Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g01180.t01
CDS Infomation

cds chromosome:12X:3:4670166:4676644:-1 gene:VIT_03s0063g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGAGGTCGATCCAGCCTTCATCCAAGACACCCAACATAGGCCTAAGCTCGCTGTT
ATCGAAGCTGAAGGCATCCCCCTTGTTGGGACGTGCAGCACAGATGGTACCAGGAGGGCA
ACCTTATCGTCCTTAAGTCTTGGACTTGGGTTTGAATCCTGGGGAGGCCACTCTGTGACG
CCCTTGACTGGCACAGAGCCAAATATACTCAAAACAAATGACGTCCCAACACCCCTCATT
GATCTCTCTTCCGCCAATGCTTCCAACCATGTTTCTCAAATAGCTGATGCATCCAAGAAT
TGGGGCTTCTTTCAAGTAATCAACCATGGGGTGCCCTCGGAGTCTCGCCGGAAAATTGAG
GATGCGGCTAGAAAATTCTTCGCTCTGCCATTGGAGGAGAAGAGGAAGGTGAGTAGAGAT
GAGGTGAATCCTTTGGGGTATTTTGATTCCGAGCTTACCAAGAACGTTAGGGACTGGAAG
GAAGTCTTTGATTTCGTGGTATCAACCCCCACCGTGATCCCTGTTTCGCCTGATCCTGAC
GACAAGGAGCTCAAAGAGCTGACCAATCAGTGGCCTCAGTACCCTCCTGAATTAAGGGAG
GTATGTGAAGAGTATGCTAGAGAAATGGAAAAATTAGCTTTCAAGCTGTTGGGACTCATC
TCGTTGAGTTTAGGTTTGCCAGAAAACAGATTCAATCTTTTCTTTGAAGAATCAACGAAC
TTCATCCGCCTCAATCACTACCCACCTTGCCCCATCCCTCACCTAGCTCTGGGCGTTGGT
CGCCACAAGGATGGCGGAGCCTTAACCATCCTTGCTCAGGATGATGTCGGAGGGTTGGAA
GTAAAGCGAAAAACCGATGGAGAATGGATTCGAGTTAAGCCCACCCCAGATGCTTATATC
ATCAATGTTGGGGATATAATTCAGGTCTGGAGCAATGATACTTATGAAAGTGTGGAGCAC
AGGGTGATGGTGAATTCAGAGAGGGAAAGGTTTTCGATTCCGGTCTTTTTCAATCCCGGG
CAGCATGTTTGGGTGAAGCCCTTGGAGGAGCTGACGAAAGGGGAAAAGCAAAATTACAGA
GCATACAACTGGGGAAAGTTCTTTGCTAGGAGAAAGCGCAATAATTTCAAGAAGCTTGAT
GTGGAAAACATCCAAATTTCTCATTTCAAGGCATCAGAGTAA

Peptide Sequence

PEP ID

VIT_03s0063g01180.t01
PEP Infomation

pep chromosome:12X:3:4670166:4676644:-1 gene:VIT_03s0063g01180 transcript:VIT_03s0063g01180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGEVDPAFIQDTQHRPKLAVIEAEGIPLVGTCSTDGTRRATLSSLSLGLGFESWGGHSVT
PLTGTEPNILKTNDVPTPLIDLSSANASNHVSQIADASKNWGFFQVINHGVPSESRRKIE
DAARKFFALPLEEKRKVSRDEVNPLGYFDSELTKNVRDWKEVFDFVVSTPTVIPVSPDPD
DKELKELTNQWPQYPPELREVCEEYAREMEKLAFKLLGLISLSLGLPENRFNLFFEESTN
FIRLNHYPPCPIPHLALGVGRHKDGGALTILAQDDVGGLEVKRKTDGEWIRVKPTPDAYI
INVGDIIQVWSNDTYESVEHRVMVNSERERFSIPVFFNPGQHVWVKPLEELTKGEKQNYR
AYNWGKFFARRKRNNFKKLDVENIQISHFKASE

Transcript Sequence

Transcript ID

VIT_03s0063g01180.t01
Transcript Infomation

cdna chromosome:12X:3:4670166:4676644:-1 gene:VIT_03s0063g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCACCTGCAGCCACAGCCACAGCCATGGGAGAGGTCGATCCAGCCTTCATCCAAGACAC
CCAACATAGGCCTAAGCTCGCTGTTATCGAAGCTGAAGGCATCCCCCTTGTTGGGACGTG
CAGCACAGATGGTACCAGGAGGGCAACCTTATCGTCCTTAAGTCTTGGACTTGGGTTTGA
ATCCTGGGGAGGCCACTCTGTGACGCCCTTGACTGGCACAGAGCCAAATATACTCAAAAC
AAATGACGTCCCAACACCCCTCATTGATCTCTCTTCCGCCAATGCTTCCAACCATGTTTC
TCAAATAGCTGATGCATCCAAGAATTGGGGCTTCTTTCAAGTAATCAACCATGGGGTGCC
CTCGGAGTCTCGCCGGAAAATTGAGGATGCGGCTAGAAAATTCTTCGCTCTGCCATTGGA
GGAGAAGAGGAAGGTGAGTAGAGATGAGGTGAATCCTTTGGGGTATTTTGATTCCGAGCT
TACCAAGAACGTTAGGGACTGGAAGGAAGTCTTTGATTTCGTGGTATCAACCCCCACCGT
GATCCCTGTTTCGCCTGATCCTGACGACAAGGAGCTCAAAGAGCTGACCAATCAGTGGCC
TCAGTACCCTCCTGAATTAAGGGAGGTATGTGAAGAGTATGCTAGAGAAATGGAAAAATT
AGCTTTCAAGCTGTTGGGACTCATCTCGTTGAGTTTAGGTTTGCCAGAAAACAGATTCAA
TCTTTTCTTTGAAGAATCAACGAACTTCATCCGCCTCAATCACTACCCACCTTGCCCCAT
CCCTCACCTAGCTCTGGGCGTTGGTCGCCACAAGGATGGCGGAGCCTTAACCATCCTTGC
TCAGGATGATGTCGGAGGGTTGGAAGTAAAGCGAAAAACCGATGGAGAATGGATTCGAGT
TAAGCCCACCCCAGATGCTTATATCATCAATGTTGGGGATATAATTCAGGTCTGGAGCAA
TGATACTTATGAAAGTGTGGAGCACAGGGTGATGGTGAATTCAGAGAGGGAAAGGTTTTC
GATTCCGGTCTTTTTCAATCCCGGGCAGCATGTTTGGGTGAAGCCCTTGGAGGAGCTGAC
GAAAGGGGAAAAGCAAAATTACAGAGCATACAACTGGGGAAAGTTCTTTGCTAGGAGAAA
GCGCAATAATTTCAAGAAGCTTGATGTGGAAAACATCCAAATTTCTCATTTCAAGGCATC
AGAGTAAAAGAGTCAGTAGGACATTATCTATCTTTAATCAAGAAGAGCTTGTTTTAGCTC
TTTGTAGTTCACCATGC