Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_03s0038g04610.t01
CDS Infomation	cds chromosome:12X:3:3389369:3396955:1 gene:VIT_03s0038g04610 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative rRNA methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I0L2]
Sequence	ATGGGGAAGGTGAAGGGCAAGCACCGTTTGGACAAGTTCTACCACCTCGCCAAAGAGCAC GGTTACCGTTCTCGAGCCGCATGGAAGCTCGTTCAGCTCGATTCAAAGTACAACTTCCTC CGCTCCTCCCGCGCCGTCCTCGACCTCTGCGCTGCACCTGGCGGTTGGATGCAAGCCGCC GTCGAACGCGTTCCCGTCGGCAGCTTCATCCTCGGCGTTGATCTCAATCCTATCGCTCCG GTCCGCGGCGCAATCTCCATCGAAGAGGACATCACGAAGCCTGCGTGTAAGGCTAGGGTT AAGAAGCTGATGAGTGAGTACGGATGTGCCGCTTTCGATATTGTTCTCCATGACGGTTCT CCGAATATAGGAGGCGCGTGGACGCAGGAGGCCACGGCTCAGAATGCGCTGGTTATCGAT GCGTTGAGGCTCGCGACTCAGTTCTTGGCTCCTAAAGGTGCATTTGTTACTAAGGTTTTC AGGTCACAAGACTACAATTCAGTCCTCTACTGCCTCAAGCAGCTGTTTGAGAAGGTTGAG GTTGATAAGCCAGCTGCTAGTCGTTCAACTTCTGCAGAAATTTTTGTTTTGGGCCTTAAG TATAAAGCTCCTGCAAAGATTGATCCACGCCTTCTTGATGTGAAGCATTTATTTCAGGGC ACCATAGAACCTCGAAAGGTGGTGGATGTACTTAGGGGAACAAAGCAAAAGAGACACCGT GATGGGTATGAGGATGGGGACACAACTTTGAGGAAAGTTTCTTCAGCTACAAACTTTATC TGGTCTGATACTCCTCTTGAGATCCTTGGTTCAGTTACTTCTATAAGCTTTGATGATCCT GCTTCTCTGCCTATAAAGGATCATGCTTTAACAACAGAAGAGGTTAAAACTCTTTGTGAT GATCTGCGTGTTTTGGGAAAGCAAGACTTCAAGCATCTTTTGAAGTGGCGGATGCATGTA AGGAAGGCTTTATCCCCTGTACAAAAGGCTACTTCTACTGCTGCAGAGGATGACCATGAG AAAGTTGTTGATGAAGATGAGAGAATGCTTAATGAAATGGAGGAGTTGACTTATGCTATG GAGCGCAAAAAGAAAAGAACAAAGAAACTTCTTGCAAAAAGACAAGCAAAGGATAAGGCT CGGAAGGTAACAGGAATGCAAGTAGATGCGCTGGAAGAGGGTTATACTGACCATGAATTA TTCTCTCTTTCTTCAATCAAGGCGAAGAAAGACCTTCTTGCTGTTAATTCCACCGAGTAT GATGAGGGTGATGGTGTGGTAGATAGTGAAGATGAAAGAACCCGTGAGGAAACCCAGGAG CATTCTGCCAGTGATATGGATTCTGATGAAGAACGGAGACGATATGATGAGCAAATGGAA GAGATGCTTGATCAAGTATACGAACAGTTTGTGGCCAGAAGGGAGGGAAGTACAAAGCAG CGTAAGCGTGCAAGAAAAAAGCATTCTGAGGATGACCTTTTGGAGCTTGGGTTTTCCCTT TTGGCCATGCAGGATGGTGATGATGATATAATTCATTCTGATCATGATTCCGATAACGAC AATCAGGCTGATCTTGAAGCAAATCCTCTCATGGTCCCACTCCATGGAGAGGAAATGCCG ACTCAAAGGGAGATTACAGATAAGTGGTTTAGCCAGGACATCTTTGCTGAAGCAGCAGAG GAGGGAGATTTGGGGAAGCACGAGAGTGAAGATGAAATGGAGGTGGACAGACAGGAGAAA ACACTCTCCATCCCAAAGAAGGCCAAGGAAAATAAAGCACGCAAACCTTCAGAGATCAAT CCCCCTCAAATTGAAGCTTCCAAGGCAGAAGAAGATTTTGAGATTGTCCCTGCTCCAAGT ACAGATTCGAGTGATGACTCATCCTCGGACGAATCAGATGATGAAGATATTCATGCAAAA GCTGAGATATTGGCTTGTGCAAAGAAGATGCTAAGGAAAAAGGAGAGGGAGAGGATACTT GATGATGCTTATAATAAGTACATGTTTCATGACAAAGGCTTGCCTCAATGGTTTGCGGAT