Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0088g00200.t01
CDS Infomation

cds chromosome:12X:3:8228928:8232449:-1 gene:VIT_03s0088g00200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGAACAAACAGCCCAAAACCCTAGACACCCACCTCTCTGCCAGGAGTGCAAATTG
AATCCGTCAAAGTACACATGCCCGGGTTGCTCTGTGCGCTCCTGTAGTCTTCCTTGTGTC
AAAGCTCACAAGCAACAGACTGGGTGTACGGGCAAGAGGCAGCAGACCCAGTTCGTTCCC
CTCTCTCAATTTGATGATACTCTCCTCTTATCTGATTACAATTTGCTCGAGGAAGTGAAG
AGTGTTGCAGAATCTGCTCAAAGAAGGAGAGTTAAACTGTGCGGGTATTCTCAGCTTAAG
TTTCCATACCATCTTCGAGGCCTTAGGAATGCTGCAGGAAGTCGCAGGACGAAACTCCTA
TTTCTCCCCAGTGGAATGTCAAAGAGGGAAAAAAATAAATCTCAATACAACCAAAGATCT
AAATGCATTACTTGGACAATTGAATGGCGGTTTCATTCAACAGATGTTGTTTTGCTCGAT
CACGGGATAAATGAAAACTCAACCTTCTCATCTGTAATTGAGAAGCATCTAAAGCCTGGT
CCATGGAATCATAAGCTCAAGCCGTTCTGTGCAGAGCAGCTGGACTGTCTCAAGTTTTTC
ATTCGTAAATATCCAAAGGGCCCCAGGTCACCTTTCCATGAGTTGGATATAAGTGCTCCA
ATAAGACAGCAATTTGCCAATTTAGTTATTCTAGAGTACCCCCAGATTCATGTTTTCCTC
CCTTCACATAGCTATGATTTTGATGCCACTAAAGATGCCAATCCCTGCCATCGTCGAGCA
GAGCTTAAGGAGTCTCTTACCATTGATCATCCAAGTCCAAAAGGCATTTCATTCAGGGAA
GAGGAAATAGAAGAACATGGCGGTTCTTTAGATTCTCAGGTTCTAGATCTCATGCAGCAT
GTGAAATCGACACAAGCTAATAAGCCACAGTCCAGTCCCCAGAAGAAGGAACCAAGCGAA
AACATAGATTTTGATTTTGAGCAAGGCTTGCTTGATGTATATTCTGATATCATTGCTCAA
ATTAATCCTGATGATTTTCTTGATTGGGAAGGTGACTTTTCCAAGGAAGTGAAATCTGAA
GAAGGAATGGATTGTTCAGATTTTGGTGGAGTTTTCCCAGTGGAGGAATTAGAGGAAGGG
GAGATTCCTGGGTGCTGA

Peptide Sequence

PEP ID

VIT_03s0088g00200.t01
PEP Infomation

pep chromosome:12X:3:8228928:8232449:-1 gene:VIT_03s0088g00200 transcript:VIT_03s0088g00200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEQTAQNPRHPPLCQECKLNPSKYTCPGCSVRSCSLPCVKAHKQQTGCTGKRQQTQFVP
LSQFDDTLLLSDYNLLEEVKSVAESAQRRRVKLCGYSQLKFPYHLRGLRNAAGSRRTKLL
FLPSGMSKREKNKSQYNQRSKCITWTIEWRFHSTDVVLLDHGINENSTFSSVIEKHLKPG
PWNHKLKPFCAEQLDCLKFFIRKYPKGPRSPFHELDISAPIRQQFANLVILEYPQIHVFL
PSHSYDFDATKDANPCHRRAELKESLTIDHPSPKGISFREEEIEEHGGSLDSQVLDLMQH
VKSTQANKPQSSPQKKEPSENIDFDFEQGLLDVYSDIIAQINPDDFLDWEGDFSKEVKSE
EGMDCSDFGGVFPVEELEEGEIPGC

