Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g01800.t01
CDS Infomation

cds chromosome:12X:3:5135440:5144942:1 gene:VIT_03s0063g01800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome assembly chaperone 2 [Source:UniProtKB/TrEMBL;Acc:D7TPV2]
Sequence

ATGGAGTTTATTGTAGAAGAAGGCAAACACCTCAACAACGATTGCTCCACTCTTGTTCTG
CCTGCTTTGTCGATTGGAAATGTAGGGCAGTTGGCGGTGGACCTCTTGATCTCGTCTACG
AGAGCGGAGAGAATAGGTTATTTGGATGACCCTTATGTGCTACCTTGTGTTGGCAATGAT
GCATATGGCCCTATACCACGAGGCGAGGTTGCTCTGCCTCTCGAAGCTTATGATTCTTCT
CTTAATAAATTGACACTTGTCCAACAAAGATCTCCAGTTCTTAAGGGGATGATGGTTGAA
TTTGCTAAGAATTTGGCTTATTTTGCTGCTGACAGTGGGAAGAAGCATGTTATTGTGCTC
TCTAGCCTAGATTTTGGGCAGTGGCAAAGGATTGATATGTCAAGTGGTTCACAGATATAT
TACATCTCCAGTGCCAATATGGATGGAGCAGACGATGACTGTGAAAAACTAGGGTGGAAA
AAATTACATGAATATAACCCTGCTCAGAGGCGATGGAAGTATCTTAGTACATTAGCTGCA
GGAAATGCTATGCAGGAAGATGGTTTGGCTTTTGAAGATGAACTTGAAGACGAAGAAGAT
TACTACCCAAGTTTGCCATTTGCTGCACTTTTATCTTGTTTTAAGGCCAAAGGTTTGAAG
GTAACTTGCTTATTATGTTACTGCTCAGAAGGGGACAATATACCTGATGCTTTCAATCTG
GCTGACGCGGCATGCAAACTTCTTGAGCTTAGCCCCCAAAATTTCCATGGTGATCAAGGT
GGTAATTGGGCTATTCCATTTTCATGGAAGACTGTTTATGGGCCACCCCCAGATATGTCT
CTCTTTTAG

Peptide Sequence

PEP ID

VIT_03s0063g01800.t01
PEP Infomation

pep chromosome:12X:3:5135440:5144942:1 gene:VIT_03s0063g01800 transcript:VIT_03s0063g01800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome assembly chaperone 2 [Source:UniProtKB/TrEMBL;Acc:D7TPV2]
Sequence

MEFIVEEGKHLNNDCSTLVLPALSIGNVGQLAVDLLISSTRAERIGYLDDPYVLPCVGND
AYGPIPRGEVALPLEAYDSSLNKLTLVQQRSPVLKGMMVEFAKNLAYFAADSGKKHVIVL
SSLDFGQWQRIDMSSGSQIYYISSANMDGADDDCEKLGWKKLHEYNPAQRRWKYLSTLAA
GNAMQEDGLAFEDELEDEEDYYPSLPFAALLSCFKAKGLKVTCLLCYCSEGDNIPDAFNL
ADAACKLLELSPQNFHGDQGGNWAIPFSWKTVYGPPPDMSLF

Transcript Sequence

Transcript ID

VIT_03s0063g01800.t01
Transcript Infomation

cdna chromosome:12X:3:5135440:5144942:1 gene:VIT_03s0063g01800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome assembly chaperone 2 [Source:UniProtKB/TrEMBL;Acc:D7TPV2]
Sequence

TTTGGGTTTCTTGTTCTCCAATTCTCCGGCTCCAAAATAGCGAACAAAGAGCTTTCTGAA
TAATCTGAATGCTGCAATGGAGTTTATTGTAGAAGAAGGCAAACACCTCAACAACGATTG
CTCCACTCTTGTTCTGCCTGCTTTGTCGATTGGAAATGTAGGGCAGTTGGCGGTGGACCT
CTTGATCTCGTCTACGAGAGCGGAGAGAATAGGTTATTTGGATGACCCTTATGTGCTACC
TTGTGTTGGCAATGATGCATATGGCCCTATACCACGAGGCGAGGTTGCTCTGCCTCTCGA
AGCTTATGATTCTTCTCTTAATAAATTGACACTTGTCCAACAAAGATCTCCAGTTCTTAA
GGGGATGATGGTTGAATTTGCTAAGAATTTGGCTTATTTTGCTGCTGACAGTGGGAAGAA
GCATGTTATTGTGCTCTCTAGCCTAGATTTTGGGCAGTGGCAAAGGATTGATATGTCAAG
TGGTTCACAGATATATTACATCTCCAGTGCCAATATGGATGGAGCAGACGATGACTGTGA
AAAACTAGGGTGGAAAAAATTACATGAATATAACCCTGCTCAGAGGCGATGGAAGTATCT
TAGTACATTAGCTGCAGGAAATGCTATGCAGGAAGATGGTTTGGCTTTTGAAGATGAACT
TGAAGACGAAGAAGATTACTACCCAAGTTTGCCATTTGCTGCACTTTTATCTTGTTTTAA
GGCCAAAGGTTTGAAGGTAACTTGCTTATTATGTTACTGCTCAGAAGGGGACAATATACC
TGATGCTTTCAATCTGGCTGACGCGGCATGCAAACTTCTTGAGCTTAGCCCCCAAAATTT
CCATGGTGATCAAGGTGGTAATTGGGCTATTCCATTTTCATGGAAGACTGTTTATGGGCC
ACCCCCAGATATGTCTCTCTTTTAGGGTTGATGATCCAATGACCTACATAGATAAGGTTT
GGAAGGATGGAAAGCTGGTGCACCTTCGTTCTTTGCCATCTTTGTATTTCAAGTGTTGAG
AATATACTAAGTACCTTTTTTATCAAGGTAAAACAACACGTACAGAAATGAGATGGAATG
AAAGGTCACTCATCTAAGATTATTGATATATTGATTCAGGTAGTCATTCCTTAGTTTTGA
TTTAATTATTTTTGATAAAGACATTGTGAAAATTATGCACATGCCATTTGTGATGATGAC
TAGATTGCCT