Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0088g00260.t01
CDS Infomation

cds chromosome:12X:3:8252549:8257129:-1 gene:VIT_03s0088g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCAAAAAGGCCATCCAATTCTAGTATGTTTCATGGAGGGCTGTTTCTGCGGTTG
TTGCTTGTAGTGTTAGTCTCAGCAAATGCAGCCTCGGCCGGTTCCATCGTCGAGTATCTG
CCTGGCTATGGGAACCTTACTTTCAAGCTTGAAACCGGATACGTAAGCGTTGGAGACTCG
GAGTTGTTCTACTACTTCATTGAGTCACAAGGGAACCCTCAGACTGACCCTTTTTTCCTC
TGGCTCACTGGAGGCCCCGGTTGTTCTTCTTTCAATGGACTCATTTACGAAATCGGTCCA
ATGGAGTTTGATATCCACAACTACCCAGGAGGGTTACCAAGATTGCTGCCTTACAAATAT
GCATGGACAAAGACAGCCAGCATATTATTCCTTGATGCCCCAGTTGGCACTGGCTTCTCC
TACTCAACATCCGCGGATGGTTGGTCTAGTTCAGACACAGATTCAGCCCTTGAAACCTAT
GAGTTCCTGAGGAAGTGGTTGATTGAACACCCTAAATACCTCCCTCTTCAACTCTATGTG
GGTGGTGATTCATATTCAGGCATAATCGTTCCTCTAGTCGTCAAACATATAGTAGATGCT
ATAGATGAACACACTGTGCCACGATTTAACCTACAAGGGTATTTGGTTGGGAGCCCGACA
ACAGATGAAAACATCAATACAAATGCAAAAGTTGTATTTGCTCACCGGTTGGCCCTTATA
TCCGATGAGCTCTATGAGGCTGCAAAAGAAAACTGCAATGGGAACTATGCAGATGTAGAT
CCATCTAACACAAAGTGCTTAAGTAGTCTTGGTGAAATCCAACATTGTGTCAAAGACTTG
TTCCGTAATGATATTTTGGAGCCCAAGTGTGTCTTTGAATCCCCAGAACCAACCCGAAGA
TCTCTGGATGAGAAGCCTGGAGACTTCATTCTTAATACACCAAAACTTGAAGAGTTCTGG
TGCCGGAACTTCAATTATGCATTGTCCTACATCTGGGCTAATGATGAAAGTGTCCAAGAA
GCATTAAATGTCCGAGTGGGAACTGTAAAATATTGGTCGAGGTGCAACAAGAGCTTGTCG
TACACAAAAGATGTTCAGAGCGTAATCGATGTTCACCGTTATCTCAGTAAAAAGCAGCTG
GAAGTTCTTGTAGAAGTTGGCGATCGCGACTTGGTTGTTCCATACCCGGGGGCGGTAGAA
TGGATTAGACTCCTCAATTTGACAATTGTTAGTCCTTGGCGGCCATGGTTTGTTGATGGT
GAAATTGCAGGATACACGGAGAAGCATTCACAAAATGGGTACCGATTGACTTATGCGACC
GTGAAGGGTGCAGGCCACACGGCTCCAGAGTACTATAGAAGAGAATGTTACTACATGTTC
AAGAGGTGGGTGCATTACTACCCTCTCTAG

Peptide Sequence

PEP ID

VIT_03s0088g00260.t01
PEP Infomation

pep chromosome:12X:3:8252549:8257129:-1 gene:VIT_03s0088g00260 transcript:VIT_03s0088g00260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAKRPSNSSMFHGGLFLRLLLVVLVSANAASAGSIVEYLPGYGNLTFKLETGYVSVGDS
ELFYYFIESQGNPQTDPFFLWLTGGPGCSSFNGLIYEIGPMEFDIHNYPGGLPRLLPYKY
AWTKTASILFLDAPVGTGFSYSTSADGWSSSDTDSALETYEFLRKWLIEHPKYLPLQLYV
GGDSYSGIIVPLVVKHIVDAIDEHTVPRFNLQGYLVGSPTTDENINTNAKVVFAHRLALI
SDELYEAAKENCNGNYADVDPSNTKCLSSLGEIQHCVKDLFRNDILEPKCVFESPEPTRR
SLDEKPGDFILNTPKLEEFWCRNFNYALSYIWANDESVQEALNVRVGTVKYWSRCNKSLS
YTKDVQSVIDVHRYLSKKQLEVLVEVGDRDLVVPYPGAVEWIRLLNLTIVSPWRPWFVDG
EIAGYTEKHSQNGYRLTYATVKGAGHTAPEYYRRECYYMFKRWVHYYPL

