Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g04430.t01
CDS Infomation

cds chromosome:12X:3:3219386:3221440:1 gene:VIT_03s0038g04430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATCACCAGCTTGAGCCAAGCCATGCAGCTACACGCACAAATCCTCAAATCACCT
GACCCGAAAAAGCAGACCCGGAACCTCACCCCACTCTTCACCTTCGCTGCACTCTCACCG
GCCGGCGACCTCACCTACGCCCACCTCATCCTCAACTCCCTCTCCACTCAAAACTCCTTC
TTTCACAACACCATGATTCGAGCCTATTCTCAAACCCCCGACCCGACCCAAGCTCTGCAC
CTCTTCCTCTCAATGCTCTGCCAACCCACGTCACCCCGACCCGACAAGTTCACGTACCCA
TTCCTCCTCAAGTCATGCGCCCGATTGAAGCAACCCCGGGTAGGAAAGCAGCTCCATGGG
TTGATATACAAGTCGGGCCTAGAATCGGATCGGTACGTGTCGAACGGGTTGATCCATATG
TATTCGAGTTGCGGGAAGTCGGGTCGTGCGTACAAGGTGTTCGGGAAAATGCGTGACAGA
GATGTGGTGTCTTGGACATCGATGATCGATGGGTTTGTTGATGATGATCGGGCTCTTGAG
GCTATAAGGTTGTTTGAGGAAATGGTGGAAGATGGAGTTGAGCCCAATGAGGCAACTGTA
GTTTCGGTTCTGAGAGCTTGCGCAGACGCTGGAGCAGTTGGTATGGGGAGGAGAGTTCAA
GGGGTTATTGAGGAGAGAAAGATTGGTTTGGAGGCCAATGTGAGAACAGCTCTTATTGAC
ATGTATGCAAAATGCGGGTCCATTGGTAGTGCGAGGAAAGTGTTTGATGGGATTGTGAAT
AAGGATGTTTTTGCTTGGACTGCTATGATATCTGGCCTTGCTAACCATGGGCTGTGTGAG
GAGGCTGTTACTTTGTTTGATCAGATGGAGTCTTTTGGCCTAAGGCCGGATGAGAGGACA
ATGACTGCAGTTTTATCAGCTTGTAGGAATGCAGGCTGGTTTAGTGAAGGTTTTGCTTAT
TTTAATAGTATGTGGTGCAAATATGGAATAAAACCGACAATTCAGCACTATGGATGCATG
GTAGACCTCCTTGCTCGAACTGGGCATCTAGATGAGGCTGAGGAGTTTATTAGAAAGATG
CCCATTGAGCCTGATGTGGTTCTGTGGAGAACCTTGATATGGGCTTCTAAAGTTCATGGT
GACATTGATAGAAGTGAGCAGTTGATGAAAGATCGTGGGCTCCTAAAGATGGATTCTGAT
GATTGTGGGAGTTATGTACTTCTTGGAAATGTCTATGCATCTGCTGGGAAATGGCATGAT
AAGGCAAAGATGAGAGAGTTAATGAATCAAAAAGGGCTTTCAAAGCCACCAGGGTGTAGC
AGGATTGAAGTGGATGGCTTAGTCCATGAATTTGCAGCAGGAGATTCAGGTCACATTGAA
GCAGAAAAAATCTATGCAAAATTGGATGAAGTGGAAGAGAGATTGAAAGCAGAAGGGTAT
CATCCAAAACTCTCAGAGGTTCTGCTTGAAATTGACAACAAGGAGAAAGCTTTTCAACTG
CGTCACCATAGTGAAAAGCTTGCTGTTGCTTTTGGACTAATCAAAACTAGTCCAGGGACT
GAAATCCGCATTGTGAAAAACTTGCGATCTTGTGAGGACTGCCACTCTGTTTTGAAATTA
ATCTCAAAGATATACCAACAGGATATAATTGTTAGAGATCGGATCCGCTTCCATCATTTC
ATTAATGGGGACTGCTCATGTAAGGATTACTGGTAG

Peptide Sequence

PEP ID

VIT_03s0038g04430.t01
PEP Infomation

pep chromosome:12X:3:3219386:3221440:1 gene:VIT_03s0038g04430 transcript:VIT_03s0038g04430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEITSLSQAMQLHAQILKSPDPKKQTRNLTPLFTFAALSPAGDLTYAHLILNSLSTQNSF
FHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHG
LIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALE
AIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALID
MYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERT
MTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKM
PIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHD
KAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLKAEGY
HPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTEIRIVKNLRSCEDCHSVLKL
ISKIYQQDIIVRDRIRFHHFINGDCSCKDYW

