Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0088g01150.t01
CDS Infomation

cds chromosome:12X:3:9394421:9397946:-1 gene:VIT_03s0088g01150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTTATCAGTGGGTATTGGGAGGAATTGTTGCTTCTTTGTTGGGGTTTCTTCTTCTG
GACCGTTCAAGAGGGAAGAGGGTGAAGAGCAGAGCAGGAGGACATTTAATGGAGAAAATG
AAGGATGAGTGTGTCAAGAGCTCTGCAAATGGAGAATGCTGCTCGGGTTTCGATGGCGGT
ACCGATGTGATTGTTGTTGGAGCTGGGGTTGCTGGGTCTGCTCTGGCTCACACTCTTGGC
AAGGATGGGCGAAGAGTTCATGTGATTGAAAGAGACTTGAGCCAGCCTGACAGAATTGTG
GGTGAACTGCTACAACCAGGAGGCTATCTAAAATTGATTGAGTTGGGTCTTGAGGATTGT
TTAAATGAGATTGATGCTCAGAGGGTCCTTGGATATGCTCTTTACAAGGATGGGAAAAAT
GCTAGGCTCTCTTATCCCTTGGAACAGTTTCACTCGGATGTGGCTGGGAGAAGCTTTCAC
AATGGACGATTTGTCCAGAGGATGCGTGAGAAGGCTGCATCGCTTCCCAATGTAAAAATG
GAACAAGGAACGGTGACATCTCTGATTGAAGAAAAAGGGTCTATCAAAGGAGTGCAATAC
AGGACCAAGGCTGGTGAAGAACTGAAAGCATATGCTCCCCTTACAATTGTATGCGATGGT
TGTTTTTCAAATTTACGACGCTCTCTTTGCAACCCTAAGGTGGATGTGCCCTCTTGTTTT
GTTGGTTTAGTCCTCGAGAACTGTCAGCTCCCACATGCAAATCATGGACACGTTATTCTG
GCAGACCCTTCACCCATCTTGTTTTATCCGATTAGTAGCAATGAGATTCGCTGTTTGGTT
GATGTACCTGGCCAGAAAGTACCTTCAATTGCTAATGGTGAAATGGCCTGCTATTTGAAA
ACAGTAGTGGCTCCTCAGATCCCCCCTGAGCTGCATAATGCCTTCATATCCGCAATTGAT
AAGGGGAATGTGAAAACAATGCCAAATCGAAGTATGCCAGCCTCTCCCTATCCCACTCCA
GGTGCGCTTTTGATGGGAGATGCATTCAACATGCGGCATCCTTTAACTGGAGGTGGAATG
ACTGTGGCGCTCTCTGATATTGTTGTTCTGCGAGATCTTCTTAAACCTCTGCAAAATCTA
AATGATGCAGCTGCTCTTTGCAAATATCTTGAAGCCTTTTACACTCTACGTAAGCCAGTG
GCATCCACAATAAACACATTGGCCGGAGCCCTATATAAGGTGTTTTGCGCATCACCAGAT
CAAGCAAGGAAGGAAATGCGTGAAGCATGTTTTGACTATTTGAGTCTTGGAGGTATCTTC
TCAAATGGACCAATTGCTCTACTCTCTGGCCTAAACCCTCGCCCATTGAGCTTGGTTCTC
CACTTTTTTGCTGTGGCTGTCTATGGAGTTGGCCGCTTATTGCTTCCATTTCCTTCGCCC
AAGCGCATGTGGATTGGGGCCAGATTGATTTCGGGTGCATCAGGCATCATTTTCCCCATT
ATAAAAGCTGAAGGAGTCAGACAAATGTTCTTTCCTGCAACTGTTCCAGCATATTACAGA
GGTCCACCTAATTGA

Peptide Sequence

PEP ID

VIT_03s0088g01150.t01
PEP Infomation

pep chromosome:12X:3:9394421:9397946:-1 gene:VIT_03s0088g01150 transcript:VIT_03s0088g01150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIYQWVLGGIVASLLGFLLLDRSRGKRVKSRAGGHLMEKMKDECVKSSANGECCSGFDGG
TDVIVVGAGVAGSALAHTLGKDGRRVHVIERDLSQPDRIVGELLQPGGYLKLIELGLEDC
LNEIDAQRVLGYALYKDGKNARLSYPLEQFHSDVAGRSFHNGRFVQRMREKAASLPNVKM
EQGTVTSLIEEKGSIKGVQYRTKAGEELKAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCF
VGLVLENCQLPHANHGHVILADPSPILFYPISSNEIRCLVDVPGQKVPSIANGEMACYLK
TVVAPQIPPELHNAFISAIDKGNVKTMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGM
TVALSDIVVLRDLLKPLQNLNDAAALCKYLEAFYTLRKPVASTINTLAGALYKVFCASPD
QARKEMREACFDYLSLGGIFSNGPIALLSGLNPRPLSLVLHFFAVAVYGVGRLLLPFPSP
KRMWIGARLISGASGIIFPIIKAEGVRQMFFPATVPAYYRGPPN

