Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g00380.t01
CDS Infomation

cds chromosome:12X:3:3944527:3947231:1 gene:VIT_03s0063g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTGGCCTTATATTGGAGAGACTCTCCAACTCTACTCCCAAGACCCCACTGTCTTC
TTTGATTCAAAACAGGAAAGATATGGAGAAATATTCAAAACCCACATACTTGGGTGTCCT
TGTGTCATGCTGTCTAGCCCTGAGGCTGCTCGGTTTGTGCTGGTGACTCGGGCTCATTTG
TTCAAGCCTACGTACCCCAAGAGTAAAGAGAAGATGATTGGCCCTTCTGCGCTGTTTTTT
CACCAAGGAGACTACCATGCTCAGCTGAGGAAGCTGGTTCAGAGCTCACTATCTCCAGAT
TCTATTCGGAAACTAGTCCCCAGTATTGAAGCCTTGGCTATTTCTGCTTTGGAGTCATGG
GCCGGCGGGCAGGTCATTAACACCTTTCATGCCATGAAGAAGTTATCTTTTGATGTTGGC
ATTCTTTCTGTTTTTGGTCACTTGGAGGGTAATTACAGAGACGAGCTTACCAAGAACTAC
TGCATAGTAGACAAAGGTTACAATTCCTTTCCCACAAATATACCAGGAACGGCATACAGC
AAAGCAATCCTGGCAAGGAAAAGGCTTAATCAGATTGTGAGAGAGATCATTTGTGAGAGG
AAGGAGAAGAGACTGGTGGAAAAGGATCTGTTGGGCCATCTACTGAACTTCAAAGATGAA
AAGGGGCAAATTTTAACTGAGGATCAAATCGCCGACAACATCATTGGCGTACTGTTTGCT
GCTCAGGACACAACGGCTAGTGTCTTAACTTGGGTCCTCAAATATCTCCATGATGATCAG
AAACTTCTAGAATCTGTAAAGGCTGAGCAGAAAGCAATATTTGAATCAAACAGTGGAGGA
AATCGGCCTTTGACATGGGATCAGACTAGAAACATGCCACTTACTTATAGAGTCATATTA
GAGAGCTTGAGAATGGCAAGCATCATATCTTTCACCTTTAGGGAAGCCGTAGTTGATGTA
GAGTACAAGGGATATCTCATTCCAAAAGGTTGGAAGGTGATGCCACTGTTCAGGAACATT
CATCACAATCCGGAATTCTTCTCTGATCCTCAGAATTTCGATCCATCTAGGTTTGAGGTT
GCTCCGAAACCGAATAGTTTTTTGCCATTTGGTAGTGGAGTCCATGCTTGTCCTGGAAAT
GAGCTTGCCAAGCTTGAGATCCTTATTTTGACTCATCATCTAGTTACCAAGTTCAGGTGG
GAAGTGGTGGGATCACAAGGTGGAATTGAGTATGGACCATTCCCTGTTCCTCAGCGTGGA
CTCCCAGCCAGGTTTTGGAAACTGGAAAGCAAGAAGAGTGCCCCTTAA

Peptide Sequence

PEP ID

VIT_03s0063g00380.t01
PEP Infomation

pep chromosome:12X:3:3944527:3947231:1 gene:VIT_03s0063g00380 transcript:VIT_03s0063g00380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGWPYIGETLQLYSQDPTVFFDSKQERYGEIFKTHILGCPCVMLSSPEAARFVLVTRAHL
FKPTYPKSKEKMIGPSALFFHQGDYHAQLRKLVQSSLSPDSIRKLVPSIEALAISALESW
AGGQVINTFHAMKKLSFDVGILSVFGHLEGNYRDELTKNYCIVDKGYNSFPTNIPGTAYS
KAILARKRLNQIVREIICERKEKRLVEKDLLGHLLNFKDEKGQILTEDQIADNIIGVLFA
AQDTTASVLTWVLKYLHDDQKLLESVKAEQKAIFESNSGGNRPLTWDQTRNMPLTYRVIL
ESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPEFFSDPQNFDPSRFEV
APKPNSFLPFGSGVHACPGNELAKLEILILTHHLVTKFRWEVVGSQGGIEYGPFPVPQRG
LPARFWKLESKKSAP

