Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03620.t01
CDS Infomation

cds chromosome:12X:3:2604327:2609233:1 gene:VIT_03s0038g03620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAGTGTTTCATCGGAGGAGGGAGTGGATGATCAGAGCGATCGGTGCGGGAGCTAC
AGTCTGAGTGCGGATGTTAGCGAGTCGGAGAGTTGTAGTAGTTTCTCGTGTCGGCGGTAC
GATGGTGAGGGTGCTTCGAGCTCCATGACGTCTTCGCCGCTGGCTTGCCGGCCGGTGGTA
GGGAATTCAAGTTTTCCTGTGGGGCCGCCGCTGATGCTGCCGGTGATTGGGGGGAGAGAT
GTGGTGGTTTGGGGGGAGAAGCCGGAGAAGCGTGAGACGGATTTGTCAGAAGCTGAGATG
ATGAAGGAGAGATTTGCTAAGCTTCTACTTGGGGAAGATATGTCTGGAGGAGGGAAAGGG
GTTTGTACTGCCCTTGCCATCTCAAACGCCATCACAAATCTCTCTGCTACCGTGTTTGGA
GAACTATGGAGGTTGGAGCCATTGGCACCACAGAAGAAGGCAATGTGGTGCAGGGAGATG
GAATGGCTGTTATGTGTGAGTGATTCAATAGTTGAGCTTGTACCTTCTATACAACAATTC
CCAGGTGGGGGGACATATGAAGTCATGGCTACACGGCCTCGATCGGATTTATACATGAAT
CTTCCTGCCCTTAAGAAGCTTGATGCCATGTTGCTTAGCATGCTTGATGGGTTTTGTGAA
ACGGAGTTCTGGTATGTTGATCGGGGAATAATTGTGGCTGAGGCTGACAATCATGACGCA
TACCCATTGTCTGCTTCTAGCGGGAGACCCTCAATTAGGCAGGAAGAGAAATGGTGGCTA
CCCTGCCCAAAAGTTCCCCCAAATGGGTTGTCTGAGGATGCAAGGAAGAGGCTGCAGCAA
TGCAGGGACTGTACGAACCAGATACTGAAGGCAGCCATGGCGATTAATAGCAGTGTGCTT
GCTGAAATGGAGATACCCACTGCCTACTTGGAGACCTTGCCTAAGAATGGGAAAGCATGT
CTGGGTGATATCATCTATCGCTACATCACTGCTGAACAGTTCTCCCCAGAATGTCTCCTT
GATTGCCTGGACCTATCATCAGAACATCATACTTTGGAAATAGCCAACAGGATTGAGGCG
GCAGTGCATGTTTGGAAACAGAAAGACTGGAAAAAACAACCAAAACACTTGAAAGCTAAG
CGTTCAACATGGGGAGGCAAGGTCAAGGGCCTTGTTGCTGACACAGAAAAGAATCAATTT
CTGGCCATACGAGCTGAGACCCTTCTACACAGTCTGAGGCTTCGTTTCCCTGGCCTTCCC
CAGACTGCTTTAGACATGAACAAGATTCAGTACAATAAGGATGTAGGGCAGTCAATTCTA
GAAAGTTATTCAAGGGTAATGGAGAGCTTAGCTTTCAACATAATGGCAAGGATAGATGAT
GTTCTTTATGTAGATGATGCAGTAAAGCGATGTGCAGCAGCAGAATCAATGGCCCTTTTC
GGCAGGGGAGGTTTGGGTGGTCTTCCTATCCAGAAACGGATGTCCCCTAGCCCTTTCTCA
ATCCAACATTCCCCTTTTGCCTCTCCATTTGCTACTCCAACCTTCTGCTCTTCCACACCT
CTGACTGGAAGCCCAGGCAGGACACCCCCCTCAAGAAATAAGATGAGCTCCAAGGGGGCA
CCAGAGCTGAAGCTGGAAAAACCAATCCCAGCACCAGAGATGAAGCTGGAAAAACCAATC
CCAGCTGATTTCGAGAAGATGTGGTCATATACTGGGAACCTTAGTGCCAGAAAAGTTTCT
GGAGACGCTCCAGAACGTGATTGA

Peptide Sequence

PEP ID

VIT_03s0038g03620.t01
PEP Infomation

pep chromosome:12X:3:2604327:2609233:1 gene:VIT_03s0038g03620 transcript:VIT_03s0038g03620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSVSSEEGVDDQSDRCGSYSLSADVSESESCSSFSCRRYDGEGASSSMTSSPLACRPVV
GNSSFPVGPPLMLPVIGGRDVVVWGEKPEKRETDLSEAEMMKERFAKLLLGEDMSGGGKG
VCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWCREMEWLLCVSDSIVELVPSIQQF
PGGGTYEVMATRPRSDLYMNLPALKKLDAMLLSMLDGFCETEFWYVDRGIIVAEADNHDA
YPLSASSGRPSIRQEEKWWLPCPKVPPNGLSEDARKRLQQCRDCTNQILKAAMAINSSVL
AEMEIPTAYLETLPKNGKACLGDIIYRYITAEQFSPECLLDCLDLSSEHHTLEIANRIEA
AVHVWKQKDWKKQPKHLKAKRSTWGGKVKGLVADTEKNQFLAIRAETLLHSLRLRFPGLP
QTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDAVKRCAAAESMALF
GRGGLGGLPIQKRMSPSPFSIQHSPFASPFATPTFCSSTPLTGSPGRTPPSRNKMSSKGA
PELKLEKPIPAPEMKLEKPIPADFEKMWSYTGNLSARKVSGDAPERD

