Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g01370.t01
CDS Infomation

cds chromosome:12X:3:4814966:4817439:-1 gene:VIT_03s0063g01370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGGCCTTAGGCTGCTTTATTCTTCTGTCTTTCCTTTTCTCTTCGGTCTCATCCTTC
TCTTTGGCTCTTTCTGATGCTGAGGCGTCCCTCATCGCCCGGCGTCAGCTCTTGTCTCTC
CCTGAAGATGGTGATCTCCCTGATGACTTTGAATATGAGATTGATCTTGTTGTAACCTTT
GCCAATTCTAGGCTCCGGAGAGCTTACATTGCTCTTCAGGCATGGAAAAATGCTATGTAC
TCTGACCCTTTTAACACAACTGGCAATTGGGTTGGTGCCAATGTGTGTGCCTATAATGGT
GTCTTCTGTGCTCCGGCTCTTGATGATTCCAACTTGAGTGTTGTTGCTGGTGTTGATATT
AACCATGCCGATATTGCTGGCTACCTTCCAGCTGAGCTGGGGCTTATGACTGATCTTGCG
CTCTTCCATATCAATTCAAACCGGTTTTGTGGAATCATTCCCAAGAGTTTCTCTAGGCTG
CTCCTTATGCATGAGTTTGACATCAGTAACAATCGGTTTGTTGGCCCCTTCCCCACAGTT
GTCCTATCGTTGCCAGCCCTCAGGTACCTCGACATCAGGTTTAATGACTTTGAAGGCAGT
CTGCCGGAAGAGGTCTTTGAGAAGGAACTTGATGCCTTGTTCGTGAATGATAACCGGTTC
ACAGGCTCCATCCCTGAAACTCTAGGCCAGTCAACAGCCTCGGTGGTTGTTTTCGCGAAC
AATAAACTCACTGGATGCATTCCAAAGAGCATTGGGAAGATGGCTAACACATTGAATGAG
ATCGTTTTCTCCAACAATGACTTTGGTGGCTGCTTGCCAACAGAGATCGGAATGCTGGGT
AATGCGACTGTGTTTGCTGCGGGTTCTAACTCCTTCACTGGGGTCCTGCTCAAGAGCTTT
TCAGGCCTAAAGAAGGTGGAGCATCTGGATGTTTCACACAATACACTAACTGGGTTTGTC
CCTGACGGAATCTGCAAGTTGCCTAGTTTGTCGAATTTTACGTTCTCTTACAATTTCTTC
AAGGGAGAGGCTCCATCGTGCCAGCCACCTTCGAGGGCGGACATAACATTGGATGACACA
AGCAATTGTTTGTCGGACAGGCCAAAGCAGAAGTCAGCCAGAACATGTTTACCAGTTGTG
AGTCGGCCGGTAGATTGTAGCAAGTCCAAGTGTGGAGGAAAATCTTCGCCCCCTAAACCA
AGGCCACCAGTCCGTAGTCCAACACCACCCCCGGCTTCCACCCCACGGTCCCCACCTACC
CCTAAACCACAACCCCATCCTTCTCCTTCCCCATCACCTCCTAAACCACAGCCTGCTCCT
CCTAAGTCCACCCCACCAACGCCTAAACCAAGGCCCAGTCCGCCCAAGTCGGTCCCATCG
ACACCCAAACCGCAGCCTAGTCCTTCGCCAGTCTCTGCGCCTCCAACACCAACGCCAACA
CCAACACCAACACCAAAGCCAAAACCATCTCCACACCCACCTAAAACTTCCAGCCCACCT
CCTCCTCATAAGGCCACCCCTCCAACCCCTACACCAAAGCCATCTCCAGCTCCGATTTCT
TCTCCCCCACAACCGTCTCATCCATCTCCCCCGTCAGATTCTGCTGCTCCATCCCCTTCA
CCAAAACCAGCTCCTATTCCCCAAGTCCCACCACCGGCGTTTCCACCAGACCCGAAGAAC
TATTCGCCGATATTTTCACCACCGTTGCCAGGTCGTCCACCAGCAAAATCACCACTTCCA
CCAACCTCTCCAGCACCTGCTCCATCCCATACACCGCCGGTCCACTCTACACCACCCCCT
GTCCGATCTCCTCCACCACCGGTTTTCTCTCCACCACCACCAATCCCCGTCCGATCTCCT
CCACCACCAACCCCTGTCCGATCTCCTCCACCATCGGTTTCTTCTCCACCACCACCAGAA
CACTCCCCACCACCGCCGGTACAGTCCCCTCCACCACCCTTGTACTCACCATCTCCTCCA
GTTCATTCCCCACCACCACCACCAGTCCACTCTCCACCACCACCAGTCCGCTCCCCACCA
CCACCAGTCTCCTCTCCTCCACCACCACCGGTCTCTTCTCCCCCACCACCAGTCCACTCC
CCTCCTCCACCAGTCTCCTCTCCACCTCCACCAGTCTCTTCTCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNACATCGGATTTGAATACTCATCTCCGCCTCCACCAA
TGTTCCCAGGCTACTAAGTAG

