Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g02300.t01
CDS Infomation

cds chromosome:12X:3:5554237:5560438:-1 gene:VIT_03s0063g02300 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:D7TPZ3]
Sequence

ATGGTAGCTTCAGCTATATCAACGACCTTGAGTTCCTCTATTGTTTCTCGCAACACTTCC
TCGTCCATTTCATTTTTTTCTCCCAGATACTCAACAAAACCAATTGTTTCTGCTTTGTCC
AAATCTTCAAGTATTGGATTATCTAGCAAAACTTCTGGGTTAAGTCTAAAGGTTGATGAA
CGGGGTCGCCATGCTGGTAATCCGAGTTATGGTGCAATAGAAGCCAAAAAGGGGAACCCA
CCCGTAGCGCCATCTGTGATGACTCCTGGAGGACCTTTGGACCTATCAACTGTTCTATTC
AGGAGTCGAATTATTTTCATCGGGCAGCCAATCAATTCAATGGTGGCTCAGCGAGTTATC
TCACAGCTTGTGACTCTCGCAGCTATTGATGAGGATGCAGATATTCTGATGTATCTCAAC
TGCCCTGGTGGAAGCACCTATTCTGTATTGGCCATCTATGATTGCATGGCTTGGATAAAG
CCTAAGGTTGGAACAGTATGTTTTGGCGTAGCTGCAAGTCAAGGAGCACTTCTTCTTGCT
GGTGGGGAAAAGGGAATGCGTTATGCAATGCCAAATGCACGTATTATGGTACACCAACCG
CAGGGTGGATGTGGGGGCCACGTGGAGGATGTAAGGCGCCAAGTGAATGAAGCAGTTCAA
TCTCGCCATAAAATTGACAAGATGTATGCTGCTTTTACTGGCCAACCTCTCGAGCAAGTG
CAACAATACACTGAGAGGGATCGTTTCTTATCTGCTTCTGAGGCCATGGAGTTTGGCTTC
ATCGACGGTATCCTAGAAACCGAGTACTAA

Peptide Sequence

PEP ID

VIT_03s0063g02300.t01
PEP Infomation

pep chromosome:12X:3:5554237:5560438:-1 gene:VIT_03s0063g02300 transcript:VIT_03s0063g02300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:D7TPZ3]
Sequence

MVASAISTTLSSSIVSRNTSSSISFFSPRYSTKPIVSALSKSSSIGLSSKTSGLSLKVDE
RGRHAGNPSYGAIEAKKGNPPVAPSVMTPGGPLDLSTVLFRSRIIFIGQPINSMVAQRVI
SQLVTLAAIDEDADILMYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLA
GGEKGMRYAMPNARIMVHQPQGGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEQV
QQYTERDRFLSASEAMEFGFIDGILETEY

Transcript Sequence

Transcript ID

VIT_03s0063g02300.t01
Transcript Infomation

cdna chromosome:12X:3:5554237:5560438:-1 gene:VIT_03s0063g02300 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:D7TPZ3]
Sequence

TCTCTCTCCCTCTCTCGCTCCCTCTCTCTGTGTCCATCACTCTGTAGCAGAGAGACGAAA
TGGTAGCTTCAGCTATATCAACGACCTTGAGTTCCTCTATTGTTTCTCGCAACACTTCCT
CGTCCATTTCATTTTTTTCTCCCAGATACTCAACAAAACCAATTGTTTCTGCTTTGTCCA
AATCTTCAAGTATTGGATTATCTAGCAAAACTTCTGGGTTAAGTCTAAAGGTTGATGAAC
GGGGTCGCCATGCTGGTAATCCGAGTTATGGTGCAATAGAAGCCAAAAAGGGGAACCCAC
CCGTAGCGCCATCTGTGATGACTCCTGGAGGACCTTTGGACCTATCAACTGTTCTATTCA
GGAGTCGAATTATTTTCATCGGGCAGCCAATCAATTCAATGGTGGCTCAGCGAGTTATCT
CACAGCTTGTGACTCTCGCAGCTATTGATGAGGATGCAGATATTCTGATGTATCTCAACT
GCCCTGGTGGAAGCACCTATTCTGTATTGGCCATCTATGATTGCATGGCTTGGATAAAGC
CTAAGGTTGGAACAGTATGTTTTGGCGTAGCTGCAAGTCAAGGAGCACTTCTTCTTGCTG
GTGGGGAAAAGGGAATGCGTTATGCAATGCCAAATGCACGTATTATGGTACACCAACCGC
AGGGTGGATGTGGGGGCCACGTGGAGGATGTAAGGCGCCAAGTGAATGAAGCAGTTCAAT
CTCGCCATAAAATTGACAAGATGTATGCTGCTTTTACTGGCCAACCTCTCGAGCAAGTGC
AACAATACACTGAGAGGGATCGTTTCTTATCTGCTTCTGAGGCCATGGAGTTTGGCTTCA
TCGACGGTATCCTAGAAACCGAGTACTAAAATTCCAGCCATCCATGGAAGATTATTCAAT
GCAAATTTGGAACTTGGTGCTGCAGATTGCTGTTTTGAGGATGATCAATTGTACCTTCAT
GTGTGATGTTGCGAATGGTGCCATATCATGGTGCCTATAGATTTTAATGCTAATTAGTTG
AGGTTCTGATTATAGAAATACAAGATTGTTTTATTTTAACTCACTTTTTGTCAGACTAAT
TTATTGATTTTA