Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0088g00320.t01
CDS Infomation

cds chromosome:12X:3:8343365:8347681:1 gene:VIT_03s0088g00320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTAATCCTTCAATTGAAGCTGCCATAAAGCTTGAGAAGAAGAGAGCCGACAGGAAG
CTCAAGGAGCTCGATAGAGAAAGTAGTGACAACCCAGTCGTGGGGCTGTTTAATAGAGTG
GTTCGTGATAGTCTGGCTAGAGAGAAAGAGAGGCTGGAGAAGGCAGAGGAGGCTTTCAAG
GCTCTTGATCTTAACAAGTTAAAGAACTGTTTTGGGTTTGATACATTTTATGCAACTGAT
GTTCGGAGGTTTGGAGATGGGGGAATTTTTATTGGGAATTTGAGGAGACCCATTGAAGAA
GTCATTCCTAAATTGGAGAAAAAACTCTCTGAAGCAGCAGGGAGGGAGGTTGTTTTATGG
TTCATGGAGGAAAAGGCAAATGACATTACAAAACAGGTTTGCATGGTGCAGCCGAAGGCA
GAAATGGATCTACAATTTGAGTCAACCAAGCTGAGCACTCCTTGGGGTTATATTAGTTCA
ATAGTCTTATGTGTTGCAACTTTTGGAACCATAGCTCTAATGAGTGGCTTCTTCCTTAAA
CCCAATGCAACATTTGATGACTACCTGGCCGATGTTGTGCCTCTGTTTTCTGGCTTTGTT
ACCATTTTGGGAGTTTCTGAGATAGCCACAAGGGTAACAGCAGCTCGTTATGGTGTTAAA
CTCAGCCCATCATTTCTTGTGCCATCTAACTGGACAGGGTGCCTGGGAGTTATGAACAAC
TATGAGTCATTGCTTCCAAACAAGAAAGCGCTTTTTGATATTCCTGTTGCTCGAACAGCT
AGTGCCTACATTACGTCGCTGGTGCTAGCAGTTGCTGCTTTTATTGCTGATGGAAGCTTT
AATGGGGGTGACAATGCATTGTACATAAGGCCCCAATTCTTTTATAACAACCCTTTGCTT
TCTTTCATCCAGTTTGTCATTGGACCTTACACGGATGATCTTGGGAATGTACTTCCATAT
GCAGTAGAAGGTGTGGGAGTTCCTGTTGATCCCCTTGCTTTTGCTGGACTCTTAGGAATG
GTGGTGACTTCTTTGAACTTGTTGCCGTGTGGAAGACTTGAAGGAGGCCGCATTGCGCAA
GCTCTGTTTGGGAGAAACATTGCTACTTTGCTATCTTTTGGCACATCACTCTTGCTGGGA
ATTGGTGGCCTGAGTGGAAGCGTCCTCTGTTTAGCATGGGGGTTGTTTGCAACCTTCTTC
CGGGGCGGAGAAGAAGTACCAGCAACAGATGAGATCACCCCATTGGGAGATGACAGGTAT
GCTTGGGGATTTGTCCTTGCCCTCATCTGTTTCCTCACTCTTTTCCCTAATGGTGGAGGG
ACATTCTCCAGCTCATTTTTCAGTGATCCATTCTTCAGGGGTGATCTGTAA

Peptide Sequence

PEP ID

VIT_03s0088g00320.t01
PEP Infomation

pep chromosome:12X:3:8343365:8347681:1 gene:VIT_03s0088g00320 transcript:VIT_03s0088g00320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGNPSIEAAIKLEKKRADRKLKELDRESSDNPVVGLFNRVVRDSLAREKERLEKAEEAFK
ALDLNKLKNCFGFDTFYATDVRRFGDGGIFIGNLRRPIEEVIPKLEKKLSEAAGREVVLW
FMEEKANDITKQVCMVQPKAEMDLQFESTKLSTPWGYISSIVLCVATFGTIALMSGFFLK
PNATFDDYLADVVPLFSGFVTILGVSEIATRVTAARYGVKLSPSFLVPSNWTGCLGVMNN
YESLLPNKKALFDIPVARTASAYITSLVLAVAAFIADGSFNGGDNALYIRPQFFYNNPLL
SFIQFVIGPYTDDLGNVLPYAVEGVGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQ
ALFGRNIATLLSFGTSLLLGIGGLSGSVLCLAWGLFATFFRGGEEVPATDEITPLGDDRY
AWGFVLALICFLTLFPNGGGTFSSSFFSDPFFRGDL