Peptide Sequence

PEP ID

VIT_03s0063g01370.t01
PEP Infomation

pep chromosome:12X:3:4814966:4817439:-1 gene:VIT_03s0063g01370 transcript:VIT_03s0063g01370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQALGCFILLSFLFSSVSSFSLALSDAEASLIARRQLLSLPEDGDLPDDFEYEIDLVVTF
ANSRLRRAYIALQAWKNAMYSDPFNTTGNWVGANVCAYNGVFCAPALDDSNLSVVAGVDI
NHADIAGYLPAELGLMTDLALFHINSNRFCGIIPKSFSRLLLMHEFDISNNRFVGPFPTV
VLSLPALRYLDIRFNDFEGSLPEEVFEKELDALFVNDNRFTGSIPETLGQSTASVVVFAN
NKLTGCIPKSIGKMANTLNEIVFSNNDFGGCLPTEIGMLGNATVFAAGSNSFTGVLLKSF
SGLKKVEHLDVSHNTLTGFVPDGICKLPSLSNFTFSYNFFKGEAPSCQPPSRADITLDDT
SNCLSDRPKQKSARTCLPVVSRPVDCSKSKCGGKSSPPKPRPPVRSPTPPPASTPRSPPT
PKPQPHPSPSPSPPKPQPAPPKSTPPTPKPRPSPPKSVPSTPKPQPSPSPVSAPPTPTPT
PTPTPKPKPSPHPPKTSSPPPPHKATPPTPTPKPSPAPISSPPQPSHPSPPSDSAAPSPS
PKPAPIPQVPPPAFPPDPKNYSPIFSPPLPGRPPAKSPLPPTSPAPAPSHTPPVHSTPPP
VRSPPPPVFSPPPPIPVRSPPPPTPVRSPPPSVSSPPPPEHSPPPPVQSPPPPLYSPSPP
VHSPPPPPVHSPPPPVRSPPPPVSSPPPPPVSSPPPPVHSPPPPVSSPPPPVSSPXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLNTHLRLHQCSQATK

