Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g00270.t01
CDS Infomation

cds chromosome:12X:3:3854994:3856810:-1 gene:VIT_03s0063g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGATCCAAATACATCAGCTTTGATAGTATCTTCAGAATCCTCTGAACAAAGTGGA
ACACATATGATGAATCCAAGTGCGAATCCTCTTCAACCTCTTCTAAATCAGCAAGGTCGA
ACCTCCCCACATGGTTCTGTGGCTATCCTTTGGGACATTGAGAATTGCCCTGTCCCAAGT
GATGTGCGGCCTGAAGATGTAGCTGGCAATATCCGAATGGCACTGCGTGTCCATCCTGTA
ATTAGAGGTGCTGTAACCATGTTTTCTGCATATGGGGATTTTAATGCCTTTCCCAGGCGG
CTCAGAGAGGGCTGCCAGAGAACAGGAGTCAAACTCATAGATGTTCCAAATGGGAGGAAG
GATGCAGCTGACAAAGCTATCTTAGTTGACATGTTCCTGTTTGCCCTTGACAATCCTCCA
CCTTCTTCCATCATGCTGATATCTGGGGATGTTGATTTTGCTCCTGCACTTCACATACTT
GGTCAACGTGGATATACTGTCATTCTAGTAATTCCTTCTGGAGTGGGTGTGGCATCTGCC
CTGTGCAATGCTGGAAGGTTTGTTTGGGACTGGCCTAGTGTGGCTCGTGGGGAAGGCTTT
GTGCCTCCCACCAAGGTTTTGATCCCCCCTCGTGGAGGAACAGCTGATATTGCTGGGTGT
CTCATGGGTTGCCATATCAATGACAATCCAGATGGACAAAATGAAGAAGAGGCAATTGTA
TATAGGGGAATGTCACAAGGTTATTATAGCACAAGGGATTTCTCAATAATATCACAATCC
TTATCTGAATTCAACAGTACTTCTTCAATCACCATGTCTTGTTTTCCTCCGACTTTGAGG
TCACAAAGCCTCCCATCTGGTTTGAATGAAGCTTCAGCAGGACCTATTTCTTATGGTGAA
CAAAATGAATCCACCTTGTGGGTGCAGCCTGGGGACCTAAATGGACTAAAGGCACAGCTG
GTAAAACTGCTTGAACTATCAGGAGGGTGCCTGCCTCTTGCCCGCATTCCTTCTGACTAC
CAGAAACTCTTTGGACGGCCTCTTTATGTTTCAGAATATGGAGCTTTCAAGCTTGTGAAT
CTTTTCAAGAAGATGGCTGATACATTGGCCGTAGAGGGGAAGGGCCATAGGAAGCTTGTC
TACCTCCGAAACTCGAAGGCTGGCCCAAGTGCTCCTCCATTGATAATGGCAAGGAAGGAG
AAGAAAGGGAAGGGGATCCAGGAGGAGAACATGGATAATATCACTGGCTGTGGGTCTTCA
GATGAGTTCTCAGATGATGAAAGAGTGGTTGTAGAAGAACATGATGAGAGAAGGAGAGAA
GAAAAGTTTGGTCTGTTGGCTTCTAGATGTGAAATCAATGATCAAAATATTGAACAGTTC
AAACATGAGTTGCAAGAGATCCTAGTGAGCTATTCTTGTCGGATTTTCCTGGGTTGTTTT
GAGGCAATATACCAACAAAGGTACAAGAAACCACTGGACTATCGAAAGTTTGGTGTGAAT
GAGTTAGAGGGGTTGTTTGACAAGGTGAAGGATGTTGTCGTGTTGCATGAGGAACCAGTA
ACCAAGAGGAAGTTCCTTGATGCAGTTGGTGGCTAG

Peptide Sequence

PEP ID

VIT_03s0063g00270.t01
PEP Infomation

pep chromosome:12X:3:3854994:3856810:-1 gene:VIT_03s0063g00270 transcript:VIT_03s0063g00270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADPNTSALIVSSESSEQSGTHMMNPSANPLQPLLNQQGRTSPHGSVAILWDIENCPVPS
DVRPEDVAGNIRMALRVHPVIRGAVTMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRK
DAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPSGVGVASA
LCNAGRFVWDWPSVARGEGFVPPTKVLIPPRGGTADIAGCLMGCHINDNPDGQNEEEAIV
YRGMSQGYYSTRDFSIISQSLSEFNSTSSITMSCFPPTLRSQSLPSGLNEASAGPISYGE
QNESTLWVQPGDLNGLKAQLVKLLELSGGCLPLARIPSDYQKLFGRPLYVSEYGAFKLVN
LFKKMADTLAVEGKGHRKLVYLRNSKAGPSAPPLIMARKEKKGKGIQEENMDNITGCGSS
DEFSDDERVVVEEHDERRREEKFGLLASRCEINDQNIEQFKHELQEILVSYSCRIFLGCF
EAIYQQRYKKPLDYRKFGVNELEGLFDKVKDVVVLHEEPVTKRKFLDAVGG

