Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g02310.t01
CDS Infomation

cds chromosome:12X:3:5563593:5567379:1 gene:VIT_03s0063g02310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGAAATTTGGGAGAGAGCCGTTGAAACGGCGATCGACGGCAAAACTGATGCATCT
CCGGTCCGGTCGCTAACCCTGGACGGCGCTGTGAAATGCTACAGTGGCGGTCTACCACCG
CCGACACTTCTCGAGAAATTCCAAAATCTCGAACACCTATCAATCGCCAACGTCGGGTTG
TCGTCGCTCGAGAAATTCCCGAGACTTGGAAATCTCCAGCGACTGATTCTCTCCGACAAC
AGAATCTCCGGTGGCCTCGAATTCCTCGTTGAAGCGAATCTCCAGTCGCTTCGGGACTTG
GATTTGTCGAACAATCGGATTCAGTACTTCGAGGACTTGGCTCCTCTGGCTCGGCTCAAG
CTAGTTTCGCTGGACTTGTATGAGTGTCCTGTGACGAAGATTAAGGATTATAGGGCTAGG
GTTTTTGGATTGATTGAGACGTTGAAGTACTTGGACAAGCTAGATTTTGACGAGAATGAA
GAGGACGATGAAGATGAAGACGAGGAAGATGATGGTGAAGTTGACGGTGAGGATCGATCG
AGGTCGGGGGGTGTTGGTAGTAGCAGGGGTGGCGATGGAGTGATTGATGTTGATGAGGAT
GAGAGTGAAGAAGATGGAGTTGTTGGCCTCGAAAACGGGGATGTCGAAGATGATGATGAT
TTAGAGGACGTTGATGTTGAGGAGAGTGGTGACGATGAGGTTGTGGAGGTTCATGAGATT
GATGATAGTGACGAGGAAGAAGGGGTCGAAGAGGATGATGATGAGGAGGATGATGATGGT
GATGAAGAAGTGGAAGATGAAGAGGAGGATGTGAGGCCCGGGATTGAAGGCCGGGGAATC
GGTAATGGTGGGGAAATTGATGGGCATGAGCAAGGTGAGGAGGACAGTGATGATGACGGT
GAGTATGAGGAAGAAGACGGTGAGGACGAGGAAGAAGCTTTCCATATCCGCCCAGTTAGG
CGTGCAGAAGAAGATGGTGAAGCAAGTGATGTGGACCCTGAAAATGAAGTAGATGATGTT
GTTGAAGTGGAGGAAGAGGTTGAAGATGCGGTGCAACTACCCAGAGAAGCTCAGCTACCC
TCTTCTTCCCAGTCCCGTCTCAAGAGGAAGAGAGATGAAGAAAATGACGGTGCCGACATC
AGCGATGATGAAAGCGTTGAGGATGTCTCATTGAAGCCTCATTAA

Peptide Sequence

PEP ID

VIT_03s0063g02310.t01
PEP Infomation

pep chromosome:12X:3:5563593:5567379:1 gene:VIT_03s0063g02310 transcript:VIT_03s0063g02310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDEIWERAVETAIDGKTDASPVRSLTLDGAVKCYSGGLPPPTLLEKFQNLEHLSIANVGL
SSLEKFPRLGNLQRLILSDNRISGGLEFLVEANLQSLRDLDLSNNRIQYFEDLAPLARLK
LVSLDLYECPVTKIKDYRARVFGLIETLKYLDKLDFDENEEDDEDEDEEDDGEVDGEDRS
RSGGVGSSRGGDGVIDVDEDESEEDGVVGLENGDVEDDDDLEDVDVEESGDDEVVEVHEI
DDSDEEEGVEEDDDEEDDDGDEEVEDEEEDVRPGIEGRGIGNGGEIDGHEQGEEDSDDDG
EYEEEDGEDEEEAFHIRPVRRAEEDGEASDVDPENEVDDVVEVEEEVEDAVQLPREAQLP
SSSQSRLKRKRDEENDGADISDDESVEDVSLKPH

