Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03860.t01
CDS Infomation

cds chromosome:12X:3:2822240:2823414:-1 gene:VIT_03s0038g03860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATTGTTCATTTTCATATGTTTCTTTCTAGTAAGTGCAAGCCTTCCTCTTCCTTAC
TCCGGTGCTGCCGTGGAAACTAATGATTTCCAGCCGGAGGTGTATAACCCAAAGCTTCCG
CCGAGGGCTCTCACTTCTTCCAAGAAGTTTGAGGGTTCGTCGGACTTGGTGCGTCTCCGG
TATCATATGGGTCCGGTGCTGTCATCTCCGATCAATATATATATAATCTGGTACGGCAAG
TGGGCGCAGCCGCAGAAGCTTTTGATTAAAGATTTTCTCTTGTCGATCTCTGCGTCGCAC
CGAGCTGCCGCCTCCCCCTCCGTCGCGGAGTGGTGGCGCACGGTGTCTCTGTACACTGAC
CAGACCGGCGCCAACGTGTCGAGATCGGTGCTGATCGCCGGCGAGTACGCGGATCAGAGG
TACTCACACGGCGCGCAGCTCACGCGCCTCTCGATCCAGCAGGTGATTGCTAGCGCGGTC
CGCGCCGCGCCGTTCCCGGTGGACCACAAGAACGGAATCTACCTGATTCTGACCTCCGAG
GACGTCGCCGTGCAGGATTTCTGCCGCGCCGTCTGCGGCTTCCACTACTTCACCTTCCCG
TCGATGGTCGGCTACACGCTCCCGTACGCCTGGGTGGGGAACTCCGGGAAGCAGTGCCCC
GATGTTTGCGCGTACCCCTTCGCCGTGCCGGCGTACATGACAGGAGGCGGCCCGTCCGCC
CTGTCCCCGCCGAACAGGGACGTTGGCGTCGACGGCATGATCAGCGTGATCGGACACGAG
CTGGCGGAGCTGTCATCGAACCCGCTGGTGAACGCGTGGTACGCCGGAGAAGACCCCACG
GCCCCGACGGAGATCGGCGATCTGTGTGAGGGGCTGTACGGAACAGGTGGTGGAGGAGGG
TATATCGGTCAAGTGATGAGGGACAGAGAGGGAAGAACATTTAATTTGAATGGAAGGAGA
AAGAGAAAGTTCTTGGTACAGTGGATATGGAGTCCCGCCCTCAAAGCCTGTGCTGGTCCA
AATGCCTTGGACTAA

Peptide Sequence

PEP ID

VIT_03s0038g03860.t01
PEP Infomation

pep chromosome:12X:3:2822240:2823414:-1 gene:VIT_03s0038g03860 transcript:VIT_03s0038g03860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALFIFICFFLVSASLPLPYSGAAVETNDFQPEVYNPKLPPRALTSSKKFEGSSDLVRLR
YHMGPVLSSPINIYIIWYGKWAQPQKLLIKDFLLSISASHRAAASPSVAEWWRTVSLYTD
QTGANVSRSVLIAGEYADQRYSHGAQLTRLSIQQVIASAVRAAPFPVDHKNGIYLILTSE
DVAVQDFCRAVCGFHYFTFPSMVGYTLPYAWVGNSGKQCPDVCAYPFAVPAYMTGGGPSA
LSPPNRDVGVDGMISVIGHELAELSSNPLVNAWYAGEDPTAPTEIGDLCEGLYGTGGGGG
YIGQVMRDREGRTFNLNGRRKRKFLVQWIWSPALKACAGPNALD

Transcript Sequence

Transcript ID

VIT_03s0038g03860.t01
Transcript Infomation

cdna chromosome:12X:3:2822240:2823414:-1 gene:VIT_03s0038g03860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCTTGCAGTTGCAGCAATGGCATTGTTCATTTTCATATGTTTCTTTCTAGTAAGTGCAAG
CCTTCCTCTTCCTTACTCCGGTGCTGCCGTGGAAACTAATGATTTCCAGCCGGAGGTGTA
TAACCCAAAGCTTCCGCCGAGGGCTCTCACTTCTTCCAAGAAGTTTGAGGGTTCGTCGGA
CTTGGTGCGTCTCCGGTATCATATGGGTCCGGTGCTGTCATCTCCGATCAATATATATAT
AATCTGGTACGGCAAGTGGGCGCAGCCGCAGAAGCTTTTGATTAAAGATTTTCTCTTGTC
GATCTCTGCGTCGCACCGAGCTGCCGCCTCCCCCTCCGTCGCGGAGTGGTGGCGCACGGT
GTCTCTGTACACTGACCAGACCGGCGCCAACGTGTCGAGATCGGTGCTGATCGCCGGCGA
GTACGCGGATCAGAGGTACTCACACGGCGCGCAGCTCACGCGCCTCTCGATCCAGCAGGT
GATTGCTAGCGCGGTCCGCGCCGCGCCGTTCCCGGTGGACCACAAGAACGGAATCTACCT
GATTCTGACCTCCGAGGACGTCGCCGTGCAGGATTTCTGCCGCGCCGTCTGCGGCTTCCA
CTACTTCACCTTCCCGTCGATGGTCGGCTACACGCTCCCGTACGCCTGGGTGGGGAACTC
CGGGAAGCAGTGCCCCGATGTTTGCGCGTACCCCTTCGCCGTGCCGGCGTACATGACAGG
AGGCGGCCCGTCCGCCCTGTCCCCGCCGAACAGGGACGTTGGCGTCGACGGCATGATCAG
CGTGATCGGACACGAGCTGGCGGAGCTGTCATCGAACCCGCTGGTGAACGCGTGGTACGC
CGGAGAAGACCCCACGGCCCCGACGGAGATCGGCGATCTGTGTGAGGGGCTGTACGGAAC
AGGTGGTGGAGGAGGGTATATCGGTCAAGTGATGAGGGACAGAGAGGGAAGAACATTTAA
TTTGAATGGAAGGAGAAAGAGAAAGTTCTTGGTACAGTGGATATGGAGTCCCGCCCTCAA
AGCCTGTGCTGGTCCAAATGCCTTGGACTAATCAATTTTTGTTTTTATTATTGTTTTTGT
TTTTTTCGAGTAATATTTTTATTAGCTTTAGTCTCATAGATGTATAAAATGTGGGTAATA
TTATATATATTTTTTTATGAAATTTTAATTTCTTG