Transcript Sequence

Transcript ID

VIT_03s0038g04430.t01
Transcript Infomation

cdna chromosome:12X:3:3219386:3221440:1 gene:VIT_03s0038g04430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TACATGAAATAGCATTGCTGTTGTTCCGCCCCTTTTTCAAAATGGATCGGGTATATTACA
ACTTTGGGTCATTTATTAGCAATTAGGAGGCCTCCATTCCGAGATGGGCCTGGAATAGGC
AATTCTATTTCACTGGTCATTCAAAAATTGGACCGGTTAATGACCCAAATCTTCGTACAA
ATATCCAAATCCATCCTCTTTGCGTCAATCCCCCTCCTGTGTCTCTCTAGCATGGAGATC
ACCAGCTTGAGCCAAGCCATGCAGCTACACGCACAAATCCTCAAATCACCTGACCCGAAA
AAGCAGACCCGGAACCTCACCCCACTCTTCACCTTCGCTGCACTCTCACCGGCCGGCGAC
CTCACCTACGCCCACCTCATCCTCAACTCCCTCTCCACTCAAAACTCCTTCTTTCACAAC
ACCATGATTCGAGCCTATTCTCAAACCCCCGACCCGACCCAAGCTCTGCACCTCTTCCTC
TCAATGCTCTGCCAACCCACGTCACCCCGACCCGACAAGTTCACGTACCCATTCCTCCTC
AAGTCATGCGCCCGATTGAAGCAACCCCGGGTAGGAAAGCAGCTCCATGGGTTGATATAC
AAGTCGGGCCTAGAATCGGATCGGTACGTGTCGAACGGGTTGATCCATATGTATTCGAGT
TGCGGGAAGTCGGGTCGTGCGTACAAGGTGTTCGGGAAAATGCGTGACAGAGATGTGGTG
TCTTGGACATCGATGATCGATGGGTTTGTTGATGATGATCGGGCTCTTGAGGCTATAAGG
TTGTTTGAGGAAATGGTGGAAGATGGAGTTGAGCCCAATGAGGCAACTGTAGTTTCGGTT
CTGAGAGCTTGCGCAGACGCTGGAGCAGTTGGTATGGGGAGGAGAGTTCAAGGGGTTATT
GAGGAGAGAAAGATTGGTTTGGAGGCCAATGTGAGAACAGCTCTTATTGACATGTATGCA
AAATGCGGGTCCATTGGTAGTGCGAGGAAAGTGTTTGATGGGATTGTGAATAAGGATGTT
TTTGCTTGGACTGCTATGATATCTGGCCTTGCTAACCATGGGCTGTGTGAGGAGGCTGTT
ACTTTGTTTGATCAGATGGAGTCTTTTGGCCTAAGGCCGGATGAGAGGACAATGACTGCA
GTTTTATCAGCTTGTAGGAATGCAGGCTGGTTTAGTGAAGGTTTTGCTTATTTTAATAGT
ATGTGGTGCAAATATGGAATAAAACCGACAATTCAGCACTATGGATGCATGGTAGACCTC
CTTGCTCGAACTGGGCATCTAGATGAGGCTGAGGAGTTTATTAGAAAGATGCCCATTGAG
CCTGATGTGGTTCTGTGGAGAACCTTGATATGGGCTTCTAAAGTTCATGGTGACATTGAT
AGAAGTGAGCAGTTGATGAAAGATCGTGGGCTCCTAAAGATGGATTCTGATGATTGTGGG
AGTTATGTACTTCTTGGAAATGTCTATGCATCTGCTGGGAAATGGCATGATAAGGCAAAG
ATGAGAGAGTTAATGAATCAAAAAGGGCTTTCAAAGCCACCAGGGTGTAGCAGGATTGAA
GTGGATGGCTTAGTCCATGAATTTGCAGCAGGAGATTCAGGTCACATTGAAGCAGAAAAA
ATCTATGCAAAATTGGATGAAGTGGAAGAGAGATTGAAAGCAGAAGGGTATCATCCAAAA
CTCTCAGAGGTTCTGCTTGAAATTGACAACAAGGAGAAAGCTTTTCAACTGCGTCACCAT
AGTGAAAAGCTTGCTGTTGCTTTTGGACTAATCAAAACTAGTCCAGGGACTGAAATCCGC
ATTGTGAAAAACTTGCGATCTTGTGAGGACTGCCACTCTGTTTTGAAATTAATCTCAAAG
ATATACCAACAGGATATAATTGTTAGAGATCGGATCCGCTTCCATCATTTCATTAATGGG
GACTGCTCATGTAAGGATTACTGGTAGCGGGAAGATTTATGTTTGAATAATGATTCAAAC
AGAGCTTTACGGCACATGTCATGTATCACATGAATAGAAAAGCAAAATTTGTAGAG