Transcript Sequence

Transcript ID

VIT_03s0088g01150.t01
Transcript Infomation

cdna chromosome:12X:3:9394421:9397946:-1 gene:VIT_03s0088g01150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACAACCAATACTCTGACAAGGCTTTCGTCCTTCTGAGAAAGAGGAGCAGCTCATCTTCT
TCCAACCCATTTTTCTTTGTTATTTGAAGATGATTTATCAGTGGGTATTGGGAGGAATTG
TTGCTTCTTTGTTGGGGTTTCTTCTTCTGGACCGTTCAAGAGGGAAGAGGGTGAAGAGCA
GAGCAGGAGGACATTTAATGGAGAAAATGAAGGATGAGTGTGTCAAGAGCTCTGCAAATG
GAGAATGCTGCTCGGGTTTCGATGGCGGTACCGATGTGATTGTTGTTGGAGCTGGGGTTG
CTGGGTCTGCTCTGGCTCACACTCTTGGCAAGGATGGGCGAAGAGTTCATGTGATTGAAA
GAGACTTGAGCCAGCCTGACAGAATTGTGGGTGAACTGCTACAACCAGGAGGCTATCTAA
AATTGATTGAGTTGGGTCTTGAGGATTGTTTAAATGAGATTGATGCTCAGAGGGTCCTTG
GATATGCTCTTTACAAGGATGGGAAAAATGCTAGGCTCTCTTATCCCTTGGAACAGTTTC
ACTCGGATGTGGCTGGGAGAAGCTTTCACAATGGACGATTTGTCCAGAGGATGCGTGAGA
AGGCTGCATCGCTTCCCAATGTAAAAATGGAACAAGGAACGGTGACATCTCTGATTGAAG
AAAAAGGGTCTATCAAAGGAGTGCAATACAGGACCAAGGCTGGTGAAGAACTGAAAGCAT
ATGCTCCCCTTACAATTGTATGCGATGGTTGTTTTTCAAATTTACGACGCTCTCTTTGCA
ACCCTAAGGTGGATGTGCCCTCTTGTTTTGTTGGTTTAGTCCTCGAGAACTGTCAGCTCC
CACATGCAAATCATGGACACGTTATTCTGGCAGACCCTTCACCCATCTTGTTTTATCCGA
TTAGTAGCAATGAGATTCGCTGTTTGGTTGATGTACCTGGCCAGAAAGTACCTTCAATTG
CTAATGGTGAAATGGCCTGCTATTTGAAAACAGTAGTGGCTCCTCAGATCCCCCCTGAGC
TGCATAATGCCTTCATATCCGCAATTGATAAGGGGAATGTGAAAACAATGCCAAATCGAA
GTATGCCAGCCTCTCCCTATCCCACTCCAGGTGCGCTTTTGATGGGAGATGCATTCAACA
TGCGGCATCCTTTAACTGGAGGTGGAATGACTGTGGCGCTCTCTGATATTGTTGTTCTGC
GAGATCTTCTTAAACCTCTGCAAAATCTAAATGATGCAGCTGCTCTTTGCAAATATCTTG
AAGCCTTTTACACTCTACGTAAGCCAGTGGCATCCACAATAAACACATTGGCCGGAGCCC
TATATAAGGTGTTTTGCGCATCACCAGATCAAGCAAGGAAGGAAATGCGTGAAGCATGTT
TTGACTATTTGAGTCTTGGAGGTATCTTCTCAAATGGACCAATTGCTCTACTCTCTGGCC
TAAACCCTCGCCCATTGAGCTTGGTTCTCCACTTTTTTGCTGTGGCTGTCTATGGAGTTG
GCCGCTTATTGCTTCCATTTCCTTCGCCCAAGCGCATGTGGATTGGGGCCAGATTGATTT
CGGGTGCATCAGGCATCATTTTCCCCATTATAAAAGCTGAAGGAGTCAGACAAATGTTCT
TTCCTGCAACTGTTCCAGCATATTACAGAGGTCCACCTAATTGAGATAATGAAAATAAGA
AATCCACAGTCAACAACTGAAATTGTAATAGCCAGGCTGTTGTGTTTGTCTTCCTTTTGT
TTTCCAAGAGAAGTTCTTGTTTGTATCAGTCATGTTCCTCATAAGAAATCAAGGTGGGGT
TCCATGCTAGAATCAACAGAATATGAAGTACCAATATAAATTATATTTGTTCTAGGAAAT
TGTTCATGAAACAGGATTCCCTCCGAAATAGAATAACGATTTTCTTCCTAGAAAATGAA