Transcript Sequence

Transcript ID

VIT_03s0088g00260.t01
Transcript Infomation

cdna chromosome:12X:3:8252549:8257129:-1 gene:VIT_03s0088g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAGTACACCATTTGATCGTCTCTCTTACAACATTCTTTAGGCCTTGTGTAGTTGAAGTA
TGGCTGCAAAAAGGCCATCCAATTCTAGTATGTTTCATGGAGGGCTGTTTCTGCGGTTGT
TGCTTGTAGTGTTAGTCTCAGCAAATGCAGCCTCGGCCGGTTCCATCGTCGAGTATCTGC
CTGGCTATGGGAACCTTACTTTCAAGCTTGAAACCGGATACGTAAGCGTTGGAGACTCGG
AGTTGTTCTACTACTTCATTGAGTCACAAGGGAACCCTCAGACTGACCCTTTTTTCCTCT
GGCTCACTGGAGGCCCCGGTTGTTCTTCTTTCAATGGACTCATTTACGAAATCGGTCCAA
TGGAGTTTGATATCCACAACTACCCAGGAGGGTTACCAAGATTGCTGCCTTACAAATATG
CATGGACAAAGACAGCCAGCATATTATTCCTTGATGCCCCAGTTGGCACTGGCTTCTCCT
ACTCAACATCCGCGGATGGTTGGTCTAGTTCAGACACAGATTCAGCCCTTGAAACCTATG
AGTTCCTGAGGAAGTGGTTGATTGAACACCCTAAATACCTCCCTCTTCAACTCTATGTGG
GTGGTGATTCATATTCAGGCATAATCGTTCCTCTAGTCGTCAAACATATAGTAGATGCTA
TAGATGAACACACTGTGCCACGATTTAACCTACAAGGGTATTTGGTTGGGAGCCCGACAA
CAGATGAAAACATCAATACAAATGCAAAAGTTGTATTTGCTCACCGGTTGGCCCTTATAT
CCGATGAGCTCTATGAGGCTGCAAAAGAAAACTGCAATGGGAACTATGCAGATGTAGATC
CATCTAACACAAAGTGCTTAAGTAGTCTTGGTGAAATCCAACATTGTGTCAAAGACTTGT
TCCGTAATGATATTTTGGAGCCCAAGTGTGTCTTTGAATCCCCAGAACCAACCCGAAGAT
CTCTGGATGAGAAGCCTGGAGACTTCATTCTTAATACACCAAAACTTGAAGAGTTCTGGT
GCCGGAACTTCAATTATGCATTGTCCTACATCTGGGCTAATGATGAAAGTGTCCAAGAAG
CATTAAATGTCCGAGTGGGAACTGTAAAATATTGGTCGAGGTGCAACAAGAGCTTGTCGT
ACACAAAAGATGTTCAGAGCGTAATCGATGTTCACCGTTATCTCAGTAAAAAGCAGCTGG
AAGTTCTTGTAGAAGTTGGCGATCGCGACTTGGTTGTTCCATACCCGGGGGCGGTAGAAT
GGATTAGACTCCTCAATTTGACAATTGTTAGTCCTTGGCGGCCATGGTTTGTTGATGGTG
AAATTGCAGGATACACGGAGAAGCATTCACAAAATGGGTACCGATTGACTTATGCGACCG
TGAAGGGTGCAGGCCACACGGCTCCAGAGTACTATAGAAGAGAATGTTACTACATGTTCA
AGAGGTGGGTGCATTACTACCCTCTCTAGTTCAACCTCACCCACTACTTCAAATCTATTA
TGAAGGTCCTCAAGGGGAGGGAGTGCTTTTATTTTACCTTCTGTAATCCTTTTTGGGTTT
AGTTTCTTGCAATCTAGATGTATTGAGTATCTATTTAATAATAGACCATGGTTTCTATGA