Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0063g00160.t01
CDS Infomation

cds chromosome:12X:3:3768331:3782384:1 gene:VIT_03s0063g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAGGGCAAAGAAGTACCATTGGTTCCTTCTCTGAGACCATTGATTTTGGGCAGGGC
TCTGTTTCCAATAACACTGGCATGAATCAGCAGACTTCGTGGAATAACATGCTAAATCCC
GTTGATAGCCGGTTGTCAAACTATATGTTACCTTCCAATGAGGCAAATTTTACATGTGTA
AATGCTGTCAATCATGATGTTCAAAACTTTAATGGCTGGCATTTGGGTGAATCTAGCTCT
AGTATGAATCCACGAAACCAGGCGATTAATGCTGGTGTAAGAATGGAACACGGTAGGTCT
TCATCTGGTACTCTTGCAGGGGCTGATCCTAATTTGGAAGACAGGCGACTTGATCTGGCT
AATAGCCCTCTTCATGAGAGTGCCACTAGTGGCAATCAGATTACAAGGGGGCCTTTATTT
ATTCGGGGTTCCAGTTCTACTCGTATCCCTCTGAATGTAAATCTAAATGCTGAAATTGTG
GGTAATTCTGGTAGTGGTGGGCAGGAAATGGGAGCAGGCCTGTGCAAGTCAGGTGGATTA
GGAACAGAGCAGGTTTCACCTGTTAGTGCTTCTGCTGATAATATAGGGGCCTCTTCTGGA
AGTTCTGGTTCTTTGATTGAGGAAAGCAATGGTGGATCAGGTTCTTCTTTGGGCAGTTGG
GGCTTATCCTGCAAGAGAAAGGCTCTTGAAGGTACTTCTGGACAGTCTTATCCTAGTGGA
AGTTCAAGCTGTTCTCCACAAGCTGAACCCAGTGCTTGGCTTGCTGTTCCTGCTCATTCT
AATGCTTCTAACAGCTCAAGCATATCCACACCCTCAGGGAATTCTCTCAGTGTGAATCCT
CCAGGGCTGCCAAACCAACAGTCTGGGATTGGCATGAGAGGTGTAGCTCCTTCTGATGTT
TTTCCTTCTTTAAGTGTTACAGGAAATGCAGAAAACTCCCAGAGAAACTTTGGCAGGAGA
GTAAATCCGGGACATCAACAGGAACCTGTGGCATTTAATTTATCATCAGCAGGAATTACT
AGGCGTTCTAATGTTAGTTCCAATCATCAATCATCTAGGCCTCTGACATTTAGTGATTCT
TTGGACTTGAGGCCAAGTGCAGCGGTAGCAGCCAATGCAAATGCACCCCAGATTGCTCCC
CAGAGCCAGTCTCATGTACTACATATTCCTGGCTTGGCAAGAAATATGCATCCTTTTCCT
TGGAGTGGGGCTTCCAATTCAAGAGCTGGCAGTTCATCACGTTCATTTAACTTTTCTAGG
GAGAGAGCTGCTGTGTTACAAGAGGAAGCAAACCTAAGAAGCAACCACAGAAACAATGCA
GAGCATCCCATGTTTATTCCTGCAACTGAGACTAGAAATTTGGCACAGGATCCAACACAT
TGGAGTTTGGCCACAGGAAATATTAGCACTAATGGAGGTGGTCCTTCAACTTCTCGAATG
GGCCTGAGTTCAAGTGTTCATTCGTTGCCTACTGCTTGGATTCCTGTTCACAATCCCCCA
ACATCAAATCAGCAAAGATTATCAGAAATTGCTCCTTGGACTTTATTCCCATCTATTGAG
TCTGAAGCTGGAGGTCTCAGTGGTCCTTTTTCATCATTGCCTTCTGGTCCTTCCGCTAAC
ACACGGGAGACAGTTATATCAGCTGGAGCTATTAGCCAAGTCCATCAGCAAACATATCCA
AGGTCTGCATTCTTGATGGAGAGGCAAGGAAATGATGTTCTTGGTATGCCCCATTCATTG
CGTGCTTTAGCAGCTGACATAGAAGGGAGACACAGGCTAATATCTGAGATTCGTCAGGTT
TTGACTGCCATGCGTAGGGGTGAGAGCTTGCGGGCTGAGGATTATATGCTCTTTGACCCG
TTCATATATCATGGGATGTCCGAATTGCAGGATAGGCACAGAGATATGCGGCTTGATGTC
GATAATATGTCATATGAGGAACTACTGGATTTAGAAGAACGCATAGGAGACGTGAACACT
GGATTGAGTGATGAAAAAATACTGAAGTGTATGAAAAGGCAAAAATATTCATCCAATCCA
ACACCTGAGGTGGAGCCATGTTGTATTTGCCAGGAAGAATATGCTGTTGGAGATGACCTT
GGGATACTGGATTGTGGACATGACTTCCATACCAACTGCATCAAACAATGGTTAATGCAG
AAGAATCTGTGCCCCATTTGTAAAACAACAGGCTTGGCTACATGA

