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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g04360.t01
CDS Infomation

cds chromosome:12X:3:3165510:3173838:-1 gene:VIT_03s0038g04360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAACCCTACTCCTTCACATCCTCAGCCAGCATAGCCCAGAAAACATGGGAACTGGAG
AACAACATTGCCTCCATGGACGCCCCCTCAGCCGATTCCGACTCCATCTTCTTCTACGAC
GATGCTGCTCAGGCAAAGTTCCAGCAGGAGAAGCCCTGGGCCAATGACCCCCACTACTTC
AAGCGCGTCAAGATCTCTGCCCTAGCTCTCCTCAAGATGGTCGTCCACGCCCGCTCCGGC
GGCAACATCGAGGTCATGGGCCTTATGCAGGGCAAGACCGACGGCGACGCCATTATTGTC
ATGGACGCCTTCGCTTTGCCCGTTGAAGGCACCGAAACTAGGGTTAATGCTCAGGCCGAT
GCTTATGAGTATATGGTTGATTATTCCCAGACCAACAAGCAGGCAGGACGGCTGGAAAAT
GTAGTTGGGTGGTACCACTCTCATCCTGGTTATGGATGCTGGCTTTCGGGTATTGATGTT
TCAACACAAATGCTCAACCAACAGTTTCAGGAGCCCTTTCTCGCAGTTGTTATTGATCCA
ACAAGGACTGTTTCTGCTGGAAAAGTTGAGATTGGAGCATTCAGGACATACCCAGAAGGA
TACAAGCCTCCAGATGACCCTGTCTCTGAATATCAGACCATTCCTTTGAATAAGATTGAA
GACTTTGGTGTACATTGTAAACAGTATTATGCATTGGACATAACATATTTCAAGTCTTCT
CTTGATTGTCACCTCTTGGATCTTCTGTGGAATAAATATTGGGTCAACACTTTGTCATCT
TCTCCTTTGTTGGGGAATGGAGACTATGTTGCAGGACAAATTTCAGATCTAGCGGAAAAG
CTGGAGCAGGCAGAGAATCAATTGGCTCATTCGCGCTTTGGACCCCTAATAGCACCTTCC
CAAAGAAAGAAAGAGGAGGAATCTCAACTTGCTAAGATAACTCGAGATAGTGCAAAGATT
ACTGTTGAGCAAGTGCATGGGCTAATGTCGCAGGTTATCAAGGACATTCTTTTCAACTCT
GTGCGCCAGTCTAACAGATCTCGCACTGAGCCATCTGGCCCAGAACCCATGATTGAAACT
TGA

Peptide Sequence

PEP ID

VIT_03s0038g04360.t01
PEP Infomation

pep chromosome:12X:3:3165510:3173838:-1 gene:VIT_03s0038g04360 transcript:VIT_03s0038g04360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEPYSFTSSASIAQKTWELENNIASMDAPSADSDSIFFYDDAAQAKFQQEKPWANDPHYF
KRVKISALALLKMVVHARSGGNIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQAD
AYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP
TRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSS
LDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPS
QRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSNRSRTEPSGPEPMIET

Transcript Sequence

Transcript ID

VIT_03s0038g04360.t01
Transcript Infomation

cdna chromosome:12X:3:3165510:3173838:-1 gene:VIT_03s0038g04360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAGAAGTGAAGAGGTTGGGACGGTTTGTGCGTTTTGCTCTTCCACAATGGAACCCTAC
TCCTTCACATCCTCAGCCAGCATAGCCCAGAAAACATGGGAACTGGAGAACAACATTGCC
TCCATGGACGCCCCCTCAGCCGATTCCGACTCCATCTTCTTCTACGACGATGCTGCTCAG
GCAAAGTTCCAGCAGGAGAAGCCCTGGGCCAATGACCCCCACTACTTCAAGCGCGTCAAG
ATCTCTGCCCTAGCTCTCCTCAAGATGGTCGTCCACGCCCGCTCCGGCGGCAACATCGAG
GTCATGGGCCTTATGCAGGGCAAGACCGACGGCGACGCCATTATTGTCATGGACGCCTTC
GCTTTGCCCGTTGAAGGCACCGAAACTAGGGTTAATGCTCAGGCCGATGCTTATGAGTAT
ATGGTTGATTATTCCCAGACCAACAAGCAGGCAGGACGGCTGGAAAATGTAGTTGGGTGG
TACCACTCTCATCCTGGTTATGGATGCTGGCTTTCGGGTATTGATGTTTCAACACAAATG
CTCAACCAACAGTTTCAGGAGCCCTTTCTCGCAGTTGTTATTGATCCAACAAGGACTGTT
TCTGCTGGAAAAGTTGAGATTGGAGCATTCAGGACATACCCAGAAGGATACAAGCCTCCA
GATGACCCTGTCTCTGAATATCAGACCATTCCTTTGAATAAGATTGAAGACTTTGGTGTA
CATTGTAAACAGTATTATGCATTGGACATAACATATTTCAAGTCTTCTCTTGATTGTCAC
CTCTTGGATCTTCTGTGGAATAAATATTGGGTCAACACTTTGTCATCTTCTCCTTTGTTG
GGGAATGGAGACTATGTTGCAGGACAAATTTCAGATCTAGCGGAAAAGCTGGAGCAGGCA
GAGAATCAATTGGCTCATTCGCGCTTTGGACCCCTAATAGCACCTTCCCAAAGAAAGAAA
GAGGAGGAATCTCAACTTGCTAAGATAACTCGAGATAGTGCAAAGATTACTGTTGAGCAA
GTGCATGGGCTAATGTCGCAGGTTATCAAGGACATTCTTTTCAACTCTGTGCGCCAGTCT
AACAGATCTCGCACTGAGCCATCTGGCCCAGAACCCATGATTGAAACTTGATTTGGGTAC
CTTCTTCAACAGCAGTACCCTAAAAATGCTTCTACATCTCCAGATTTTCCCTTGCACGAG
TGGTTAACCAACACCAAGGTTGATCATTTGGGGCTATGAAAGTTTTGATATCATTTATGG
TGACGTAAATCCCTTGCTTGATCATTTGCCAATTTATTTTGGAATTTTAGGGTTTGCATA
TTTGTATTTAGTCAGCGTTTTGAACGCCTTGACGAGTAATGGTAATCGAAGACCGTGTTA
CACATCTACA