Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0088g00060.t01
CDS Infomation

cds chromosome:12X:3:8069862:8072808:-1 gene:VIT_03s0088g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGTGTGTTAAGTATCATTCTCATATTTGGTGGTACAGGTTATATTGGTAGATAT
ATGGTTAAGGCCAGCGTTAAGATGGGTCATCCAACGTACGTTTATTCTAGGCCTATGACT
CCACAAACACATCCCTCCAAGATAGAACTTCTCAAAGAGTTCCAGTCCATGGGCGTCAAC
ATTGTCCAAGGAGAACTGGATGAGCATGAGAAGCTTGTGTCGGTGATTCAACAAGTAGAT
GTGGTCATCTCGGCCCTTGCATATCCCCAAGTTCTTGACCAACTCAAAATTATAGATGCC
ATCAAAGTTGCAGGCACATCAAAAAGGTTTCTTCCATCTGATTTTGGAGTTGAGGAGGAT
AGGGTGACTGTTCTTTCCCCATTCCAAGAATTCCTTGATAAGAAGAGGATTATCAGAAGA
GCCATTGAAGCTGCTGGGATTTCTTACACATTTGTGTCTGCTAGCTGCTTTGGTGCATAC
TTTGTGAATTACTTGCTCCATCCACATGACTATTCAAACGATAGTATTACCGTCTATGGC
AGTGGTGAAGCCCAGGCGGTGTTAAATTATGAAGAAGACATTGCTCTTTATACAATCAAG
GTGGCAAATGATCCCACAGCCTGCAATCGGATAGTCATTTTTCTACCCCCCAAAAACATT
ATTTCGCAGCTCGAATTGATCGCTCTTTGGGAGAAGAAGACTGGTAGAAGCTTCAAGAGA
GTTCATGTCTCAGAGGAAGAGCTTGTGAAGCTATCTGAGACCCTGCCAAATCCGCAAAAC
ATACCCGTGGCCATCCTTCACAGTATATTCGTAAAAGGGGTTCTAATGAATTTCGAAATA
GGGGAAGATGACATCGAGGTTTCAAAACTATATCCTGATATTAACTATCATACCATTGAT
CAGCTCCTCCATATTTTTCTCACAAATCCCCCCAGCCCTTGTTCTGCTGCCTTCGAATGA

Peptide Sequence

PEP ID

VIT_03s0088g00060.t01
PEP Infomation

pep chromosome:12X:3:8069862:8072808:-1 gene:VIT_03s0088g00060 transcript:VIT_03s0088g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESVLSIILIFGGTGYIGRYMVKASVKMGHPTYVYSRPMTPQTHPSKIELLKEFQSMGVN
IVQGELDEHEKLVSVIQQVDVVISALAYPQVLDQLKIIDAIKVAGTSKRFLPSDFGVEED
RVTVLSPFQEFLDKKRIIRRAIEAAGISYTFVSASCFGAYFVNYLLHPHDYSNDSITVYG
SGEAQAVLNYEEDIALYTIKVANDPTACNRIVIFLPPKNIISQLELIALWEKKTGRSFKR
VHVSEEELVKLSETLPNPQNIPVAILHSIFVKGVLMNFEIGEDDIEVSKLYPDINYHTID
QLLHIFLTNPPSPCSAAFE

Transcript Sequence

Transcript ID

VIT_03s0088g00060.t01
Transcript Infomation

cdna chromosome:12X:3:8069862:8072808:-1 gene:VIT_03s0088g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTAGTGGGAAAGCAATGGAGAGTGTGTTAAGTATCATTCTCATATTTGGTGGTACAGGTT
ATATTGGTAGATATATGGTTAAGGCCAGCGTTAAGATGGGTCATCCAACGTACGTTTATT
CTAGGCCTATGACTCCACAAACACATCCCTCCAAGATAGAACTTCTCAAAGAGTTCCAGT
CCATGGGCGTCAACATTGTCCAAGGAGAACTGGATGAGCATGAGAAGCTTGTGTCGGTGA
TTCAACAAGTAGATGTGGTCATCTCGGCCCTTGCATATCCCCAAGTTCTTGACCAACTCA
AAATTATAGATGCCATCAAAGTTGCAGGCACATCAAAAAGGTTTCTTCCATCTGATTTTG
GAGTTGAGGAGGATAGGGTGACTGTTCTTTCCCCATTCCAAGAATTCCTTGATAAGAAGA
GGATTATCAGAAGAGCCATTGAAGCTGCTGGGATTTCTTACACATTTGTGTCTGCTAGCT
GCTTTGGTGCATACTTTGTGAATTACTTGCTCCATCCACATGACTATTCAAACGATAGTA
TTACCGTCTATGGCAGTGGTGAAGCCCAGGCGGTGTTAAATTATGAAGAAGACATTGCTC
TTTATACAATCAAGGTGGCAAATGATCCCACAGCCTGCAATCGGATAGTCATTTTTCTAC
CCCCCAAAAACATTATTTCGCAGCTCGAATTGATCGCTCTTTGGGAGAAGAAGACTGGTA
GAAGCTTCAAGAGAGTTCATGTCTCAGAGGAAGAGCTTGTGAAGCTATCTGAGACCCTGC
CAAATCCGCAAAACATACCCGTGGCCATCCTTCACAGTATATTCGTAAAAGGGGTTCTAA
TGAATTTCGAAATAGGGGAAGATGACATCGAGGTTTCAAAACTATATCCTGATATTAACT
ATCATACCATTGATCAGCTCCTCCATATTTTTCTCACAAATCCCCCCAGCCCTTGTTCTG
CTGCCTTCGAATGAGGTT