Transcript Sequence

Transcript ID

VIT_03s0063g02310.t01
Transcript Infomation

cdna chromosome:12X:3:5563593:5567379:1 gene:VIT_03s0063g02310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTCTCTCGAGCAAGAACAGGAGAGAAAGCAGACAGAAAGTAATAGAACAGAGAGGGAG
AAAGGAGAGAGTGAAGCTATTCCTTCATCCGAATCTCTACAGTTTCTATATTTGTTTAGT
TTTCTCTACGATAATTTGTATGTTCAATGGATACAGTCCGCAGACCCTAGGGCTTCAATT
TCTTCAATGGACGAAATTTGGGAGAGAGCCGTTGAAACGGCGATCGACGGCAAAACTGAT
GCATCTCCGGTCCGGTCGCTAACCCTGGACGGCGCTGTGAAATGCTACAGTGGCGGTCTA
CCACCGCCGACACTTCTCGAGAAATTCCAAAATCTCGAACACCTATCAATCGCCAACGTC
GGGTTGTCGTCGCTCGAGAAATTCCCGAGACTTGGAAATCTCCAGCGACTGATTCTCTCC
GACAACAGAATCTCCGGTGGCCTCGAATTCCTCGTTGAAGCGAATCTCCAGTCGCTTCGG
GACTTGGATTTGTCGAACAATCGGATTCAGTACTTCGAGGACTTGGCTCCTCTGGCTCGG
CTCAAGCTAGTTTCGCTGGACTTGTATGAGTGTCCTGTGACGAAGATTAAGGATTATAGG
GCTAGGGTTTTTGGATTGATTGAGACGTTGAAGTACTTGGACAAGCTAGATTTTGACGAG
AATGAAGAGGACGATGAAGATGAAGACGAGGAAGATGATGGTGAAGTTGACGGTGAGGAT
CGATCGAGGTCGGGGGGTGTTGGTAGTAGCAGGGGTGGCGATGGAGTGATTGATGTTGAT
GAGGATGAGAGTGAAGAAGATGGAGTTGTTGGCCTCGAAAACGGGGATGTCGAAGATGAT
GATGATTTAGAGGACGTTGATGTTGAGGAGAGTGGTGACGATGAGGTTGTGGAGGTTCAT
GAGATTGATGATAGTGACGAGGAAGAAGGGGTCGAAGAGGATGATGATGAGGAGGATGAT
GATGGTGATGAAGAAGTGGAAGATGAAGAGGAGGATGTGAGGCCCGGGATTGAAGGCCGG
GGAATCGGTAATGGTGGGGAAATTGATGGGCATGAGCAAGGTGAGGAGGACAGTGATGAT
GACGGTGAGTATGAGGAAGAAGACGGTGAGGACGAGGAAGAAGCTTTCCATATCCGCCCA
GTTAGGCGTGCAGAAGAAGATGGTGAAGCAAGTGATGTGGACCCTGAAAATGAAGTAGAT
GATGTTGTTGAAGTGGAGGAAGAGGTTGAAGATGCGGTGCAACTACCCAGAGAAGCTCAG
CTACCCTCTTCTTCCCAGTCCCGTCTCAAGAGGAAGAGAGATGAAGAAAATGACGGTGCC
GACATCAGCGATGATGAAAGCGTTGAGGATGTCTCATTGAAGCCTCATTAACAACAGAGT
TTTGAGGGTGTCTGGATGAAGGCCCCCTAGAGTTGACAGTTGACACCACCTCACGGCCCT
ATAACGTGGGATGCTTCACCTATTACTCAGAAGGAAGCTGGAGGAAAAAGGGAAGGTTTT
GACTGGGGTTTTATAGGGAAAGCCATATATATAAAAATATGTTTCGGGGACGCACGAGGA
AAAAGATTTCATCCTTTGTGGATGGTTTTTATTAAATTGTTCAAAAAGCAGTTGGATCTT
TGTCAGCACA