Transcript Sequence

Transcript ID

VIT_03s0088g00200.t01
Transcript Infomation

cdna chromosome:12X:3:8228928:8232449:-1 gene:VIT_03s0088g00200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCCAAATGCTCAGGGCAAAACACAGTTTTCCTCTTTCATATTGAGTTCTCAGAGGTGCGG
CCCACTTGGTGTCGGACCAGCTCGACGGGTCACTCAATAGTCTTTCGCGGAGTACCCCTG
TTTTAGTGAACCCTGGGAGTTGTCGGCGGCTCGACGAAACCCTAAACCTTTCACCCATGG
AAGAACAAACAGCCCAAAACCCTAGACACCCACCTCTCTGCCAGGAGTGCAAATTGAATC
CGTCAAAGTACACATGCCCGGGTTGCTCTGTGCGCTCCTGTAGTCTTCCTTGTGTCAAAG
CTCACAAGCAACAGACTGGGTGTACGGGCAAGAGGCAGCAGACCCAGTTCGTTCCCCTCT
CTCAATTTGATGATACTCTCCTCTTATCTGATTACAATTTGCTCGAGGAAGTGAAGAGTG
TTGCAGAATCTGCTCAAAGAAGGAGAGTTAAACTGTGCGGGTATTCTCAGCTTAAGTTTC
CATACCATCTTCGAGGCCTTAGGAATGCTGCAGGAAGTCGCAGGACGAAACTCCTATTTC
TCCCCAGTGGAATGTCAAAGAGGGAAAAAAATAAATCTCAATACAACCAAAGATCTAAAT
GCATTACTTGGACAATTGAATGGCGGTTTCATTCAACAGATGTTGTTTTGCTCGATCACG
GGATAAATGAAAACTCAACCTTCTCATCTGTAATTGAGAAGCATCTAAAGCCTGGTCCAT
GGAATCATAAGCTCAAGCCGTTCTGTGCAGAGCAGCTGGACTGTCTCAAGTTTTTCATTC
GTAAATATCCAAAGGGCCCCAGGTCACCTTTCCATGAGTTGGATATAAGTGCTCCAATAA
GACAGCAATTTGCCAATTTAGTTATTCTAGAGTACCCCCAGATTCATGTTTTCCTCCCTT
CACATAGCTATGATTTTGATGCCACTAAAGATGCCAATCCCTGCCATCGTCGAGCAGAGC
TTAAGGAGTCTCTTACCATTGATCATCCAAGTCCAAAAGGCATTTCATTCAGGGAAGAGG
AAATAGAAGAACATGGCGGTTCTTTAGATTCTCAGGTTCTAGATCTCATGCAGCATGTGA
AATCGACACAAGCTAATAAGCCACAGTCCAGTCCCCAGAAGAAGGAACCAAGCGAAAACA
TAGATTTTGATTTTGAGCAAGGCTTGCTTGATGTATATTCTGATATCATTGCTCAAATTA
ATCCTGATGATTTTCTTGATTGGGAAGGTGACTTTTCCAAGGAAGTGAAATCTGAAGAAG
GAATGGATTGTTCAGATTTTGGTGGAGTTTTCCCAGTGGAGGAATTAGAGGAAGGGGAGA
TTCCTGGGTGCTGAACAATTGAATGCTCATTGCTCTGTTCAAGACGAATAAGAACTCAAA
GTAGAAGGATCATTTCCCTAGAATTATCTTGAAACATGAAGCAAAGTCCTCAATTCTTTG
TGCATGATACACATCCATTTAGATGAAGCCTGAGGAGGCTGTGGATTGAGTGATTGTGGG
CACAACACCTTCATCCCTTTGTGATCAATGGCAATGCTTATGGTTTGAAACTGCAGTCTC
TGTTGGTGGGGTTTCTCAAGTTCTGAAATAGCCTGGCTTCTTGATCTTCATCGTATTCTT
CAGAGGTGCAACATAGATGTCTTGGAGCAGCACTAACTGTTATAGTGATTTATGGTCTTG
TCATTTTGTTTCTCTCCAGTGTCAAACTTTCTGTTCTTCTGGAATATTGTTACTTCAAAC
AATTAATTTGAATCCTT