Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g01830.t01
CDS Infomation

cds chromosome:12X:3:5160926:5173965:-1 gene:VIT_03s0063g01830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCTCTTCTTCTTCCTCTCTTCCCCTCAATTTCGTCAACTCATCTTCATCATCAAAA
CTTCCACTGCGATCCATCCCGGGTGATTGTGGCTCACCCTTCTTTGGGCCCATTAAGGAT
CGTTTCGACTACTTCTACAATGAAGGCCGTGACCAGTTCTTCAGAACTCGCATGCAGAAA
TATCAATCCACGGTCTTCAGAGCCAACATGCCACCCGGCCCTTTCATGGCTTTCAACCCT
AATGTCGTTGTCCTCCTCGACGCCATCAGCTTTCCCATCCTTTTCGACACCTCCAGAATT
GAAAAGAGAAATGTCCTCGACGGCACATACATGCCCTCCACCGCCTTCACTGGTGGCTAC
CGTGTCTGTGCATATCTTGACCCTTCCGAGCCCAACCACGCCCTTCTCAAACGCTTTTTC
ACGTCCTCGCTCGCAGCTCGACACCATAACTTCATTCCTGTGTTTCGTAGCTGCTTAACA
GAGCTCTTCACCACCCTCGAAGACGATGTTTCCAGAAAAGGGAAAGCCGATTTCAATGGC
ATATCTGATAACATGTCTTTCAACTTCGTCTTCAAACTCTTCTGCGATAAGCATCCCTCC
GAGACCAAACTCGGATCAAATGGACCCAATCTTGTTACAAAATGGTTGTTCCTCCAACTC
GCACCTCTCATCACGCTTGGATTGTCCATGTTACCAAACGTTGTAGAAGATTTACTTCTA
CACACCTTTCCCTTACCCTCATTATTCGTAAAATCCGATTATAAGAAGCTTTACCATGCT
TTTTACGCATCGGCGTCCTCGTTATTGGATGAAGCCGAGAGCATGGGGATCAAGAGAGAT
GAAGCTTGCCATAACCTTGTGTTTCTTGCTGGTTTCAACGCATACGGTGGCATGAAGACC
CTGTTTCCTGCTTTGATCAAGTGGGTTGGCTTAGCCGGAGGGAAATTACACCGCCAGTTG
GCTGATGAGATCAGGAGCATCGTTAAGGCTGAGGGAGGAGTGACATTTGCGGCGTTGGAC
AAAATGGCTTTGACTAAATCGGTTGTGTACGAGGCTCTGAGGATTGAACCTCCGGTTCCA
TTCCAGTACGGGAAGGCCAAGGAGGATATGGTGATCCACAGCCATGACGCTGCATTTGAG
ATCAAGAAAGGGGAGATGATATTCGGATATCAGCCATTTGCCACCAAGGATCCCAAGGTT
TTCGACAATCCTGAGGAGTTTGTGGCCCACAGGTTCATGGGCGATGGAGAGAAATTGCTC
GAGTACGTGTATTGGTCTAATGGACGCGAGTCAGATGATCCAACGGTGGAGAACAAACAG
TGTCCGGGAAAGGATCTGGTGGTCCTGCTGTCCAGGGTAATGCTGGTGGAGTTTTTCCTC
CATTACGACACGTTCGACATTGAGTGTGGAACCTTGCTGTTGGGATCATCAGTGACGTTC
AAGTCGTTGACCAAGCAACCTACATTTGATCACAATTTCTTTCAATTACCAGCAAAATTA
GGGCTGAGAATGGAATTCCCAAACCCTAAAACAAAAAGAATTCCCAAATCTGAAAACAGT
CTAGGATTCGGTTTTATAAATTACAAAAAGAACAACCATAATAAAGATGAAAAGCAACGA
AGGAAGAAAAAGGAAATGAGAGAGGAGAGAGGAGACGCAGAGAGAGCAGCAGTCTCACCT
TCTGGTGGGGAACACCAAGGACGAACATGCCAATTCTAA

Peptide Sequence

PEP ID

VIT_03s0063g01830.t01
PEP Infomation

pep chromosome:12X:3:5160926:5173965:-1 gene:VIT_03s0063g01830 transcript:VIT_03s0063g01830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSSSSSLPLNFVNSSSSSKLPLRSIPGDCGSPFFGPIKDRFDYFYNEGRDQFFRTRMQK
YQSTVFRANMPPGPFMAFNPNVVVLLDAISFPILFDTSRIEKRNVLDGTYMPSTAFTGGY
RVCAYLDPSEPNHALLKRFFTSSLAARHHNFIPVFRSCLTELFTTLEDDVSRKGKADFNG
ISDNMSFNFVFKLFCDKHPSETKLGSNGPNLVTKWLFLQLAPLITLGLSMLPNVVEDLLL
HTFPLPSLFVKSDYKKLYHAFYASASSLLDEAESMGIKRDEACHNLVFLAGFNAYGGMKT
LFPALIKWVGLAGGKLHRQLADEIRSIVKAEGGVTFAALDKMALTKSVVYEALRIEPPVP
FQYGKAKEDMVIHSHDAAFEIKKGEMIFGYQPFATKDPKVFDNPEEFVAHRFMGDGEKLL
EYVYWSNGRESDDPTVENKQCPGKDLVVLLSRVMLVEFFLHYDTFDIECGTLLLGSSVTF
KSLTKQPTFDHNFFQLPAKLGLRMEFPNPKTKRIPKSENSLGFGFINYKKNNHNKDEKQR
RKKKEMREERGDAERAAVSPSGGEHQGRTCQF

