Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0088g01060.t01
CDS Infomation

cds chromosome:12X:3:9296849:9309519:1 gene:VIT_03s0088g01060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTACTCTCTCATGTCTTCGCCTTCCATCTCTTCATCTTCCTCCTCCTTTTTAGGCCAA
ACCCACTTCGATTCCAGAAACCCAAATGCTTGCCTTCCCACAAAAGATAGTTGGATATGT
AAATGTGTGGCAACACCTTCCACAGAGACGACTGCTCACACGACAAAGGTCTCTCGCAAT
GCAAATATGGCCAAACTTCAAGCTGGTTATTTGTTTCCAGAGATAGCCAGAAGAAGGTCA
GCACACATGCTAAAGTACCCTGATGCACAAGTGATAAGCCTTGGAATTGGTGACACTACT
GAGCCCATTCCAGAAGTTATAACTTCTGGTATGGCAAAGAAAGCACATGCATTGTCAACA
CTAGAGGGTTACAGTGGTTATGGAGCTGAACAAGGTGAAAAACAATTGAGAGCTGCAATT
GCTTCGACCTTTTATGGTGACCTCAGCATAGAGGAAAGTGATATATTTGTCTCTGATGGT
GCAAAATCTGACATATCTCGCCTTCAGGTCATGTTTGGGTCTAATGTTACAATGGCAGTG
CAAGACCCATCATACCCGGCTTATGTAGACTTAAGTGTTATCTTGGGCCAGACTGGGCAG
TTTCAGAAGGATGTTGAGAAGTATGGAAACATCGAATACATGAAGTGTAATCCAGAGAAT
GGTTTCTTTCCTGATTTATCTACTGTTTCGCGAACCGATATCATTTTTTTCTGTTCACCA
TACAATCCCACTGGTAATGCTGCAACAAGGGAGCAACTGACCCGACTTGTACAGTTTGCC
AAGGACAATGGATCAATTCTAGTGTATGATTCGGGATATGCCATGTATATCTCGGATGAC
AGCCCAAGGTCCATCTTTGAAATTCCTGGAGCCAAAGAGGTTGCAATTGAGGTATCATCA
TTTTCCAAATATGCTGGGTTCACTGGAGTCCGTCTTGGTTGGACTGTGGTTCCAAAGGAG
CTTCTATATTCAGATGGATTTCCTGTTGCCAAGGACTTTAACCGCATTGAATGTACAACC
TTCAACGCTGCATCCAACATTTCTCAAGCTAGTGGTCTGGCTTGTCTTTCACCAGAAGGC
CTAGAGGCTATGCATAAACTGGTAGGTTTCTACAAAGAAAATACTAATATAATCATGGAG
ACATTCACTTCTCTTGGTTTTAGCGTGTACGGAGGTAAGAATGCACCATATGTTTGGGTT
CATTTCCCTGGTCAAAGCTCATGGGACGTGTTCAGCGAGATACTTGAGAAGACCCATGTG
GTAACAACACCTGGCAGTGGTTTCGGACCAGCTGGTGATGGTTTCATTAGGGTTTGTGCT
TTTAGTCACAGAGGCAATGTTCTAGAGGCCTGCAAAAGATTCAAGCGGTTATACAAGTGA

Peptide Sequence

PEP ID

VIT_03s0088g01060.t01
PEP Infomation

pep chromosome:12X:3:9296849:9309519:1 gene:VIT_03s0088g01060 transcript:VIT_03s0088g01060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MYSLMSSPSISSSSSSFLGQTHFDSRNPNACLPTKDSWICKCVATPSTETTAHTTKVSRN
ANMAKLQAGYLFPEIARRRSAHMLKYPDAQVISLGIGDTTEPIPEVITSGMAKKAHALST
LEGYSGYGAEQGEKQLRAAIASTFYGDLSIEESDIFVSDGAKSDISRLQVMFGSNVTMAV
QDPSYPAYVDLSVILGQTGQFQKDVEKYGNIEYMKCNPENGFFPDLSTVSRTDIIFFCSP
YNPTGNAATREQLTRLVQFAKDNGSILVYDSGYAMYISDDSPRSIFEIPGAKEVAIEVSS
FSKYAGFTGVRLGWTVVPKELLYSDGFPVAKDFNRIECTTFNAASNISQASGLACLSPEG
LEAMHKLVGFYKENTNIIMETFTSLGFSVYGGKNAPYVWVHFPGQSSWDVFSEILEKTHV
VTTPGSGFGPAGDGFIRVCAFSHRGNVLEACKRFKRLYK

