Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0091g00230.t01
CDS Infomation

cds chromosome:12X:3:6512832:6514492:1 gene:VIT_03s0091g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATATTTGGTCTTGGATATGCGAGCTGCCTAACTCGGACCAGTGGGTCGAGTCGGAG
TCACCTCCCACCTTCCAACTCGTCAGCTCCAAACCAACTAAAGCCGACACAACCCAGTCG
ATTCAACTCAGAGCTGAACGAACATCCGGGTCTAACTCGGAAGCCTTGGTTACTTTCTCC
GTCTACGTGCATGGCTTCCACCCTTCTAATGCAGAGAAGACCCTCTGGGTTTCTGACGCG
TGTCCTCTCGCATCTGACAAGCCATTCCTCCCACTGCTTCTTCAATTGGTCCAAGAGATC
GTGTCCCGTTCACCCACCGCGCATGATAGCACCTGCCCCCGCTCCCAGCTCCAGAAACTC
AGACCCGAACCTGTTGCGTGGGTCCTTGACTCGCACTCGCCCGAGTCGCTCTCCAGTTTC
TTCAACCTCGTCTTCCTCACGCGCCTCTTCTGGCTCTGTGTGTGCGATGCGCCCAGTGAA
GTCGGCTCTCTCTACTTCGACTCGCTCCTGACTCCCCATATCGAACTGTTCTCCTGCAAC
CACGCGCATGTGCTGCGAACGTTCTTGGTTTCCATCGGAGTGGACGCTGAGCTGTGTTTT
ATGCGCTCCGTTGGGTACATGTTAGCAAAATGGTTGATTTTAAGGGAGGTGGGCGTAGGA
TTGCAAATGTTAACCCCAGTGCCGAAGCTAGGATTTTCATACGCAATGGAAGCTCATGGG
TTGTGGACTCTGAAGGCCTACGCTCCGGTGATGGCGATGACTCGCACGCGCTTCAAGGGT
CAAGAAAAACAGTACTCCGCAATCGAGGCTAAGGAGTCCGTTCTGAGATATGCCCTAGCC
CACCAACAGCTCGAGGTCGTGATTCAGTTGGAATATTCCGTTGCCTTCCATGACGGCTAT
ATTCAAGTTAATACACGTGTCAATAATCTGCGGTTCCACATCGTAAAACTAGGATTTTCT
AAAAATGATGACATGGATTACATCGACGAGAGGCATTTCCCGTCGAGGATTAGGGTTTGG
ATTGGGCCAGAGATTGGGTCGACTTACGTAGCAAGTTTGAGCTTGGGCCGGTCTACAGAA
AACATAGAGAAAGAAGTGAAAACGCAGAGAACAGTAAAGGGTAATTTTGGAAAAATGAAA
ATATCAAGGGTAAAAGCAACAGCGAGGTTGTCGACGAGGACAAGGACGAAGAATTGGAGG
TGGGATCAGGACGCGGAAGGGAACGCTGCCATTTTTGAAGCAGTTCTATGCGAAAACAAT
AGCGGTATGGAAGTAGCGACGAACAAGCCACCTAACACTATTAGTGAGGGTGACAAATGG
GAGAATGGGTTGGGAAAGAGGTACTCTGGAGCGAATAGAATGTTTTCAAAGAGTGGGGGG
TTAGTTTTTGCAGGGGATGAGTATGGAGAAGGGGTAGAGTGGAGACTGAGCAAAGAAATG
GAAGGGAGTGTGTTGAAATGGAGAATAGGAGGTCAAATTTGGTTAAGTTATTGGCCTAAT
GAAATCAAGACTTCATACTTTGAAACAAGATGTGTGGAATGGTGCGACGAGGTGGATTTG
CCTTTAATTCCTTGTAAATAG

Peptide Sequence

PEP ID

VIT_03s0091g00230.t01
PEP Infomation

pep chromosome:12X:3:6512832:6514492:1 gene:VIT_03s0091g00230 transcript:VIT_03s0091g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDIWSWICELPNSDQWVESESPPTFQLVSSKPTKADTTQSIQLRAERTSGSNSEALVTFS
VYVHGFHPSNAEKTLWVSDACPLASDKPFLPLLLQLVQEIVSRSPTAHDSTCPRSQLQKL
RPEPVAWVLDSHSPESLSSFFNLVFLTRLFWLCVCDAPSEVGSLYFDSLLTPHIELFSCN
HAHVLRTFLVSIGVDAELCFMRSVGYMLAKWLILREVGVGLQMLTPVPKLGFSYAMEAHG
LWTLKAYAPVMAMTRTRFKGQEKQYSAIEAKESVLRYALAHQQLEVVIQLEYSVAFHDGY
IQVNTRVNNLRFHIVKLGFSKNDDMDYIDERHFPSRIRVWIGPEIGSTYVASLSLGRSTE
NIEKEVKTQRTVKGNFGKMKISRVKATARLSTRTRTKNWRWDQDAEGNAAIFEAVLCENN
SGMEVATNKPPNTISEGDKWENGLGKRYSGANRMFSKSGGLVFAGDEYGEGVEWRLSKEM
EGSVLKWRIGGQIWLSYWPNEIKTSYFETRCVEWCDEVDLPLIPCK