Transcript Sequence

Transcript ID

VIT_03s0063g00270.t01
Transcript Infomation

cdna chromosome:12X:3:3854994:3856810:-1 gene:VIT_03s0063g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAAGCACTAATGGCTGATCCAAATACATCAGCTTTGATAGTATCTTCAGAATCCTCTGA
ACAAAGTGGAACACATATGATGAATCCAAGTGCGAATCCTCTTCAACCTCTTCTAAATCA
GCAAGGTCGAACCTCCCCACATGGTTCTGTGGCTATCCTTTGGGACATTGAGAATTGCCC
TGTCCCAAGTGATGTGCGGCCTGAAGATGTAGCTGGCAATATCCGAATGGCACTGCGTGT
CCATCCTGTAATTAGAGGTGCTGTAACCATGTTTTCTGCATATGGGGATTTTAATGCCTT
TCCCAGGCGGCTCAGAGAGGGCTGCCAGAGAACAGGAGTCAAACTCATAGATGTTCCAAA
TGGGAGGAAGGATGCAGCTGACAAAGCTATCTTAGTTGACATGTTCCTGTTTGCCCTTGA
CAATCCTCCACCTTCTTCCATCATGCTGATATCTGGGGATGTTGATTTTGCTCCTGCACT
TCACATACTTGGTCAACGTGGATATACTGTCATTCTAGTAATTCCTTCTGGAGTGGGTGT
GGCATCTGCCCTGTGCAATGCTGGAAGGTTTGTTTGGGACTGGCCTAGTGTGGCTCGTGG
GGAAGGCTTTGTGCCTCCCACCAAGGTTTTGATCCCCCCTCGTGGAGGAACAGCTGATAT
TGCTGGGTGTCTCATGGGTTGCCATATCAATGACAATCCAGATGGACAAAATGAAGAAGA
GGCAATTGTATATAGGGGAATGTCACAAGGTTATTATAGCACAAGGGATTTCTCAATAAT
ATCACAATCCTTATCTGAATTCAACAGTACTTCTTCAATCACCATGTCTTGTTTTCCTCC
GACTTTGAGGTCACAAAGCCTCCCATCTGGTTTGAATGAAGCTTCAGCAGGACCTATTTC
TTATGGTGAACAAAATGAATCCACCTTGTGGGTGCAGCCTGGGGACCTAAATGGACTAAA
GGCACAGCTGGTAAAACTGCTTGAACTATCAGGAGGGTGCCTGCCTCTTGCCCGCATTCC
TTCTGACTACCAGAAACTCTTTGGACGGCCTCTTTATGTTTCAGAATATGGAGCTTTCAA
GCTTGTGAATCTTTTCAAGAAGATGGCTGATACATTGGCCGTAGAGGGGAAGGGCCATAG
GAAGCTTGTCTACCTCCGAAACTCGAAGGCTGGCCCAAGTGCTCCTCCATTGATAATGGC
AAGGAAGGAGAAGAAAGGGAAGGGGATCCAGGAGGAGAACATGGATAATATCACTGGCTG
TGGGTCTTCAGATGAGTTCTCAGATGATGAAAGAGTGGTTGTAGAAGAACATGATGAGAG
AAGGAGAGAAGAAAAGTTTGGTCTGTTGGCTTCTAGATGTGAAATCAATGATCAAAATAT
TGAACAGTTCAAACATGAGTTGCAAGAGATCCTAGTGAGCTATTCTTGTCGGATTTTCCT
GGGTTGTTTTGAGGCAATATACCAACAAAGGTACAAGAAACCACTGGACTATCGAAAGTT
TGGTGTGAATGAGTTAGAGGGGTTGTTTGACAAGGTGAAGGATGTTGTCGTGTTGCATGA
GGAACCAGTAACCAAGAGGAAGTTCCTTGATGCAGTTGGTGGCTAGAAGATCTGTTGGCT
GCCGATTCTTGTAACTTGCCATGTTCTAACTTGTTTTGGATCACAGTTGAGGCATGCTTA
TTATTGCCTACCTCTTTTTTTTTTTCCCTTCATTTATATAATAGGTGATAGGATGGGCTA
GGGGCATGTTGGCTTTTCCTTTTTACCTTTTCCTCCTACATGGGTTTGTAGTTCATTTTC
AGAACTTCCATGTTGGA