GAGGAAGCCAGACACTGCCAGACTATTAAGCCTGTGACCAAAGAGGAGATAGCTGCAATG AGAGCACAATTTAAAGAAATTGATGCCCGGCCTGCAAAGAAGGTAGCAGAGGCCAAAGCC CGAAAGAAAAGGGCAGCAATGAGGAAGCTAGAGAAGGTTAGGAAGAAGGCAAACACTATT TCAGATCAGACTGACATCTCTGATCGTTCAAAGGGGAGGCTGATTGAACAACTTTATAAG AAGGCAGCGCCTAAAAGGCCTCAAAAGGAATATGTGGTTGCAAAGAAAGGGGTTCAAGTC AGGGCTGGGAAGGGTAAAGTCCTTGTTGATCGGCGCATGAAGAAGGATGCCAGGTCAAGA GGAATGAGCAAGCAAGGGAAAGGCCCTTCAAAGAAGGGTGGTTTCAGGAAGGGAAAGAAC GCAAATGGTCAAAAGGGTAATAAAGGGTCTGCAAAGGCTTCAGCTAAGAGCGGAAAGGGG GGAAGGAAAGGAAATAGGATGAACATGCACGACTGA

Peptide Sequence

PEP ID	VIT_03s0038g04610.t01
PEP Infomation	pep chromosome:12X:3:3389369:3396955:1 gene:VIT_03s0038g04610 transcript:VIT_03s0038g04610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative rRNA methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I0L2]
Sequence	MGKVKGKHRLDKFYHLAKEHGYRSRAAWKLVQLDSKYNFLRSSRAVLDLCAAPGGWMQAA VERVPVGSFILGVDLNPIAPVRGAISIEEDITKPACKARVKKLMSEYGCAAFDIVLHDGS PNIGGAWTQEATAQNALVIDALRLATQFLAPKGAFVTKVFRSQDYNSVLYCLKQLFEKVE VDKPAASRSTSAEIFVLGLKYKAPAKIDPRLLDVKHLFQGTIEPRKVVDVLRGTKQKRHR DGYEDGDTTLRKVSSATNFIWSDTPLEILGSVTSISFDDPASLPIKDHALTTEEVKTLCD DLRVLGKQDFKHLLKWRMHVRKALSPVQKATSTAAEDDHEKVVDEDERMLNEMEELTYAM ERKKKRTKKLLAKRQAKDKARKVTGMQVDALEEGYTDHELFSLSSIKAKKDLLAVNSTEY DEGDGVVDSEDERTREETQEHSASDMDSDEERRRYDEQMEEMLDQVYEQFVARREGSTKQ RKRARKKHSEDDLLELGFSLLAMQDGDDDIIHSDHDSDNDNQADLEANPLMVPLHGEEMP TQREITDKWFSQDIFAEAAEEGDLGKHESEDEMEVDRQEKTLSIPKKAKENKARKPSEIN PPQIEASKAEEDFEIVPAPSTDSSDDSSSDESDDEDIHAKAEILACAKKMLRKKERERIL DDAYNKYMFHDKGLPQWFADEEARHCQTIKPVTKEEIAAMRAQFKEIDARPAKKVAEAKA RKKRAAMRKLEKVRKKANTISDQTDISDRSKGRLIEQLYKKAAPKRPQKEYVVAKKGVQV RAGKGKVLVDRRMKKDARSRGMSKQGKGPSKKGGFRKGKNANGQKGNKGSAKASAKSGKG GRKGNRMNMHD

Transcript Sequence

Transcript ID	VIT_03s0038g04610.t01
Transcript Infomation	cdna chromosome:12X:3:3389369:3396955:1 gene:VIT_03s0038g04610 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative rRNA methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I0L2]
Sequence	CCCCGATAGCCTCTTTCGCACTGCCAAGTCCACGAGAACCCTAATCCTAACCCTAGCCTG TAACCCATTGCGAGATGGGGAAGGTGAAGGGCAAGCACCGTTTGGACAAGTTCTACCACC TCGCCAAAGAGCACGGTTACCGTTCTCGAGCCGCATGGAAGCTCGTTCAGCTCGATTCAA AGTACAACTTCCTCCGCTCCTCCCGCGCCGTCCTCGACCTCTGCGCTGCACCTGGCGGTT GGATGCAAGCCGCCGTCGAACGCGTTCCCGTCGGCAGCTTCATCCTCGGCGTTGATCTCA ATCCTATCGCTCCGGTCCGCGGCGCAATCTCCATCGAAGAGGACATCACGAAGCCTGCGT GTAAGGCTAGGGTTAAGAAGCTGATGAGTGAGTACGGATGTGCCGCTTTCGATATTGTTC