Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03970.t01
CDS Infomation

cds chromosome:12X:3:2896487:2898310:-1 gene:VIT_03s0038g03970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGTTTCTGCCAGTAACATCATCTATTACAACAGAAGAACTTTGAGACCTCCAACT
CTCTCTTTCTCAAAGCTTCAAATCCATTCCAAATTCACCACCCTTGGATTCCCATCTCTC
TTTCAGCACCCCCATCACTCTTATTCTCCAACTTCCATCTCTCTCTCTGCCTCCCCAGTT
GCCAAGGCTGCCTCAAGTTTTGTTGAAGTAGGTGACTATAAGAATAGCTTTGATTCCACT
GCCACCACCAGCTCATGGCCTGAATTTGCAAGAAATGTGTCTGGTGAGTGGGATGGATAT
GGAGCAGATTTCTCAAGTGAAGGGAAACCTATAGAACTTCCTGAGTTTGTTGTGCCTGAA
GCTTACAGGGAGTGGGAAGTTAAGGTGTTTGATTGGCAGACTCAATGCCCAACTCTTGCT
GAACCAGAGGACCATACTGTTGCATACAAATTGATAAAGCTACTCCCCACTGTGGGATGT
GAGGCTGATGCTGCAACAAGGTATAGCATTGATGAGAGGAACATTGGAGGTTCTCATAAC
AGCCTTGCAGCCTTTGCATATCAGTCTACTGGATGCTATGTTGCTCTATGGCCAATGGAG
GATGGCTTATTTGAGTTGGAGCATTGTTTGATTGATCCTCAAAATAAGGAGTCAAGGGTG
AGGATTATTCAGGTCCTTCTTTTAGATAACAGAAGGATGGTGCTTCAGAATATTCAAGTT
TTTTGTGAGCAGTGGTATGGCCCCTTCAGGAATGGGGAGCAGCTGGGTGGTTGTGCCATC
CGCGATTCTGCATTTGCTTCTACAGATGCCATGAAAAGTTCAGAAGTTGTAGGTGTCTGG
CAGGCCTCTAGTTCTGTTACCAGCTTCCATAGTTCTCAGACTAATGTCTTTCAAGAACTT
GTAGAAGGCATTACACAGAAGTCAGCCAGGGATGGAGACGATCTCATATTACTCCCAAAG
CAATTGTGGTGTTCAGTAAGCGAAAGAGAAGATGGAGACACTTGTTGCGAGGTAGGATGG
CTGTTAGATCGTGGTCATGCTATGACATCAAGATGCATCTTCTCAAAGGATGCAAACTTA
AAGGAAATTACAGTAGCAAGGGAAAGCTTAGCTGTGGAGGGTGCATAG

Peptide Sequence

PEP ID

VIT_03s0038g03970.t01
PEP Infomation

pep chromosome:12X:3:2896487:2898310:-1 gene:VIT_03s0038g03970 transcript:VIT_03s0038g03970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVSASNIIYYNRRTLRPPTLSFSKLQIHSKFTTLGFPSLFQHPHHSYSPTSISLSASPV
AKAASSFVEVGDYKNSFDSTATTSSWPEFARNVSGEWDGYGADFSSEGKPIELPEFVVPE
AYREWEVKVFDWQTQCPTLAEPEDHTVAYKLIKLLPTVGCEADAATRYSIDERNIGGSHN
SLAAFAYQSTGCYVALWPMEDGLFELEHCLIDPQNKESRVRIIQVLLLDNRRMVLQNIQV
FCEQWYGPFRNGEQLGGCAIRDSAFASTDAMKSSEVVGVWQASSSVTSFHSSQTNVFQEL
VEGITQKSARDGDDLILLPKQLWCSVSEREDGDTCCEVGWLLDRGHAMTSRCIFSKDANL
KEITVARESLAVEGA

Transcript Sequence

Transcript ID

VIT_03s0038g03970.t01
Transcript Infomation

cdna chromosome:12X:3:2896487:2898310:-1 gene:VIT_03s0038g03970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGATAAGAGTGGGAGTGGACAGAGGGAGAGAGAGCAGCAATGGCAGTTTCTGCCAGTA
ACATCATCTATTACAACAGAAGAACTTTGAGACCTCCAACTCTCTCTTTCTCAAAGCTTC
AAATCCATTCCAAATTCACCACCCTTGGATTCCCATCTCTCTTTCAGCACCCCCATCACT
CTTATTCTCCAACTTCCATCTCTCTCTCTGCCTCCCCAGTTGCCAAGGCTGCCTCAAGTT
TTGTTGAAGTAGGTGACTATAAGAATAGCTTTGATTCCACTGCCACCACCAGCTCATGGC
CTGAATTTGCAAGAAATGTGTCTGGTGAGTGGGATGGATATGGAGCAGATTTCTCAAGTG
AAGGGAAACCTATAGAACTTCCTGAGTTTGTTGTGCCTGAAGCTTACAGGGAGTGGGAAG
TTAAGGTGTTTGATTGGCAGACTCAATGCCCAACTCTTGCTGAACCAGAGGACCATACTG
TTGCATACAAATTGATAAAGCTACTCCCCACTGTGGGATGTGAGGCTGATGCTGCAACAA
GGTATAGCATTGATGAGAGGAACATTGGAGGTTCTCATAACAGCCTTGCAGCCTTTGCAT
ATCAGTCTACTGGATGCTATGTTGCTCTATGGCCAATGGAGGATGGCTTATTTGAGTTGG
AGCATTGTTTGATTGATCCTCAAAATAAGGAGTCAAGGGTGAGGATTATTCAGGTCCTTC
TTTTAGATAACAGAAGGATGGTGCTTCAGAATATTCAAGTTTTTTGTGAGCAGTGGTATG
GCCCCTTCAGGAATGGGGAGCAGCTGGGTGGTTGTGCCATCCGCGATTCTGCATTTGCTT
CTACAGATGCCATGAAAAGTTCAGAAGTTGTAGGTGTCTGGCAGGCCTCTAGTTCTGTTA
CCAGCTTCCATAGTTCTCAGACTAATGTCTTTCAAGAACTTGTAGAAGGCATTACACAGA
AGTCAGCCAGGGATGGAGACGATCTCATATTACTCCCAAAGCAATTGTGGTGTTCAGTAA
GCGAAAGAGAAGATGGAGACACTTGTTGCGAGGTAGGATGGCTGTTAGATCGTGGTCATG
CTATGACATCAAGATGCATCTTCTCAAAGGATGCAAACTTAAAGGAAATTACAGTAGCAA
GGGAAAGCTTAGCTGTGGAGGGTGCATAGCCATTGATCATCATCACTCAAATCAGCTTCA
AGTGTTTACCAGTAGAAAGAAAACTTGTTATACTACAGCCCATTGAAATGAAAATGCATT
CTGTTTGGTTTAGTTTGTATTAGATTCTGCTGTGATATTTTCAACCCATAGTAATAATAG
CAAATGAGACTCTGTTTTGCTC