Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_03s0038g04100.t01
CDS Infomation	cds chromosome:12X:3:2970459:2972817:1 gene:VIT_03s0038g04100 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl coenzyme A reductase [Source:UniProtKB/TrEMBL;Acc:F6I0P8]
Sequence	ATGGATGTCCGACGGCGACCAGTTGGGTCTGTCGAGGCCAAGCCTAATGGGAAACCCCTT GTGGAGGTTGATGTTGATGTGCATGATCCCATCAAGGCTTCTGATGCACTGCCTCTCCCG CTCTATCTCGCCAACGCGGTCTTCTTTGGGGTTTTCTTCTCCGTCGTCTATTTCCTCCTG ACGCGGTGGCGGGAGAAGATCCGTACGTCGACCCCTCTCCACGTCGTCACCTTGTCGGAG ATTGCTGCCATCGTTACCTTTATGGGTTCGTGTATTTTTCTTCTGGGGTTCTTTGGGATC GACTTCGTTCAGGGGTTTATCGCCCGCCCTGGTCACGATAATGAGTGGGATGCAGAGGAT GATATTATCGTCAAGGAGGACGCTCGCGCCGTCCCCTGCGGCGCCGCGATAGACTGCGCT CCTCCGGTTGTGGCTGTGGCTTCTCCCAAGCCTAAGGTGCCCGTTTCCCCTCCGTCGTCT GAGGAAGACGAGGAAATCATCAAGTCGGTGGTGGCCGGTGCCATTCCTTCGTACTCGCTG GAGTCCAGGCTCGGGGACTGCAGGCGCGCCGCGGCGATCCGCCGCGAGGCGTTGCAGAGG ATGACCGGAACGTCGCTGGAGGGGCTGCCGCTGGAGGGTCTCGATTACGAGTCGATTTTG GGGCAGTGCTGTGAGATGCCGGTGGGGTATATTCAAATTCCGGTGGGGATCGCGGGGCCG CTGTTGTTGGATGGAAGAGAGTACTCCATTCCAATGGCGACCACCGAAGGGTGCTTGGTG GCGAGCACCAACAGGGGTTGCAAAGCCATCTACGCCTCTGGTGGCGCCACAAGCGTGTTG TTGAGAGATGCCATGACCAGAGCTCCGGTTGTCAGGTTCGGCACCGCCAAGAGGGCTGCT GAATTGATGTTGTTCCTGGAGAATCCCCTCAACTTCGAGACCTTGGCCCTGGTCTTCAAC AGGTCCAGCAGATTCGGGAAGCTCCAGAGCATCAAATGCGCAATTGCAGGGAAGAACCTG TACATCAGATTCTCAAGCAGCACTGGAGATGCAATGGGGATGAACATGATCTCCAAAGGC GTCCAGAATGTTTTGGATTTCCTTCAGAATGATTTCCCCGACATGGATGTCATCGGCATC TCTGGAAATTACTGCTCGGACAAGAAGCCAACTGCAGTGAACTGGATTGAAGGACGTGGG AAATCCGTGGTCTGCGAGGCCATCATCAAGGAGGAGGTGGTGAAGAAGGTGTTGAAGACC AATGTGGCTGCTTTGGTGGAGCTTAACATGCTCAAGAACCTCACTGGTTCTGCCATGGCT GGAGCCCTTGGCGGATTCAACGCCCACGCCAGCAACATTGTCTCTGCAGTCTACATAGCC ACAGGCCAAGACCCCGCCCAGAATGTGGAGAGCTCTCACTGTATCACCATGATGGAGGCT GTCAACGATGGAAAAGACCTCCACGTCTCAGTCACCATGCCCTCTATCGAGGTTGGCACA GTTGGAGGTGGCACCCAACTTGCATCTCAGTCAGCTTGTCTGAACCTGCTTGGGGTGAAG GGTGCAAACAAAGAATCGCCGGGAACAAACGCAAGGCTGCTGGCCACCATTGTCGCAGGT TCGGTTCTTGCAGGGGAGCTCTCCCTCATGTCTGCAATTGCAGCTGGACAGCTTGTTAGG AGCCACATGAAATATAACAGGTCCAACAAGGATGTTTCCAAGGCTTGA

Peptide Sequence

PEP ID	VIT_03s0038g04100.t01
PEP Infomation	pep chromosome:12X:3:2970459:2972817:1 gene:VIT_03s0038g04100 transcript:VIT_03s0038g04100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl coenzyme A reductase [Source:UniProtKB/TrEMBL;Acc:F6I0P8]
Sequence	MDVRRRPVGSVEAKPNGKPLVEVDVDVHDPIKASDALPLPLYLANAVFFGVFFSVVYFLL TRWREKIRTSTPLHVVTLSEIAAIVTFMGSCIFLLGFFGIDFVQGFIARPGHDNEWDAED DIIVKEDARAVPCGAAIDCAPPVVAVASPKPKVPVSPPSSEEDEEIIKSVVAGAIPSYSL ESRLGDCRRAAAIRREALQRMTGTSLEGLPLEGLDYESILGQCCEMPVGYIQIPVGIAGP LLLDGREYSIPMATTEGCLVASTNRGCKAIYASGGATSVLLRDAMTRAPVVRFGTAKRAA ELMLFLENPLNFETLALVFNRSSRFGKLQSIKCAIAGKNLYIRFSSSTGDAMGMNMISKG VQNVLDFLQNDFPDMDVIGISGNYCSDKKPTAVNWIEGRGKSVVCEAIIKEEVVKKVLKT NVAALVELNMLKNLTGSAMAGALGGFNAHASNIVSAVYIATGQDPAQNVESSHCITMMEA VNDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANKESPGTNARLLATIVAG SVLAGELSLMSAIAAGQLVRSHMKYNRSNKDVSKA