Transcript Sequence

Transcript ID

VIT_03s0091g00230.t01
Transcript Infomation

cdna chromosome:12X:3:6512832:6514492:1 gene:VIT_03s0091g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACCAATAGATATGGATATTTGGTCTTGGATATGCGAGCTGCCTAACTCGGACCAGTGGG
TCGAGTCGGAGTCACCTCCCACCTTCCAACTCGTCAGCTCCAAACCAACTAAAGCCGACA
CAACCCAGTCGATTCAACTCAGAGCTGAACGAACATCCGGGTCTAACTCGGAAGCCTTGG
TTACTTTCTCCGTCTACGTGCATGGCTTCCACCCTTCTAATGCAGAGAAGACCCTCTGGG
TTTCTGACGCGTGTCCTCTCGCATCTGACAAGCCATTCCTCCCACTGCTTCTTCAATTGG
TCCAAGAGATCGTGTCCCGTTCACCCACCGCGCATGATAGCACCTGCCCCCGCTCCCAGC
TCCAGAAACTCAGACCCGAACCTGTTGCGTGGGTCCTTGACTCGCACTCGCCCGAGTCGC
TCTCCAGTTTCTTCAACCTCGTCTTCCTCACGCGCCTCTTCTGGCTCTGTGTGTGCGATG
CGCCCAGTGAAGTCGGCTCTCTCTACTTCGACTCGCTCCTGACTCCCCATATCGAACTGT
TCTCCTGCAACCACGCGCATGTGCTGCGAACGTTCTTGGTTTCCATCGGAGTGGACGCTG
AGCTGTGTTTTATGCGCTCCGTTGGGTACATGTTAGCAAAATGGTTGATTTTAAGGGAGG
TGGGCGTAGGATTGCAAATGTTAACCCCAGTGCCGAAGCTAGGATTTTCATACGCAATGG
AAGCTCATGGGTTGTGGACTCTGAAGGCCTACGCTCCGGTGATGGCGATGACTCGCACGC
GCTTCAAGGGTCAAGAAAAACAGTACTCCGCAATCGAGGCTAAGGAGTCCGTTCTGAGAT
ATGCCCTAGCCCACCAACAGCTCGAGGTCGTGATTCAGTTGGAATATTCCGTTGCCTTCC
ATGACGGCTATATTCAAGTTAATACACGTGTCAATAATCTGCGGTTCCACATCGTAAAAC
TAGGATTTTCTAAAAATGATGACATGGATTACATCGACGAGAGGCATTTCCCGTCGAGGA
TTAGGGTTTGGATTGGGCCAGAGATTGGGTCGACTTACGTAGCAAGTTTGAGCTTGGGCC
GGTCTACAGAAAACATAGAGAAAGAAGTGAAAACGCAGAGAACAGTAAAGGGTAATTTTG
GAAAAATGAAAATATCAAGGGTAAAAGCAACAGCGAGGTTGTCGACGAGGACAAGGACGA
AGAATTGGAGGTGGGATCAGGACGCGGAAGGGAACGCTGCCATTTTTGAAGCAGTTCTAT
GCGAAAACAATAGCGGTATGGAAGTAGCGACGAACAAGCCACCTAACACTATTAGTGAGG
GTGACAAATGGGAGAATGGGTTGGGAAAGAGGTACTCTGGAGCGAATAGAATGTTTTCAA
AGAGTGGGGGGTTAGTTTTTGCAGGGGATGAGTATGGAGAAGGGGTAGAGTGGAGACTGA
GCAAAGAAATGGAAGGGAGTGTGTTGAAATGGAGAATAGGAGGTCAAATTTGGTTAAGTT
ATTGGCCTAATGAAATCAAGACTTCATACTTTGAAACAAGATGTGTGGAATGGTGCGACG
AGGTGGATTTGCCTTTAATTCCTTGTAAATAGATTTTCAAAGGGATTCATATGTACTCCT
ACTTATATTAATATAAGAGCTAATCAACTACTTTATCTTAA