSKSADDKNDVAAMAMSLKKKAKEFGKQKSLENV
NPETYIAASGEAPSKKKRKHSKSLIQ

Transcript Sequence

Transcript ID

VIT_03s0091g00320.t01
Transcript Infomation

cdna chromosome:12X:3:6642216:6651075:-1 gene:VIT_03s0091g00320 gene_biotype:protein_coding transcript_biotype:protein_coding description:KRR1 small subunit processome component [Source:UniProtKB/TrEMBL;Acc:F6H683]
Sequence

GAGAAATCAGGGAAGGAAGAAAGGGCGGCGATTGAAGAGAAGCAGAGGCCAGAGATGGAG
GAGAGCAACGGCGAAGTTGAAGTAGAGCGGAAGGAGAAGACGAAGCACAAGGGAAAGCAC
GACAAGCCAAAGCCATGGGATGACCCTTCCATCGATCACTGGAAAGTCGACAAGTTCGAC
CCTTCTTGGAACGAGGGCGGCATGCTCGAAGTCAGCTCCTTCTCCACCCTCTTCCCTCAA
TACAGAGAAAAATACTTACAAGAAGCTTGGCCCACTGTGAGGGGTGCATTGAAGGAATTT
GGTGTTAAATCTGAGCTAAACCTGGTTGAGGGATGTATGACAGTGTCAACAACTAGAAAG
ACTAGGGACCCCTATATCATTATGAAGGCTAGGGATCTCATTAAACTTTTGTCAAGAAGT
GTTCCTGCACCTCAGGCAATCAAGATACTGAATGATGAAATGCAATGCGATATCATCAAG
ATTGGAAGCCTTGTTCGGAATAAGGAACGATTTGTTAAGCGTAGGCAACATCTTGTGGGC
CCCAACTCTTCCACTCTAAAGGCACTTGAAATTTTGACAGGATGCTATATTCTTGTTCAG
GGGAACACTGTTGCTGCTATGGGTTCATTTAAAGGTCTAAAACAAGTCCGAAGGGTGGTG
GAAGACTGTATACAGAATAAAATGCATCCAGTATATCATATCAAGACCTTGATGATGAAG
AGAGAACTTGCTAGTGATCCAGCACTTGAAAATGAGAACTGGGATAGGTTTCTTCCAAAG
TTTAAGAAGAAAAATGTTAAACAAAAGAAAGTTAAGAGCAAGGAGAAGAAGCCATATACA
CCCTTCCCTCCTCCTCAGCCACCTAGCAAGGTTGACCTACAACTGGAAAGTGGTGAGTAC
TTCTTAAGTGATCAAAAGAAGTTTGCGAAGAAGTGGCAACAGAAGCTGGAGAAGCAGGCA
GAAAAAACAGCAGAGAACAAAAGAAAAAGAGAAGCTGCATTTGTTCCTCCCATGGAACCC
ATGGTGCAGGATCCAAGCAAATCTGCTGATGACAAGAATGATGTGGCTGCAATGGCCATG
TCGTTAAAGAAAAAGGCAAAGGAGTTTGGGAAGCAAAAATCCCTTGAGAATGTCAATCCT
GAAACATACATTGCGGCTTCAGGAGAAGCACCCTCGAAGAAGAAACGCAAGCACTCTAAG
TCTTTGATACAATGAGTGGCCTCAAGAGTGATAGTATGGGAAGTAGGCTGAGCTTTTTTC
CTTGGACCCCCACCCTAGGCTACTAAATTGTGGCTGGGCCTCAACTTTATGTTTCTGGAA
TCTGCTGGAAAACTGTCTTATACCCACAAATTAATGGGCTTTGGAAACTGTTGTTGTTAA
TTTATAGAAGTAGAAAGTTCAAAATTTTT