Peptide Sequence

PEP ID

VIT_03s0063g00160.t01
PEP Infomation

pep chromosome:12X:3:3768331:3782384:1 gene:VIT_03s0063g00160 transcript:VIT_03s0063g00160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQGQRSTIGSFSETIDFGQGSVSNNTGMNQQTSWNNMLNPVDSRLSNYMLPSNEANFTCV
NAVNHDVQNFNGWHLGESSSSMNPRNQAINAGVRMEHGRSSSGTLAGADPNLEDRRLDLA
NSPLHESATSGNQITRGPLFIRGSSSTRIPLNVNLNAEIVGNSGSGGQEMGAGLCKSGGL
GTEQVSPVSASADNIGASSGSSGSLIEESNGGSGSSLGSWGLSCKRKALEGTSGQSYPSG
SSSCSPQAEPSAWLAVPAHSNASNSSSISTPSGNSLSVNPPGLPNQQSGIGMRGVAPSDV
FPSLSVTGNAENSQRNFGRRVNPGHQQEPVAFNLSSAGITRRSNVSSNHQSSRPLTFSDS
LDLRPSAAVAANANAPQIAPQSQSHVLHIPGLARNMHPFPWSGASNSRAGSSSRSFNFSR
ERAAVLQEEANLRSNHRNNAEHPMFIPATETRNLAQDPTHWSLATGNISTNGGGPSTSRM
GLSSSVHSLPTAWIPVHNPPTSNQQRLSEIAPWTLFPSIESEAGGLSGPFSSLPSGPSAN
TRETVISAGAISQVHQQTYPRSAFLMERQGNDVLGMPHSLRALAADIEGRHRLISEIRQV
LTAMRRGESLRAEDYMLFDPFIYHGMSELQDRHRDMRLDVDNMSYEELLDLEERIGDVNT
GLSDEKILKCMKRQKYSSNPTPEVEPCCICQEEYAVGDDLGILDCGHDFHTNCIKQWLMQ
KNLCPICKTTGLAT