TCCATGACGGTTCTCCGAATATAGGAGGCGCGTGGACGCAGGAGGCCACGGCTCAGAATG CGCTGGTTATCGATGCGTTGAGGCTCGCGACTCAGTTCTTGGCTCCTAAAGGTGCATTTG TTACTAAGGTTTTCAGGTCACAAGACTACAATTCAGTCCTCTACTGCCTCAAGCAGCTGT TTGAGAAGGTTGAGGTTGATAAGCCAGCTGCTAGTCGTTCAACTTCTGCAGAAATTTTTG TTTTGGGCCTTAAGTATAAAGCTCCTGCAAAGATTGATCCACGCCTTCTTGATGTGAAGC ATTTATTTCAGGGCACCATAGAACCTCGAAAGGTGGTGGATGTACTTAGGGGAACAAAGC AAAAGAGACACCGTGATGGGTATGAGGATGGGGACACAACTTTGAGGAAAGTTTCTTCAG CTACAAACTTTATCTGGTCTGATACTCCTCTTGAGATCCTTGGTTCAGTTACTTCTATAA GCTTTGATGATCCTGCTTCTCTGCCTATAAAGGATCATGCTTTAACAACAGAAGAGGTTA AAACTCTTTGTGATGATCTGCGTGTTTTGGGAAAGCAAGACTTCAAGCATCTTTTGAAGT GGCGGATGCATGTAAGGAAGGCTTTATCCCCTGTACAAAAGGCTACTTCTACTGCTGCAG AGGATGACCATGAGAAAGTTGTTGATGAAGATGAGAGAATGCTTAATGAAATGGAGGAGT TGACTTATGCTATGGAGCGCAAAAAGAAAAGAACAAAGAAACTTCTTGCAAAAAGACAAG CAAAGGATAAGGCTCGGAAGGTAACAGGAATGCAAGTAGATGCGCTGGAAGAGGGTTATA CTGACCATGAATTATTCTCTCTTTCTTCAATCAAGGCGAAGAAAGACCTTCTTGCTGTTA ATTCCACCGAGTATGATGAGGGTGATGGTGTGGTAGATAGTGAAGATGAAAGAACCCGTG AGGAAACCCAGGAGCATTCTGCCAGTGATATGGATTCTGATGAAGAACGGAGACGATATG ATGAGCAAATGGAAGAGATGCTTGATCAAGTATACGAACAGTTTGTGGCCAGAAGGGAGG GAAGTACAAAGCAGCGTAAGCGTGCAAGAAAAAAGCATTCTGAGGATGACCTTTTGGAGC TTGGGTTTTCCCTTTTGGCCATGCAGGATGGTGATGATGATATAATTCATTCTGATCATG ATTCCGATAACGACAATCAGGCTGATCTTGAAGCAAATCCTCTCATGGTCCCACTCCATG GAGAGGAAATGCCGACTCAAAGGGAGATTACAGATAAGTGGTTTAGCCAGGACATCTTTG CTGAAGCAGCAGAGGAGGGAGATTTGGGGAAGCACGAGAGTGAAGATGAAATGGAGGTGG ACAGACAGGAGAAAACACTCTCCATCCCAAAGAAGGCCAAGGAAAATAAAGCACGCAAAC CTTCAGAGATCAATCCCCCTCAAATTGAAGCTTCCAAGGCAGAAGAAGATTTTGAGATTG TCCCTGCTCCAAGTACAGATTCGAGTGATGACTCATCCTCGGACGAATCAGATGATGAAG ATATTCATGCAAAAGCTGAGATATTGGCTTGTGCAAAGAAGATGCTAAGGAAAAAGGAGA GGGAGAGGATACTTGATGATGCTTATAATAAGTACATGTTTCATGACAAAGGCTTGCCTC AATGGTTTGCGGATGAGGAAGCCAGACACTGCCAGACTATTAAGCCTGTGACCAAAGAGG AGATAGCTGCAATGAGAGCACAATTTAAAGAAATTGATGCCCGGCCTGCAAAGAAGGTAG CAGAGGCCAAAGCCCGAAAGAAAAGGGCAGCAATGAGGAAGCTAGAGAAGGTTAGGAAGA AGGCAAACACTATTTCAGATCAGACTGACATCTCTGATCGTTCAAAGGGGAGGCTGATTG AACAACTTTATAAGAAGGCAGCGCCTAAAAGGCCTCAAAAGGAATATGTGGTTGCAAAGA AAGGGGTTCAAGTCAGGGCTGGGAAGGGTAAAGTCCTTGTTGATCGGCGCATGAAGAAGG ATGCCAGGTCAAGAGGAATGAGCAAGCAAGGGAAAGGCCCTTCAAAGAAGGGTGGTTTCA GGAAGGGAAAGAACGCAAATGGTCAAAAGGGTAATAAAGGGTCTGCAAAGGCTTCAGCTA AGAGCGGAAAGGGGGGAAGGAAAGGAAATAGGATGAACATGCACGACTGACCTGCTGATA GCCTGTTAGTCATGAAATAACTAAGTTATCGCTTCCCTTCCAAAAAGGGTTTTTGGCCTT TTTTAAAAAAAAATTATTTTCCTTTATGCTTTTTGTTTTTAATTTCTAAAGTTAACAAGA AAGATTTATGGCGGAAGT