Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g04400.t01
CDS Infomation

cds chromosome:12X:3:3188175:3193837:-1 gene:VIT_03s0038g04400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTCTGCTTGTTGTGTTGCTGCTAGAGATAGAACAATAACAAATGGACCAAGCTGT
GAAGTTATGCAGCATAGAAATGTTCGATATTCACCATCATGGAGCTTCCGATGGGACAAC
CGAGGGCGTGTAGCAGGTGAAGTTGATACTTCTGCTAGTTGGTTTGCTGATGGCCTGAAC
AGGAACGGAGGATTGGAAAACAAATCCGAAACAACTTATGCATCAGATGGGGGAAGTCCA
TTAGAAAACTTTCAAACGCTTACATGGCAGAAGTCACCGGTTTCTGAAGGAACTGCTGGG
AATTTGACGACTCCTGCTTCAGATCAATCTATCTCAAGGAATATCTCTGTGGAAGTGAGT
GTGGAACATCTGGAGCTTGTTATTGTGAAGGAATCAACTGGATCCCCAGGAGTTTCAGAT
CCGTCTCCTGCTAAACTCTCACCCGCTTTGCCTTCACCTTCACCAACTTTGCCTTCACCT
TCGTCTTTGTCAACATCCCCTGTGTCATCCCAAAGTCATATTCTCCCTGCCACCTCAACC
CCATCAAGGTGGTCCAGAGGCTCTCCAGGGCATCATTTATTGCGGCAGGTATCTGATAGC
CGAATCCCAGGATTGAAATCACCAAACTACTCAATTTCTGAAGAAAGACCACCCTTTGTG
CTCCCTGTATGGAACAATGATTCAATTAGGGGCTCTTATGGTGGGTCTTCAGATGGTTGG
TCTATGCATGCTTTTTCTGAACTCATGGCTACTTCCCGTAGAGAAAGGTGGTCTTTTGAT
AGTGAATCTTTGGGCTTCAACCGTGATAAGATAACCAGGTCTAGTAGCAGAATTTCAGCA
TCTCCCTCTATCGATCTGCAAACTTGTGGTGTTTGCGCAAAGCTCTTGACTGAGAGATCT
TCATGGGGCGGCCAGAAAATTATTGCCAGTAACGAGCTCTCAGTGGTGGCGGTTTTAATT
TGTGGCCATGTTTACCATGCGGAGTGCTTGGAGAATATGACAGCTGAAATCAACAAGTAT
GACCCAGCTTGCCCGGTTTGTACTTTTGGAGAGAAGCAGACTCTAAAGTTGTCTGAGAAA
GCTCTGAAAGCAGAAATGGATTTGAAGGCTAAAAACAAGAGATCAAGGAACAGAGTTGTG
GATAGTGATCTTGATGGCGAAACTGTTGTATTTGATCATCGAAAAAGTAGTGGACGTGAA
GGTAAAGGACCCAAGCTGGGCTCCAGTTCCAGCATGAAGAGCTCCTTAGGAAAGCCTTTC
TTGAGGCGGCACTTCTCCTTTGGGTCCAAGGGGACTAAATCCTTCTCAGAGAGTCATCAA
TCTACTAGAAAGAAGGGATTTTTCTGGGCAAAATCTAGCAGGGAATGA

Peptide Sequence

PEP ID

VIT_03s0038g04400.t01
PEP Infomation

pep chromosome:12X:3:3188175:3193837:-1 gene:VIT_03s0038g04400 transcript:VIT_03s0038g04400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSACCVAARDRTITNGPSCEVMQHRNVRYSPSWSFRWDNRGRVAGEVDTSASWFADGLN
RNGGLENKSETTYASDGGSPLENFQTLTWQKSPVSEGTAGNLTTPASDQSISRNISVEVS
VEHLELVIVKESTGSPGVSDPSPAKLSPALPSPSPTLPSPSSLSTSPVSSQSHILPATST
PSRWSRGSPGHHLLRQVSDSRIPGLKSPNYSISEERPPFVLPVWNNDSIRGSYGGSSDGW
SMHAFSELMATSRRERWSFDSESLGFNRDKITRSSSRISASPSIDLQTCGVCAKLLTERS
SWGGQKIIASNELSVVAVLICGHVYHAECLENMTAEINKYDPACPVCTFGEKQTLKLSEK
ALKAEMDLKAKNKRSRNRVVDSDLDGETVVFDHRKSSGREGKGPKLGSSSSMKSSLGKPF
LRRHFSFGSKGTKSFSESHQSTRKKGFFWAKSSRE

