Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g02480.t01
CDS Infomation

cds chromosome:12X:3:5692422:5706978:-1 gene:VIT_03s0063g02480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGTAGCGGAACTCAAAGAGCGCCACATGGCGGCCACCGAGACTGTGAACTCTCTC
AGAGAACGCTTGAAGCAGAAGCGACTTTTGCTTCTAGACACTGATGTGGCGGGATACGCA
AGGGCACAGGGGAAGAGTCCGGTGACCTTTGGACCGACGGATCTGGTGTGCTGCAGGACG
TTGCAGGGGCATACGGGGAAGGTGTATTCATTGGACTGGACTACAGAAAAGAACCGAATT
GTCAGTGCTTCGCAAGATGGCCGGTTAATAGTTTGGAATGCCCTGACAAGCCAGAAAACT
CATGCCATAAAGCTGCCTTGTGCATGGGTCATGACATGTGCTTTTTCTCCGAGTGGGCAG
TCTGTTGCCTGTGGCGGTCTAGATAGTGTATGCTCAATCTTCAATCTGAATTCCCCCACA
GACAAGGATGGCAATTTAGCAATGTCAAAAATGCTTAGTGGACATAAGGGTTATGTGTCC
TCTTGTCAGTATGTCCCAGATGAGGACACTCACCTAATAACCAGTTCTGGTGATCAGACA
TGTGTTCTATGGGATATTACCACAGGGCTCAGAACTTCTGTGTTTGGAGGTGAATTTCAA
TCTGGACACACTGCTGATGTATTGAGTGTCTCAATTAGTGGATCAAACTCAAGAATGTTT
GTATCTGGTTCATGTGATGCAACTGCCCGTTTGTGGGACACTCGTGCTGCAAGTCGAGCT
GTGCGTACATTTCATGGCCATGAGGGAGATGTTAATACTGTGAGGTTCTTTCCAGATGGG
AATAGATTTGGGACTGGCTCAGACGATGGAACTTGCAGATTATTTGACATCAGGACAGGT
CACCAACTCCAAGTATATTATCAAGAACATGGTGATAACGAAGCCCCACACGTGACCTCC
ATTGCATTCTCCATATCAGGCAGACTTCTCTTTGCTGGATACTCAAATGGGGATTGCTAT
GTCTGGGATACTTTATTGGCAAAGGTGGTTCTGAACCTGGGATCTCTCCAAAACTCACAT
GATAGTCGGATCAGCTGTTTAGGTTTGTCAGCTGATGGGAGTGCCTTATGTACAGGAAGT
TGGGACACAAACCTTAAGATTTGGGCTTTTGGAGGACACAGGAGAGTGATTTGA

Peptide Sequence

PEP ID

VIT_03s0063g02480.t01
PEP Infomation

pep chromosome:12X:3:5692422:5706978:-1 gene:VIT_03s0063g02480 transcript:VIT_03s0063g02480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVAELKERHMAATETVNSLRERLKQKRLLLLDTDVAGYARAQGKSPVTFGPTDLVCCRT
LQGHTGKVYSLDWTTEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQ
SVACGGLDSVCSIFNLNSPTDKDGNLAMSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQT
CVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDATARLWDTRAASRA
VRTFHGHEGDVNTVRFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQEHGDNEAPHVTS
IAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHDSRISCLGLSADGSALCTGS
WDTNLKIWAFGGHRRVI

Transcript Sequence

Transcript ID

VIT_03s0063g02480.t01
Transcript Infomation

cdna chromosome:12X:3:5692422:5706978:-1 gene:VIT_03s0063g02480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAAACGAACCACCTGGTACAGCGTGGGAGCTGGCGGCGTCAGTCAACAACCTCACCAC
CACCACCACCACCTCCACCACCTCCTCCTCTTCCGTCACCTATAAATCTTACTTCGCTTT
GCGCTTTCTGTACATTAATCTAAATTTTGCTCAAATCTCCTCATCAGCAAAACCTAAATT
TCATTTCTCAGAAATTAAGACTTAAAGCGAAGCTTTCTTTAATGGCGAGGGGAAACTGTT
AAGAGTATTAAATATGTCTGTAGCGGAACTCAAAGAGCGCCACATGGCGGCCACCGAGAC
TGTGAACTCTCTCAGAGAACGCTTGAAGCAGAAGCGACTTTTGCTTCTAGACACTGATGT
GGCGGGATACGCAAGGGCACAGGGGAAGAGTCCGGTGACCTTTGGACCGACGGATCTGGT
GTGCTGCAGGACGTTGCAGGGGCATACGGGGAAGGTGTATTCATTGGACTGGACTACAGA
AAAGAACCGAATTGTCAGTGCTTCGCAAGATGGCCGGTTAATAGTTTGGAATGCCCTGAC
AAGCCAGAAAACTCATGCCATAAAGCTGCCTTGTGCATGGGTCATGACATGTGCTTTTTC
TCCGAGTGGGCAGTCTGTTGCCTGTGGCGGTCTAGATAGTGTATGCTCAATCTTCAATCT
GAATTCCCCCACAGACAAGGATGGCAATTTAGCAATGTCAAAAATGCTTAGTGGACATAA
GGGTTATGTGTCCTCTTGTCAGTATGTCCCAGATGAGGACACTCACCTAATAACCAGTTC
TGGTGATCAGACATGTGTTCTATGGGATATTACCACAGGGCTCAGAACTTCTGTGTTTGG
AGGTGAATTTCAATCTGGACACACTGCTGATGTATTGAGTGTCTCAATTAGTGGATCAAA
CTCAAGAATGTTTGTATCTGGTTCATGTGATGCAACTGCCCGTTTGTGGGACACTCGTGC
TGCAAGTCGAGCTGTGCGTACATTTCATGGCCATGAGGGAGATGTTAATACTGTGAGGTT
CTTTCCAGATGGGAATAGATTTGGGACTGGCTCAGACGATGGAACTTGCAGATTATTTGA
CATCAGGACAGGTCACCAACTCCAAGTATATTATCAAGAACATGGTGATAACGAAGCCCC
ACACGTGACCTCCATTGCATTCTCCATATCAGGCAGACTTCTCTTTGCTGGATACTCAAA
TGGGGATTGCTATGTCTGGGATACTTTATTGGCAAAGGTGGTTCTGAACCTGGGATCTCT
CCAAAACTCACATGATAGTCGGATCAGCTGTTTAGGTTTGTCAGCTGATGGGAGTGCCTT
ATGTACAGGAAGTTGGGACACAAACCTTAAGATTTGGGCTTTTGGAGGACACAGGAGAGT
GATTTGAGTTGTTAAAGGAGAAAATGGCCTCCAAGTTACCTTCTGTCCCTGGTCTGTGGT
TCTTATTGTATTTTCAATGCAGTGTAGTCCCTGGGGTCCCATTTTGTATCGAGTCGCTTA
CTGTGGGCTGAGGAACCATAACCGTGTACTGCTTCTTGTAATCCTCATTTGAAAAATTGA
CAGTTGGATTATTAGAGAGAAAAAAGGGGGAATGTTGCTGGAGAACTTGGAACTGGAGGG
GTTATTTGTTTGTTTATGTGCATCTACAAAAAAAACTTGCCT