Transcript Sequence

Transcript ID

VIT_03s0038g03620.t01
Transcript Infomation

cdna chromosome:12X:3:2604327:2609233:1 gene:VIT_03s0038g03620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAACGGCGTCACTTTACCTTTTCCTTTTTCCGCCATCGCCACTTCTTCCTGCGTCTGGAG
GGACTGAAAGAGTACGTTGGGAGGAAGCCCACCACCTCCTTTTTTTTAACTTCATCTACT
TTTGCTTTTTCTACCGTTGCTTCTCTTGAACCAGTCTCATGAGTTCTCCCTGATGTCATT
GCAAAAACTATAACCCACTCTCTTGAATTCTCTGCTCAAAAAGTATCTGAATGGGGAGTG
TTTCATCGGAGGAGGGAGTGGATGATCAGAGCGATCGGTGCGGGAGCTACAGTCTGAGTG
CGGATGTTAGCGAGTCGGAGAGTTGTAGTAGTTTCTCGTGTCGGCGGTACGATGGTGAGG
GTGCTTCGAGCTCCATGACGTCTTCGCCGCTGGCTTGCCGGCCGGTGGTAGGGAATTCAA
GTTTTCCTGTGGGGCCGCCGCTGATGCTGCCGGTGATTGGGGGGAGAGATGTGGTGGTTT
GGGGGGAGAAGCCGGAGAAGCGTGAGACGGATTTGTCAGAAGCTGAGATGATGAAGGAGA
GATTTGCTAAGCTTCTACTTGGGGAAGATATGTCTGGAGGAGGGAAAGGGGTTTGTACTG
CCCTTGCCATCTCAAACGCCATCACAAATCTCTCTGCTACCGTGTTTGGAGAACTATGGA
GGTTGGAGCCATTGGCACCACAGAAGAAGGCAATGTGGTGCAGGGAGATGGAATGGCTGT
TATGTGTGAGTGATTCAATAGTTGAGCTTGTACCTTCTATACAACAATTCCCAGGTGGGG
GGACATATGAAGTCATGGCTACACGGCCTCGATCGGATTTATACATGAATCTTCCTGCCC
TTAAGAAGCTTGATGCCATGTTGCTTAGCATGCTTGATGGGTTTTGTGAAACGGAGTTCT
GGTATGTTGATCGGGGAATAATTGTGGCTGAGGCTGACAATCATGACGCATACCCATTGT
CTGCTTCTAGCGGGAGACCCTCAATTAGGCAGGAAGAGAAATGGTGGCTACCCTGCCCAA
AAGTTCCCCCAAATGGGTTGTCTGAGGATGCAAGGAAGAGGCTGCAGCAATGCAGGGACT
GTACGAACCAGATACTGAAGGCAGCCATGGCGATTAATAGCAGTGTGCTTGCTGAAATGG
AGATACCCACTGCCTACTTGGAGACCTTGCCTAAGAATGGGAAAGCATGTCTGGGTGATA
TCATCTATCGCTACATCACTGCTGAACAGTTCTCCCCAGAATGTCTCCTTGATTGCCTGG
ACCTATCATCAGAACATCATACTTTGGAAATAGCCAACAGGATTGAGGCGGCAGTGCATG
TTTGGAAACAGAAAGACTGGAAAAAACAACCAAAACACTTGAAAGCTAAGCGTTCAACAT
GGGGAGGCAAGGTCAAGGGCCTTGTTGCTGACACAGAAAAGAATCAATTTCTGGCCATAC
GAGCTGAGACCCTTCTACACAGTCTGAGGCTTCGTTTCCCTGGCCTTCCCCAGACTGCTT
TAGACATGAACAAGATTCAGTACAATAAGGATGTAGGGCAGTCAATTCTAGAAAGTTATT
CAAGGGTAATGGAGAGCTTAGCTTTCAACATAATGGCAAGGATAGATGATGTTCTTTATG
TAGATGATGCAGTAAAGCGATGTGCAGCAGCAGAATCAATGGCCCTTTTCGGCAGGGGAG
GTTTGGGTGGTCTTCCTATCCAGAAACGGATGTCCCCTAGCCCTTTCTCAATCCAACATT
CCCCTTTTGCCTCTCCATTTGCTACTCCAACCTTCTGCTCTTCCACACCTCTGACTGGAA
GCCCAGGCAGGACACCCCCCTCAAGAAATAAGATGAGCTCCAAGGGGGCACCAGAGCTGA
AGCTGGAAAAACCAATCCCAGCACCAGAGATGAAGCTGGAAAAACCAATCCCAGCTGATT
TCGAGAAGATGTGGTCATATACTGGGAACCTTAGTGCCAGAAAAGTTTCTGGAGACGCTC
CAGAACGTGATTGAGTTCAAGCTAATCCATGAAACTACCAAAGAAAAAGCTCGGAGAGGC
CTGTGGCCATGGGTAGAAGGTTGGTGGTTCTGATTTTTGTATATTCTTTAGCAATAGAAA
TCAGGCTTTAGAGTTTTGATAGTCTCTGTATCAGATGCTAGATGAAGAGAGTTATGCTTT
CCTTAATACTCTGTTGTTCATAAAAAATCATTCCCTAGTGTCTCCTTTCAAAATTGGCCA
ATCTAGTGCCCTAGCTGGATGTAATGTATCATTGCTATCTACCACGACTATTCAAATTAT
TCAAAAAAGTTTCACTTCT