Transcript Sequence

Transcript ID

VIT_03s0088g01060.t01
Transcript Infomation

cdna chromosome:12X:3:9296849:9309519:1 gene:VIT_03s0088g01060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAGTGGCGTATCTGTATCTGCATCCAAAAACATGTACTCTCTCATGTCTTCGCCTTCC
ATCTCTTCATCTTCCTCCTCCTTTTTAGGCCAAACCCACTTCGATTCCAGAAACCCAAAT
GCTTGCCTTCCCACAAAAGATAGTTGGATATGTAAATGTGTGGCAACACCTTCCACAGAG
ACGACTGCTCACACGACAAAGGTCTCTCGCAATGCAAATATGGCCAAACTTCAAGCTGGT
TATTTGTTTCCAGAGATAGCCAGAAGAAGGTCAGCACACATGCTAAAGTACCCTGATGCA
CAAGTGATAAGCCTTGGAATTGGTGACACTACTGAGCCCATTCCAGAAGTTATAACTTCT
GGTATGGCAAAGAAAGCACATGCATTGTCAACACTAGAGGGTTACAGTGGTTATGGAGCT
GAACAAGGTGAAAAACAATTGAGAGCTGCAATTGCTTCGACCTTTTATGGTGACCTCAGC
ATAGAGGAAAGTGATATATTTGTCTCTGATGGTGCAAAATCTGACATATCTCGCCTTCAG
GTCATGTTTGGGTCTAATGTTACAATGGCAGTGCAAGACCCATCATACCCGGCTTATGTA
GACTTAAGTGTTATCTTGGGCCAGACTGGGCAGTTTCAGAAGGATGTTGAGAAGTATGGA
AACATCGAATACATGAAGTGTAATCCAGAGAATGGTTTCTTTCCTGATTTATCTACTGTT
TCGCGAACCGATATCATTTTTTTCTGTTCACCATACAATCCCACTGGTAATGCTGCAACA
AGGGAGCAACTGACCCGACTTGTACAGTTTGCCAAGGACAATGGATCAATTCTAGTGTAT
GATTCGGGATATGCCATGTATATCTCGGATGACAGCCCAAGGTCCATCTTTGAAATTCCT
GGAGCCAAAGAGGTTGCAATTGAGGTATCATCATTTTCCAAATATGCTGGGTTCACTGGA
GTCCGTCTTGGTTGGACTGTGGTTCCAAAGGAGCTTCTATATTCAGATGGATTTCCTGTT
GCCAAGGACTTTAACCGCATTGAATGTACAACCTTCAACGCTGCATCCAACATTTCTCAA
GCTAGTGGTCTGGCTTGTCTTTCACCAGAAGGCCTAGAGGCTATGCATAAACTGGTAGGT
TTCTACAAAGAAAATACTAATATAATCATGGAGACATTCACTTCTCTTGGTTTTAGCGTG
TACGGAGGTAAGAATGCACCATATGTTTGGGTTCATTTCCCTGGTCAAAGCTCATGGGAC
GTGTTCAGCGAGATACTTGAGAAGACCCATGTGGTAACAACACCTGGCAGTGGTTTCGGA
CCAGCTGGTGATGGTTTCATTAGGGTTTGTGCTTTTAGTCACAGAGGCAATGTTCTAGAG
GCCTGCAAAAGATTCAAGCGGTTATACAAGTGAAGTGTAGTATGAGAATGGTTTCAGTTT
CAGCAGCCCTCCATTATGCTCCATGTTCTCTGTGATAGCAGGACTGGAGCAGGATTCGTA
TCTTATGTATCTCCCTCGTTATTTCTTATCAGATTCTATTTTTAATTTGGTGTAGAACCT
AGTAACTTTTACAAAGATTGATTTTGAATT