Transcript Sequence

Transcript ID

VIT_03s0063g00160.t01
Transcript Infomation

cdna chromosome:12X:3:3768331:3782384:1 gene:VIT_03s0063g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTTAGTTGTTAAAGTGAATGAATTGGGAGCCATCCAAGTGTTATGGTCTTATAGAATT
TGATCGTTGCTTGCAGGTGGGAGATACACGTTTCAAGAACCTTTTTTTTTCAACTTTTCT
TACCCTTCTTTCATTTTTTTTTAATTCTTTTTTCATCATAATTCTGTTCATTGTTAATGT
ATTTATTGTTCCTATGATATTCACTCCAGTTTTGCTCCTTGCGGGTCATGTAATTGTAGA
GTGAATTAACATTTTGAATGTAGATTATTACTGATGTTATCATATCATCACAGTCATTAT
ATCTTAATATCTTGTGACTGTGCACGTCCTTCCCAGGTGTATTCTTAGCAGCACACTGTT
TGTGTTGGAATAATATTTTGTACTTTCAAACTTTTTGGGGGAAATTCATCTGGTCTGATG
CAAGGGCAAAGAAGTACCATTGGTTCCTTCTCTGAGACCATTGATTTTGGGCAGGGCTCT
GTTTCCAATAACACTGGCATGAATCAGCAGACTTCGTGGAATAACATGCTAAATCCCGTT
GATAGCCGGTTGTCAAACTATATGTTACCTTCCAATGAGGCAAATTTTACATGTGTAAAT
GCTGTCAATCATGATGTTCAAAACTTTAATGGCTGGCATTTGGGTGAATCTAGCTCTAGT
ATGAATCCACGAAACCAGGCGATTAATGCTGGTGTAAGAATGGAACACGGTAGGTCTTCA
TCTGGTACTCTTGCAGGGGCTGATCCTAATTTGGAAGACAGGCGACTTGATCTGGCTAAT
AGCCCTCTTCATGAGAGTGCCACTAGTGGCAATCAGATTACAAGGGGGCCTTTATTTATT
CGGGGTTCCAGTTCTACTCGTATCCCTCTGAATGTAAATCTAAATGCTGAAATTGTGGGT
AATTCTGGTAGTGGTGGGCAGGAAATGGGAGCAGGCCTGTGCAAGTCAGGTGGATTAGGA
ACAGAGCAGGTTTCACCTGTTAGTGCTTCTGCTGATAATATAGGGGCCTCTTCTGGAAGT
TCTGGTTCTTTGATTGAGGAAAGCAATGGTGGATCAGGTTCTTCTTTGGGCAGTTGGGGC
TTATCCTGCAAGAGAAAGGCTCTTGAAGGTACTTCTGGACAGTCTTATCCTAGTGGAAGT
TCAAGCTGTTCTCCACAAGCTGAACCCAGTGCTTGGCTTGCTGTTCCTGCTCATTCTAAT
GCTTCTAACAGCTCAAGCATATCCACACCCTCAGGGAATTCTCTCAGTGTGAATCCTCCA
GGGCTGCCAAACCAACAGTCTGGGATTGGCATGAGAGGTGTAGCTCCTTCTGATGTTTTT
CCTTCTTTAAGTGTTACAGGAAATGCAGAAAACTCCCAGAGAAACTTTGGCAGGAGAGTA
AATCCGGGACATCAACAGGAACCTGTGGCATTTAATTTATCATCAGCAGGAATTACTAGG
CGTTCTAATGTTAGTTCCAATCATCAATCATCTAGGCCTCTGACATTTAGTGATTCTTTG
GACTTGAGGCCAAGTGCAGCGGTAGCAGCCAATGCAAATGCACCCCAGATTGCTCCCCAG
AGCCAGTCTCATGTACTACATATTCCTGGCTTGGCAAGAAATATGCATCCTTTTCCTTGG
AGTGGGGCTTCCAATTCAAGAGCTGGCAGTTCATCACGTTCATTTAACTTTTCTAGGGAG
AGAGCTGCTGTGTTACAAGAGGAAGCAAACCTAAGAAGCAACCACAGAAACAATGCAGAG
CATCCCATGTTTATTCCTGCAACTGAGACTAGAAATTTGGCACAGGATCCAACACATTGG
AGTTTGGCCACAGGAAATATTAGCACTAATGGAGGTGGTCCTTCAACTTCTCGAATGGGC
CTGAGTTCAAGTGTTCATTCGTTGCCTACTGCTTGGATTCCTGTTCACAATCCCCCAACA
TCAAATCAGCAAAGATTATCAGAAATTGCTCCTTGGACTTTATTCCCATCTATTGAGTCT
GAAGCTGGAGGTCTCAGTGGTCCTTTTTCATCATTGCCTTCTGGTCCTTCCGCTAACACA
CGGGAGACAGTTATATCAGCTGGAGCTATTAGCCAAGTCCATCAGCAAACATATCCAAGG
TCTGCATTCTTGATGGAGAGGCAAGGAAATGATGTTCTTGGTATGCCCCATTCATTGCGT
GCTTTAGCAGCTGACATAGAAGGGAGACACAGGCTAATATCTGAGATTCGTCAGGTTTTG
ACTGCCATGCGTAGGGGTGAGAGCTTGCGGGCTGAGGATTATATGCTCTTTGACCCGTTC
ATATATCATGGGATGTCCGAATTGCAGGATAGGCACAGAGATATGCGGCTTGATGTCGAT
AATATGTCATATGAGGAACTACTGGATTTAGAAGAACGCATAGGAGACGTGAACACTGGA
TTGAGTGATGAAAAAATACTGAAGTGTATGAAAAGGCAAAAATATTCATCCAATCCAACA
CCTGAGGTGGAGCCATGTTGTATTTGCCAGGAAGAATATGCTGTTGGAGATGACCTTGGG
ATACTGGATTGTGGACATGACTTCCATACCAACTGCATCAAACAATGGTTAATGCAGAAG
AATCTGTGCCCCATTTGTAAAACAACAGGCTTGGCTACATGAGAAGGGATCACCATCATA
TGCAGAATCTCAAAACTTTACTTTCTTGCTTATGGATCATTAAATCCGACATTTGGTGGA
TTATATCTTCTTTAATCTCTCTTCTGTCTGAAACCGGTTTTTGCTTGCTCATTACCTGCA
TAATCTCAT