Transcript Sequence

Transcript ID

VIT_03s0038g04400.t01
Transcript Infomation

cdna chromosome:12X:3:3188175:3193837:-1 gene:VIT_03s0038g04400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGCAGCAGAATCAGTTTCTCTCTCTAAAACTTCTCTCTCCAAAGGTCTCTGTGTTTCCC
CTTCAGAACTCTCTGTGGTTTCTCTCTCTAGGTTTCGCGTGTTTTCTCTCTTTCTCTCGT
CTGTGACGATCTTAGCGTGGAAAGAGGAAAGACAACCTTTTGGAATATTATTCTTAGAGG
TAACCATAATGGGTCTATCGGTCAAATGTAAAGTTCTGCAGATGTGAATGGTGTAGTTGC
TGGAAACTTCTGTCAATTTTATATGTATCTGAGTGGGCATGGGGTCTGCTTGTTGTGTTG
CTGCTAGAGATAGAACAATAACAAATGGACCAAGCTGTGAAGTTATGCAGCATAGAAATG
TTCGATATTCACCATCATGGAGCTTCCGATGGGACAACCGAGGGCGTGTAGCAGGTGAAG
TTGATACTTCTGCTAGTTGGTTTGCTGATGGCCTGAACAGGAACGGAGGATTGGAAAACA
AATCCGAAACAACTTATGCATCAGATGGGGGAAGTCCATTAGAAAACTTTCAAACGCTTA
CATGGCAGAAGTCACCGGTTTCTGAAGGAACTGCTGGGAATTTGACGACTCCTGCTTCAG
ATCAATCTATCTCAAGGAATATCTCTGTGGAAGTGAGTGTGGAACATCTGGAGCTTGTTA
TTGTGAAGGAATCAACTGGATCCCCAGGAGTTTCAGATCCGTCTCCTGCTAAACTCTCAC
CCGCTTTGCCTTCACCTTCACCAACTTTGCCTTCACCTTCGTCTTTGTCAACATCCCCTG
TGTCATCCCAAAGTCATATTCTCCCTGCCACCTCAACCCCATCAAGGTGGTCCAGAGGCT
CTCCAGGGCATCATTTATTGCGGCAGGTATCTGATAGCCGAATCCCAGGATTGAAATCAC
CAAACTACTCAATTTCTGAAGAAAGACCACCCTTTGTGCTCCCTGTATGGAACAATGATT
CAATTAGGGGCTCTTATGGTGGGTCTTCAGATGGTTGGTCTATGCATGCTTTTTCTGAAC
TCATGGCTACTTCCCGTAGAGAAAGGTGGTCTTTTGATAGTGAATCTTTGGGCTTCAACC
GTGATAAGATAACCAGGTCTAGTAGCAGAATTTCAGCATCTCCCTCTATCGATCTGCAAA
CTTGTGGTGTTTGCGCAAAGCTCTTGACTGAGAGATCTTCATGGGGCGGCCAGAAAATTA
TTGCCAGTAACGAGCTCTCAGTGGTGGCGGTTTTAATTTGTGGCCATGTTTACCATGCGG
AGTGCTTGGAGAATATGACAGCTGAAATCAACAAGTATGACCCAGCTTGCCCGGTTTGTA
CTTTTGGAGAGAAGCAGACTCTAAAGTTGTCTGAGAAAGCTCTGAAAGCAGAAATGGATT
TGAAGGCTAAAAACAAGAGATCAAGGAACAGAGTTGTGGATAGTGATCTTGATGGCGAAA
CTGTTGTATTTGATCATCGAAAAAGTAGTGGACGTGAAGGTAAAGGACCCAAGCTGGGCT
CCAGTTCCAGCATGAAGAGCTCCTTAGGAAAGCCTTTCTTGAGGCGGCACTTCTCCTTTG
GGTCCAAGGGGACTAAATCCTTCTCAGAGAGTCATCAATCTACTAGAAAGAAGGGATTTT
TCTGGGCAAAATCTAGCAGGGAATGAGCTTCTTCACAGCTTTTAAGAGATGCAGCCTGCG
ATCACGGTTGGGCACCCGAATTGTGAAGGGAGCAGGGCGGCACTCATCACATATCCTGTT
AAGAAACATCTGTATTGGTGGATCTTCATATGTTTCAACCAGCAGGCCTTTAGCTAGTGA
ATTTACACTGTAAAGAAAAGAAAGAAAAAGGAGAAATATATAAAAGAACAATCCATCATG
TTGATGGAAGAAGCAAAAAAGGAAAAAAAAATAATAAAAAAATAGTAGAATGGAAAAGCA
TTATGACACTAGTATTCTGTTCTTGTTTTGTACAGTTGAATTTGTTTCTTGCCTCTTGAA
ACATACATGAATTGATTCATAGAAACTCCATATGACTACTACCACTAGAGAGCCAAGCTG
AGTCTGCCAAGAAACACATTGCTGAGCCAACTCTCGACTCTTGAGGGCTTTTGATTTGTC
TATCACATTAGTTATCCTTTAATTTCTTTAGGAAA