Transcript Sequence

Transcript ID

VIT_03s0063g00380.t01
Transcript Infomation

cdna chromosome:12X:3:3944527:3947231:1 gene:VIT_03s0063g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCTCAAGAGAGAGAGAGAGAGAAAGGGAGAGAGTTGCTGCATTTGTATGGAGATTCTTT
CTATTTTCTGTTACATCTTGCTCTTTCTCTCTACTCTTCTTTCTTATCCCTTCTTATTTT
TAAAGAAACAAAAGAAGAAAGTATCAAAGCAAAGAGTTTATAAGCTTCCCCCAGGCTCAA
TGGGGTGGCCTTATATTGGAGAGACTCTCCAACTCTACTCCCAAGACCCCACTGTCTTCT
TTGATTCAAAACAGGAAAGATATGGAGAAATATTCAAAACCCACATACTTGGGTGTCCTT
GTGTCATGCTGTCTAGCCCTGAGGCTGCTCGGTTTGTGCTGGTGACTCGGGCTCATTTGT
TCAAGCCTACGTACCCCAAGAGTAAAGAGAAGATGATTGGCCCTTCTGCGCTGTTTTTTC
ACCAAGGAGACTACCATGCTCAGCTGAGGAAGCTGGTTCAGAGCTCACTATCTCCAGATT
CTATTCGGAAACTAGTCCCCAGTATTGAAGCCTTGGCTATTTCTGCTTTGGAGTCATGGG
CCGGCGGGCAGGTCATTAACACCTTTCATGCCATGAAGAAGTTATCTTTTGATGTTGGCA
TTCTTTCTGTTTTTGGTCACTTGGAGGGTAATTACAGAGACGAGCTTACCAAGAACTACT
GCATAGTAGACAAAGGTTACAATTCCTTTCCCACAAATATACCAGGAACGGCATACAGCA
AAGCAATCCTGGCAAGGAAAAGGCTTAATCAGATTGTGAGAGAGATCATTTGTGAGAGGA
AGGAGAAGAGACTGGTGGAAAAGGATCTGTTGGGCCATCTACTGAACTTCAAAGATGAAA
AGGGGCAAATTTTAACTGAGGATCAAATCGCCGACAACATCATTGGCGTACTGTTTGCTG
CTCAGGACACAACGGCTAGTGTCTTAACTTGGGTCCTCAAATATCTCCATGATGATCAGA
AACTTCTAGAATCTGTAAAGGCTGAGCAGAAAGCAATATTTGAATCAAACAGTGGAGGAA
ATCGGCCTTTGACATGGGATCAGACTAGAAACATGCCACTTACTTATAGAGTCATATTAG
AGAGCTTGAGAATGGCAAGCATCATATCTTTCACCTTTAGGGAAGCCGTAGTTGATGTAG
AGTACAAGGGATATCTCATTCCAAAAGGTTGGAAGGTGATGCCACTGTTCAGGAACATTC
ATCACAATCCGGAATTCTTCTCTGATCCTCAGAATTTCGATCCATCTAGGTTTGAGGTTG
CTCCGAAACCGAATAGTTTTTTGCCATTTGGTAGTGGAGTCCATGCTTGTCCTGGAAATG
AGCTTGCCAAGCTTGAGATCCTTATTTTGACTCATCATCTAGTTACCAAGTTCAGGTGGG
AAGTGGTGGGATCACAAGGTGGAATTGAGTATGGACCATTCCCTGTTCCTCAGCGTGGAC
TCCCAGCCAGGTTTTGGAAACTGGAAAGCAAGAAGAGTGCCCCTTAATTCTAGATGACTT
CTCCCACTATTGTATTAATTAGTCTCCAAACCAACCCTTCTTTTTTGGGGTTGGTTCCTA
TCTCATGTAATTTTTGGGCTTTCCCGTCTCTAAATGTAATTTGACCATATATTAACAGAT
GAGTACTACGGGGGGGAATTTTTTCCAGCCCTTAAAA