Transcript Sequence

Transcript ID

VIT_03s0088g00320.t01
Transcript Infomation

cdna chromosome:12X:3:8343365:8347681:1 gene:VIT_03s0088g00320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATTCATGGGTAATCCTTCAATTGAAGCTGCCATAAAGCTTGAGAAGAAGAGAGCCGAC
AGGAAGCTCAAGGAGCTCGATAGAGAAAGTAGTGACAACCCAGTCGTGGGGCTGTTTAAT
AGAGTGGTTCGTGATAGTCTGGCTAGAGAGAAAGAGAGGCTGGAGAAGGCAGAGGAGGCT
TTCAAGGCTCTTGATCTTAACAAGTTAAAGAACTGTTTTGGGTTTGATACATTTTATGCA
ACTGATGTTCGGAGGTTTGGAGATGGGGGAATTTTTATTGGGAATTTGAGGAGACCCATT
GAAGAAGTCATTCCTAAATTGGAGAAAAAACTCTCTGAAGCAGCAGGGAGGGAGGTTGTT
TTATGGTTCATGGAGGAAAAGGCAAATGACATTACAAAACAGGTTTGCATGGTGCAGCCG
AAGGCAGAAATGGATCTACAATTTGAGTCAACCAAGCTGAGCACTCCTTGGGGTTATATT
AGTTCAATAGTCTTATGTGTTGCAACTTTTGGAACCATAGCTCTAATGAGTGGCTTCTTC
CTTAAACCCAATGCAACATTTGATGACTACCTGGCCGATGTTGTGCCTCTGTTTTCTGGC
TTTGTTACCATTTTGGGAGTTTCTGAGATAGCCACAAGGGTAACAGCAGCTCGTTATGGT
GTTAAACTCAGCCCATCATTTCTTGTGCCATCTAACTGGACAGGGTGCCTGGGAGTTATG
AACAACTATGAGTCATTGCTTCCAAACAAGAAAGCGCTTTTTGATATTCCTGTTGCTCGA
ACAGCTAGTGCCTACATTACGTCGCTGGTGCTAGCAGTTGCTGCTTTTATTGCTGATGGA
AGCTTTAATGGGGGTGACAATGCATTGTACATAAGGCCCCAATTCTTTTATAACAACCCT
TTGCTTTCTTTCATCCAGTTTGTCATTGGACCTTACACGGATGATCTTGGGAATGTACTT
CCATATGCAGTAGAAGGTGTGGGAGTTCCTGTTGATCCCCTTGCTTTTGCTGGACTCTTA
GGAATGGTGGTGACTTCTTTGAACTTGTTGCCGTGTGGAAGACTTGAAGGAGGCCGCATT
GCGCAAGCTCTGTTTGGGAGAAACATTGCTACTTTGCTATCTTTTGGCACATCACTCTTG
CTGGGAATTGGTGGCCTGAGTGGAAGCGTCCTCTGTTTAGCATGGGGGTTGTTTGCAACC
TTCTTCCGGGGCGGAGAAGAAGTACCAGCAACAGATGAGATCACCCCATTGGGAGATGAC
AGGTATGCTTGGGGATTTGTCCTTGCCCTCATCTGTTTCCTCACTCTTTTCCCTAATGGT
GGAGGGACATTCTCCAGCTCATTTTTCAGTGATCCATTCTTCAGGGGTGATCTGTAAATA
GATTACTTAGTGATTATGTATATGTTCTTAACCCGCTTCTGTAAATTGGCAACTGTACTC
GAGTCATTTCCGGCTGATCCAAGGAATCAAAAAAGTGGGGGAAAAAGCAAAAAAAAA