Transcript Sequence

Transcript ID	VIT_03s0038g04100.t01
Transcript Infomation	cdna chromosome:12X:3:2970459:2972817:1 gene:VIT_03s0038g04100 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl coenzyme A reductase [Source:UniProtKB/TrEMBL;Acc:F6I0P8]
Sequence	AATCCACACACCCTTCATTTCTAGATCTTCTCTTTTTCTTTCTGTGCGATTTTCGCCGCT GGTGAATCCATCTGCAGTCATGGATGTCCGACGGCGACCAGTTGGGTCTGTCGAGGCCAA GCCTAATGGGAAACCCCTTGTGGAGGTTGATGTTGATGTGCATGATCCCATCAAGGCTTC TGATGCACTGCCTCTCCCGCTCTATCTCGCCAACGCGGTCTTCTTTGGGGTTTTCTTCTC CGTCGTCTATTTCCTCCTGACGCGGTGGCGGGAGAAGATCCGTACGTCGACCCCTCTCCA CGTCGTCACCTTGTCGGAGATTGCTGCCATCGTTACCTTTATGGGTTCGTGTATTTTTCT TCTGGGGTTCTTTGGGATCGACTTCGTTCAGGGGTTTATCGCCCGCCCTGGTCACGATAA TGAGTGGGATGCAGAGGATGATATTATCGTCAAGGAGGACGCTCGCGCCGTCCCCTGCGG CGCCGCGATAGACTGCGCTCCTCCGGTTGTGGCTGTGGCTTCTCCCAAGCCTAAGGTGCC CGTTTCCCCTCCGTCGTCTGAGGAAGACGAGGAAATCATCAAGTCGGTGGTGGCCGGTGC CATTCCTTCGTACTCGCTGGAGTCCAGGCTCGGGGACTGCAGGCGCGCCGCGGCGATCCG CCGCGAGGCGTTGCAGAGGATGACCGGAACGTCGCTGGAGGGGCTGCCGCTGGAGGGTCT CGATTACGAGTCGATTTTGGGGCAGTGCTGTGAGATGCCGGTGGGGTATATTCAAATTCC GGTGGGGATCGCGGGGCCGCTGTTGTTGGATGGAAGAGAGTACTCCATTCCAATGGCGAC CACCGAAGGGTGCTTGGTGGCGAGCACCAACAGGGGTTGCAAAGCCATCTACGCCTCTGG TGGCGCCACAAGCGTGTTGTTGAGAGATGCCATGACCAGAGCTCCGGTTGTCAGGTTCGG CACCGCCAAGAGGGCTGCTGAATTGATGTTGTTCCTGGAGAATCCCCTCAACTTCGAGAC CTTGGCCCTGGTCTTCAACAGGTCCAGCAGATTCGGGAAGCTCCAGAGCATCAAATGCGC AATTGCAGGGAAGAACCTGTACATCAGATTCTCAAGCAGCACTGGAGATGCAATGGGGAT GAACATGATCTCCAAAGGCGTCCAGAATGTTTTGGATTTCCTTCAGAATGATTTCCCCGA CATGGATGTCATCGGCATCTCTGGAAATTACTGCTCGGACAAGAAGCCAACTGCAGTGAA CTGGATTGAAGGACGTGGGAAATCCGTGGTCTGCGAGGCCATCATCAAGGAGGAGGTGGT GAAGAAGGTGTTGAAGACCAATGTGGCTGCTTTGGTGGAGCTTAACATGCTCAAGAACCT CACTGGTTCTGCCATGGCTGGAGCCCTTGGCGGATTCAACGCCCACGCCAGCAACATTGT CTCTGCAGTCTACATAGCCACAGGCCAAGACCCCGCCCAGAATGTGGAGAGCTCTCACTG TATCACCATGATGGAGGCTGTCAACGATGGAAAAGACCTCCACGTCTCAGTCACCATGCC CTCTATCGAGGTTGGCACAGTTGGAGGTGGCACCCAACTTGCATCTCAGTCAGCTTGTCT GAACCTGCTTGGGGTGAAGGGTGCAAACAAAGAATCGCCGGGAACAAACGCAAGGCTGCT GGCCACCATTGTCGCAGGTTCGGTTCTTGCAGGGGAGCTCTCCCTCATGTCTGCAATTGC AGCTGGACAGCTTGTTAGGAGCCACATGAAATATAACAGGTCCAACAAGGATGTTTCCAA GGCTTGATTTCCCAATCTTGAGGCCACTATAAACCTCAGAATGTTGTAAAAACATAGCGG TGTAGAAACCAATCGTGAACAACAAGGCATGGAGGGGATAAGAAATATCAAAGCATGCCA AGCCAAGGAAAACAAAACTGTTTTTGTATTCTTTCCTTGAAGCCATGTATAAGAAAACTC TGCAAATTCTGTTGTAAAGTTGGGGGAGTCCAGTGTTCTTTATATGAATCATCTTTTTC