Transcript Sequence

Transcript ID

VIT_03s0063g01830.t01
Transcript Infomation

cdna chromosome:12X:3:5160926:5173965:-1 gene:VIT_03s0063g01830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTGGAAAAAAGAAAAGAAAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAA
TCGAGAAATGGTCCAAATTTTTTTTTTCTCTTTTCCCCTTATTCCCATCTCCCCATCCCA
GCCGTTCATTCCCCTCTTTAATGTGATCCGAACCGTTTGATTGTTTGACCCAGAAATCCA
CCAATCAATCGTTCGCCCACATTAGCTGATCACTTTTTGCAGCTGCTACACAGTGAATCC
ATCTGGGTTTTTTTGTTGAAGACGACGTTTCAGTTTTTTCATTCATCTTTTCATTTGTTC
GTGTACAGAGTATATATAGAGGGTAATCACCATTCTAAGAATGTGAAATAATAATACAAG
AAAAGAATGATATAAGAAAATAACAACTAATATCCTAATATCTCAACTTTCCTAATATCT
CAATATTCCTAATATCTCAATTTTGCTAATATCTAAACATTCCTAATATCTCAACACTAA
ATGATATAAGGAAAGAATGATATAAGGAAACATTCCTAATATCTCAAGCCACCACCATGT
CCTCTTCTTCTTCCTCTCTTCCCCTCAATTTCGTCAACTCATCTTCATCATCAAAACTTC
CACTGCGATCCATCCCGGGTGATTGTGGCTCACCCTTCTTTGGGCCCATTAAGGATCGTT
TCGACTACTTCTACAATGAAGGCCGTGACCAGTTCTTCAGAACTCGCATGCAGAAATATC
AATCCACGGTCTTCAGAGCCAACATGCCACCCGGCCCTTTCATGGCTTTCAACCCTAATG
TCGTTGTCCTCCTCGACGCCATCAGCTTTCCCATCCTTTTCGACACCTCCAGAATTGAAA
AGAGAAATGTCCTCGACGGCACATACATGCCCTCCACCGCCTTCACTGGTGGCTACCGTG
TCTGTGCATATCTTGACCCTTCCGAGCCCAACCACGCCCTTCTCAAACGCTTTTTCACGT
CCTCGCTCGCAGCTCGACACCATAACTTCATTCCTGTGTTTCGTAGCTGCTTAACAGAGC
TCTTCACCACCCTCGAAGACGATGTTTCCAGAAAAGGGAAAGCCGATTTCAATGGCATAT
CTGATAACATGTCTTTCAACTTCGTCTTCAAACTCTTCTGCGATAAGCATCCCTCCGAGA
CCAAACTCGGATCAAATGGACCCAATCTTGTTACAAAATGGTTGTTCCTCCAACTCGCAC
CTCTCATCACGCTTGGATTGTCCATGTTACCAAACGTTGTAGAAGATTTACTTCTACACA
CCTTTCCCTTACCCTCATTATTCGTAAAATCCGATTATAAGAAGCTTTACCATGCTTTTT
ACGCATCGGCGTCCTCGTTATTGGATGAAGCCGAGAGCATGGGGATCAAGAGAGATGAAG
CTTGCCATAACCTTGTGTTTCTTGCTGGTTTCAACGCATACGGTGGCATGAAGACCCTGT
TTCCTGCTTTGATCAAGTGGGTTGGCTTAGCCGGAGGGAAATTACACCGCCAGTTGGCTG
ATGAGATCAGGAGCATCGTTAAGGCTGAGGGAGGAGTGACATTTGCGGCGTTGGACAAAA
TGGCTTTGACTAAATCGGTTGTGTACGAGGCTCTGAGGATTGAACCTCCGGTTCCATTCC
AGTACGGGAAGGCCAAGGAGGATATGGTGATCCACAGCCATGACGCTGCATTTGAGATCA
AGAAAGGGGAGATGATATTCGGATATCAGCCATTTGCCACCAAGGATCCCAAGGTTTTCG
ACAATCCTGAGGAGTTTGTGGCCCACAGGTTCATGGGCGATGGAGAGAAATTGCTCGAGT
ACGTGTATTGGTCTAATGGACGCGAGTCAGATGATCCAACGGTGGAGAACAAACAGTGTC
CGGGAAAGGATCTGGTGGTCCTGCTGTCCAGGGTAATGCTGGTGGAGTTTTTCCTCCATT
ACGACACGTTCGACATTGAGTGTGGAACCTTGCTGTTGGGATCATCAGTGACGTTCAAGT
CGTTGACCAAGCAACCTACATTTGATCACAATTTCTTTCAATTACCAGCAAAATTAGGGC
TGAGAATGGAATTCCCAAACCCTAAAACAAAAAGAATTCCCAAATCTGAAAACAGTCTAG
GATTCGGTTTTATAAATTACAAAAAGAACAACCATAATAAAGATGAAAAGCAACGAAGGA
AGAAAAAGGAAATGAGAGAGGAGAGAGGAGACGCAGAGAGAGCAGCAGTCTCACCTTCTG
GTGGGGAACACCAAGGACGAACATGCCAATTCTAA