Transcript Sequence

Transcript ID

VIT_03s0063g01370.t01
Transcript Infomation

cdna chromosome:12X:3:4814966:4817439:-1 gene:VIT_03s0063g01370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGGCCTTAGGCTGCTTTATTCTTCTGTCTTTCCTTTTCTCTTCGGTCTCATCCTTC
TCTTTGGCTCTTTCTGATGCTGAGGCGTCCCTCATCGCCCGGCGTCAGCTCTTGTCTCTC
CCTGAAGATGGTGATCTCCCTGATGACTTTGAATATGAGATTGATCTTGTTGTAACCTTT
GCCAATTCTAGGCTCCGGAGAGCTTACATTGCTCTTCAGGCATGGAAAAATGCTATGTAC
TCTGACCCTTTTAACACAACTGGCAATTGGGTTGGTGCCAATGTGTGTGCCTATAATGGT
GTCTTCTGTGCTCCGGCTCTTGATGATTCCAACTTGAGTGTTGTTGCTGGTGTTGATATT
AACCATGCCGATATTGCTGGCTACCTTCCAGCTGAGCTGGGGCTTATGACTGATCTTGCG
CTCTTCCATATCAATTCAAACCGGTTTTGTGGAATCATTCCCAAGAGTTTCTCTAGGCTG
CTCCTTATGCATGAGTTTGACATCAGTAACAATCGGTTTGTTGGCCCCTTCCCCACAGTT
GTCCTATCGTTGCCAGCCCTCAGGTACCTCGACATCAGGTTTAATGACTTTGAAGGCAGT
CTGCCGGAAGAGGTCTTTGAGAAGGAACTTGATGCCTTGTTCGTGAATGATAACCGGTTC
ACAGGCTCCATCCCTGAAACTCTAGGCCAGTCAACAGCCTCGGTGGTTGTTTTCGCGAAC
AATAAACTCACTGGATGCATTCCAAAGAGCATTGGGAAGATGGCTAACACATTGAATGAG
ATCGTTTTCTCCAACAATGACTTTGGTGGCTGCTTGCCAACAGAGATCGGAATGCTGGGT
AATGCGACTGTGTTTGCTGCGGGTTCTAACTCCTTCACTGGGGTCCTGCTCAAGAGCTTT
TCAGGCCTAAAGAAGGTGGAGCATCTGGATGTTTCACACAATACACTAACTGGGTTTGTC
CCTGACGGAATCTGCAAGTTGCCTAGTTTGTCGAATTTTACGTTCTCTTACAATTTCTTC
AAGGGAGAGGCTCCATCGTGCCAGCCACCTTCGAGGGCGGACATAACATTGGATGACACA
AGCAATTGTTTGTCGGACAGGCCAAAGCAGAAGTCAGCCAGAACATGTTTACCAGTTGTG
AGTCGGCCGGTAGATTGTAGCAAGTCCAAGTGTGGAGGAAAATCTTCGCCCCCTAAACCA
AGGCCACCAGTCCGTAGTCCAACACCACCCCCGGCTTCCACCCCACGGTCCCCACCTACC
CCTAAACCACAACCCCATCCTTCTCCTTCCCCATCACCTCCTAAACCACAGCCTGCTCCT
CCTAAGTCCACCCCACCAACGCCTAAACCAAGGCCCAGTCCGCCCAAGTCGGTCCCATCG
ACACCCAAACCGCAGCCTAGTCCTTCGCCAGTCTCTGCGCCTCCAACACCAACGCCAACA
CCAACACCAACACCAAAGCCAAAACCATCTCCACACCCACCTAAAACTTCCAGCCCACCT
CCTCCTCATAAGGCCACCCCTCCAACCCCTACACCAAAGCCATCTCCAGCTCCGATTTCT
TCTCCCCCACAACCGTCTCATCCATCTCCCCCGTCAGATTCTGCTGCTCCATCCCCTTCA
CCAAAACCAGCTCCTATTCCCCAAGTCCCACCACCGGCGTTTCCACCAGACCCGAAGAAC
TATTCGCCGATATTTTCACCACCGTTGCCAGGTCGTCCACCAGCAAAATCACCACTTCCA
CCAACCTCTCCAGCACCTGCTCCATCCCATACACCGCCGGTCCACTCTACACCACCCCCT
GTCCGATCTCCTCCACCACCGGTTTTCTCTCCACCACCACCAATCCCCGTCCGATCTCCT
CCACCACCAACCCCTGTCCGATCTCCTCCACCATCGGTTTCTTCTCCACCACCACCAGAA
CACTCCCCACCACCGCCGGTACAGTCCCCTCCACCACCCTTGTACTCACCATCTCCTCCA
GTTCATTCCCCACCACCACCACCAGTCCACTCTCCACCACCACCAGTCCGCTCCCCACCA
CCACCAGTCTCCTCTCCTCCACCACCACCGGTCTCTTCTCCCCCACCACCAGTCCACTCC
CCTCCTCCACCAGTCTCCTCTCCACCTCCACCAGTCTCTTCTCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNACATCGGATTTGAATACTCATCTCCGCCTCCACCAA
TGTTCCCAGGCTACTAAGTAGTATATCTTAACATCTCTCCCATTTTGTCATTCTCATTTC
TAGTTTCACAATGCCAAATACACACTTTGTTAGCTGAGCTTCTCAACAAATGAACTGTAA
TATTTTCCATTTCTCTTTACACTGTAAAGCAACAAAAGAAACATCATTGCACGCAGAGAA
ATTCCTTCTTGTAA