Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g04000.t01
CDS Infomation

cds chromosome:12X:3:2911405:2912919:1 gene:VIT_03s0038g04000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCTTCTTTCCTCATTTTCTAAGGTCTCCATCCTTGCTTTGTCTCTGTCCCTCCTT
GCTTTTTCTTCTCTGGCTCGTGATTTTTCCATTGTGGGTTACTCACCGGAGGACTTGACC
TGCATAGATAAGCTCATTGCTCGCTTTGAATCATGGGTGTCGAAACATGGCAAAGTTTAT
AAGAGCATGGAAGAGAAGCTGCATAGGTTTGAGGTGTTCAGAGAAAACTTGAATCACATT
GATGAGAGGAACAAGGAGGTGAGTAGCTACTGGCTTGGGTTGAATGAGTTTGCAGACTTG
AGCCACGAAGAGTTTAAGAGCAAGTACTTGGGATTGAGAGCTGAGTTCCCCAGAAGTAGG
GATTATTCTGGGGAATTCAGGTATAGAGATGTTGCTGATTTGCCGGAGTCTGTGGACTGG
AGGAAGAAAGGAGCTGTTACCCATGTCAAGAACCAAGGTGCATGTGGTAGTTGTTGGGCA
TTTTCAACAGTTGCTGCTGTTGAGGGCATCAACCAGATTGTGACAGGAAATCTAACGACA
CTGTCAGAGCAAGAGTTGATTGACTGTGACACAACCTTCAACAGTGGCTGCAATGGAGGC
TTGATGGATTATGCATTTGCCTTCATAGCTTCTAATGGTGGCCTACACAAGGAGGATGAT
TACCCATATCTAATGGAGGAAGGCACTTGTGAGGAACAGAAGGAAGATGTGGATATTGTG
ACAATTAGTGGTTATGAAGATGTGCCAGAGAAGGATGAAGAGAGTCTCTTGAAGGCACTC
GCTCACCAGCCACTCAGTGTTGCTATTGAGGCTTCAGGCAGAGATTTCCAGTTTTACAGC
GGGGGAGTATTCAATGGGCCTTGTGGAACTGAACTGGATCATGGAGTGGCTGCTGTGGGA
TATGGATCATCAAAGGGGTTGGATTACATCATTGTGAAGAACTCATGGGGACCAAAATGG
GGTGAGAAAGGGTACATAAGGATGAAGAGAAATACAGGAAAAACTGAAGGGCTCTGTGGT
ATCAACAAAATGGCTTCTTACCCTACCAAAGATAACTGA

Peptide Sequence

PEP ID

VIT_03s0038g04000.t01
PEP Infomation

pep chromosome:12X:3:2911405:2912919:1 gene:VIT_03s0038g04000 transcript:VIT_03s0038g04000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALLSSFSKVSILALSLSLLAFSSLARDFSIVGYSPEDLTCIDKLIARFESWVSKHGKVY
KSMEEKLHRFEVFRENLNHIDERNKEVSSYWLGLNEFADLSHEEFKSKYLGLRAEFPRSR
DYSGEFRYRDVADLPESVDWRKKGAVTHVKNQGACGSCWAFSTVAAVEGINQIVTGNLTT
LSEQELIDCDTTFNSGCNGGLMDYAFAFIASNGGLHKEDDYPYLMEEGTCEEQKEDVDIV
TISGYEDVPEKDEESLLKALAHQPLSVAIEASGRDFQFYSGGVFNGPCGTELDHGVAAVG
YGSSKGLDYIIVKNSWGPKWGEKGYIRMKRNTGKTEGLCGINKMASYPTKDN

Transcript Sequence

Transcript ID

VIT_03s0038g04000.t01
Transcript Infomation

cdna chromosome:12X:3:2911405:2912919:1 gene:VIT_03s0038g04000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCAATGGCTCTTCTTTCCTCATTTTCTAAGGTCTCCATCCTTGCTTTGTCTCTGTCCCTC
CTTGCTTTTTCTTCTCTGGCTCGTGATTTTTCCATTGTGGGTTACTCACCGGAGGACTTG
ACCTGCATAGATAAGCTCATTGCTCGCTTTGAATCATGGGTGTCGAAACATGGCAAAGTT
TATAAGAGCATGGAAGAGAAGCTGCATAGGTTTGAGGTGTTCAGAGAAAACTTGAATCAC
ATTGATGAGAGGAACAAGGAGGTGAGTAGCTACTGGCTTGGGTTGAATGAGTTTGCAGAC
TTGAGCCACGAAGAGTTTAAGAGCAAGTACTTGGGATTGAGAGCTGAGTTCCCCAGAAGT
AGGGATTATTCTGGGGAATTCAGGTATAGAGATGTTGCTGATTTGCCGGAGTCTGTGGAC
TGGAGGAAGAAAGGAGCTGTTACCCATGTCAAGAACCAAGGTGCATGTGGTAGTTGTTGG
GCATTTTCAACAGTTGCTGCTGTTGAGGGCATCAACCAGATTGTGACAGGAAATCTAACG
ACACTGTCAGAGCAAGAGTTGATTGACTGTGACACAACCTTCAACAGTGGCTGCAATGGA
GGCTTGATGGATTATGCATTTGCCTTCATAGCTTCTAATGGTGGCCTACACAAGGAGGAT
GATTACCCATATCTAATGGAGGAAGGCACTTGTGAGGAACAGAAGGAAGATGTGGATATT
GTGACAATTAGTGGTTATGAAGATGTGCCAGAGAAGGATGAAGAGAGTCTCTTGAAGGCA
CTCGCTCACCAGCCACTCAGTGTTGCTATTGAGGCTTCAGGCAGAGATTTCCAGTTTTAC
AGCGGGGGAGTATTCAATGGGCCTTGTGGAACTGAACTGGATCATGGAGTGGCTGCTGTG
GGATATGGATCATCAAAGGGGTTGGATTACATCATTGTGAAGAACTCATGGGGACCAAAA
TGGGGTGAGAAAGGGTACATAAGGATGAAGAGAAATACAGGAAAAACTGAAGGGCTCTGT
GGTATCAACAAAATGGCTTCTTACCCTACCAAAGATAACTGATCAATCGTTCTGGGCTTC
CCTGCTAAACATAAATGTCATCATTCATTTTACCTATGTTAACCCTTTATATTTCTCCTG
CTGTTTTTTCTTTTTCCTTTTTGTTTTTCATTGGATTGGTGAAGCTTAATTGTGTAAGCT
ACTGATGTTCATCAATAAAATTATGGAATTTCCAGAC