Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g04010.t01
CDS Infomation

cds chromosome:12X:3:2913178:2918354:-1 gene:VIT_03s0038g04010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGCTCATCTGAATTGGTGGCCTTCCCTTTGCTACTGACTCCGATCGAATCCAAC
TACAGGGCATGCACTATTCCCTATAGATTCCCCTCTGATAATCCCCGGAAGGCAACCCCT
ACTGAGCTTTCCTGGATTGATCTTTTCCTCAATTCCATCCCCTCTTTCAGGAAACGAGCA
GAGAGTGATGGAACTGTTGCTGATGCTAATGTTAAAGCTGAAAAATTTGCTCAAAGGTAC
TCCGAAATACTAGAGGACCTTAAGAAGGACCCTGAAAGTCATGGTGGGCCACCTGATTGC
GTTCTTCTCTGCAGGCTTCGCGAACAAGTTCTTAGAGAATTGGGATTCAGAGATATATTC
AAGAAAGTTAAGGATGAAGAGAACGCTAAGGCTATATCCCTATTTGAGAATGTTGTTCAT
CTTAATGATGCCATTGAAGATGAAAGCAAGCGTTTGGAGAATCTGGTTAGAGGGATTTTT
GCGGGGAACATATTTGATCTTGGTTCTGCACAGCTTGCAGAGGTTTTCTCAAAGGATGGG
ATGTCCTTTCTGGCTAGTTGTCAGAACCTTGTCCCTCGACCTTGGGTTATTGATGATTTG
GACTCTTTTAAACTGAAATGGAGTAGAAAATCTTGGAAAAAGGTAATAATTTTTGTTGAT
AATTCTGGTGCGGACATCATTTTGGGTATTTTGCCGTTTGCAAGAGAGTTACTCCGATGT
GGGTCACAGGTTGTCTTGGCAGCTAACGATTTACCTTCAATCAATGATGTAACTTACCCT
GAACTAATTGAGATAATAGCAAAGTTGAAGGATGAAAATGGGCAGCTGGTGGGTGTTGAT
ACTTCTAATCTTTTGATTGCCAATTCTGGTAATGATTTACCGGTTATTGATCTTACAAGA
ATATCGCAAGAGCTTGCCTACCTGGCTAGTGATGCTGACCTTGTCATATTGGAAGGAATG
GGTCGTGGAATAGAGACAAACCTTTATGCTCAATTTAAGTGTGATTCACTCAAAATTGGA
ATGGTGAAGCATCTAGAGGTTGCCCAGTTCCTTGGAGGGCGGCTTTATGACTGTGTCTTC
AAATACAATGAAGTTTTGAGTTAA

Peptide Sequence

PEP ID

VIT_03s0038g04010.t01
PEP Infomation

pep chromosome:12X:3:2913178:2918354:-1 gene:VIT_03s0038g04010 transcript:VIT_03s0038g04010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESSSELVAFPLLLTPIESNYRACTIPYRFPSDNPRKATPTELSWIDLFLNSIPSFRKRA
ESDGTVADANVKAEKFAQRYSEILEDLKKDPESHGGPPDCVLLCRLREQVLRELGFRDIF
KKVKDEENAKAISLFENVVHLNDAIEDESKRLENLVRGIFAGNIFDLGSAQLAEVFSKDG
MSFLASCQNLVPRPWVIDDLDSFKLKWSRKSWKKVIIFVDNSGADIILGILPFARELLRC
GSQVVLAANDLPSINDVTYPELIEIIAKLKDENGQLVGVDTSNLLIANSGNDLPVIDLTR
ISQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAQFLGGRLYDCVF
KYNEVLS

Transcript Sequence

Transcript ID

VIT_03s0038g04010.t01
Transcript Infomation

cdna chromosome:12X:3:2913178:2918354:-1 gene:VIT_03s0038g04010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAAAGGGGAAGAAGGAGAACAATGGAGAGCTCATCTGAATTGGTGGCCTTCCCTTTGCT
ACTGACTCCGATCGAATCCAACTACAGGGCATGCACTATTCCCTATAGATTCCCCTCTGA
TAATCCCCGGAAGGCAACCCCTACTGAGCTTTCCTGGATTGATCTTTTCCTCAATTCCAT
CCCCTCTTTCAGGAAACGAGCAGAGAGTGATGGAACTGTTGCTGATGCTAATGTTAAAGC
TGAAAAATTTGCTCAAAGGTACTCCGAAATACTAGAGGACCTTAAGAAGGACCCTGAAAG
TCATGGTGGGCCACCTGATTGCGTTCTTCTCTGCAGGCTTCGCGAACAAGTTCTTAGAGA
ATTGGGATTCAGAGATATATTCAAGAAAGTTAAGGATGAAGAGAACGCTAAGGCTATATC
CCTATTTGAGAATGTTGTTCATCTTAATGATGCCATTGAAGATGAAAGCAAGCGTTTGGA
GAATCTGGTTAGAGGGATTTTTGCGGGGAACATATTTGATCTTGGTTCTGCACAGCTTGC
AGAGGTTTTCTCAAAGGATGGGATGTCCTTTCTGGCTAGTTGTCAGAACCTTGTCCCTCG
ACCTTGGGTTATTGATGATTTGGACTCTTTTAAACTGAAATGGAGTAGAAAATCTTGGAA
AAAGGTAATAATTTTTGTTGATAATTCTGGTGCGGACATCATTTTGGGTATTTTGCCGTT
TGCAAGAGAGTTACTCCGATGTGGGTCACAGGTTGTCTTGGCAGCTAACGATTTACCTTC
AATCAATGATGTAACTTACCCTGAACTAATTGAGATAATAGCAAAGTTGAAGGATGAAAA
TGGGCAGCTGGTGGGTGTTGATACTTCTAATCTTTTGATTGCCAATTCTGGTAATGATTT
ACCGGTTATTGATCTTACAAGAATATCGCAAGAGCTTGCCTACCTGGCTAGTGATGCTGA
CCTTGTCATATTGGAAGGAATGGGTCGTGGAATAGAGACAAACCTTTATGCTCAATTTAA
GTGTGATTCACTCAAAATTGGAATGGTGAAGCATCTAGAGGTTGCCCAGTTCCTTGGAGG
GCGGCTTTATGACTGTGTCTTCAAATACAATGAAGTTTTGAGTTAATGTCAATTCTTACT
ACTATTTTTTATCGAATTGATTTATATTGGAGCCTTCAACCCATGTAGCACAAGGTATTT
TGTCCTTGTGGAACTTATGTCTTATGCTGAAGTTTTAGTATCAATAAATTAAAGAAAATG
CTGAAAAACTCCTTGCATACATAA