Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03560.t01
CDS Infomation

cds chromosome:12X:3:2574666:2576021:-1 gene:VIT_03s0038g03560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGCTCTCTTCGTGAATACTTCTCTCTCTCGCCTCAAACTCTCCCCCAAACCCACT
TCTCTCTCCCCTCTCCCCTCCCTCCCTCTCCACTCTCTCCACCTCCGACCCGCCCGTCGA
TTCAACCTCACAGTCTCTCAGAAGCAGTTTGAGGAAACAGAGGAGGTGTTGAAAGATGAA
GTGTTCGACAGCTACAATGAGGATGAGTCGTACGGGGAGGTCAACAAGATCATCGGCAGC
AGAGCGGCGGAGGGCGGGAAAGGGATGGAGTATTTGATCGAGTGGAAGGACGGCCACGTC
CCGACGTGGGTCCCCGCACGTTACGTCGCCGGGGACGTGGTGGCGGAGTACGAAAGCCCC
TGGTGGACCGCGGCGAAGAAGGCCGACGACGCCGCGCTGAAGGCCCTGTTGGAATCCGGC
GACGGCCGCGACGTCGACGCCGTCGACGAGAATGGCCGGACCGCGCTCCTCTTCGCTGCG
GGCCTGGGGTCGGAGGCGTGTGTCCAAATCCTCGCCGACGCCGGCGCGGACTTGAACCAC
CGCGACAACGGCGGCGGCGGCTTGACGGCCCTCCACATGGCTGCTGGGTACGTGAAGCCC
GGCGTGGCTCGGCTCCTCATCCAGCTGGGCGCGGATCCAGAGGCGGAAGACGACAGGGGA
CGTACGCCGTTGGATCTTGCAAGAGAGATGCTGAGAGCAACACCCAAGGGAAACCCGATG
CAGTTTGCGAGAAGGCTTGGGCTCGAGAATGTGGTGAGAGTTCTGGAAGAGGCAATATTC
GAGTACGCGGAGGTGCAGGAGATTATGGAGAGGAGAGGGAAGGGTCAAAATCTGGAGTAC
TTAGTCAAATGGAAGGACGGTAGTGATAACGAGTGGGTCAAAGCTGGGTTGATTGCAGAG
GAACTGGTGAGGGACTTCGAGGCCGGGCTAGAATACGCTGTGGCGCAGGGAGTAATGGGG
AAAAGGACTGGAGATGATGGGAATATGGAGTACTTAGTGAAATGGACGGATATAGATGAG
GCCACGTGGGAGCCTGAGGAGAACGTTGACCCTGATTTGATCAAGGCGTTTGAGGAAAAT
GGGGCCGCTGATCTAGGGGCCCATGTTGAAGGTGGGTCATGA

Peptide Sequence

PEP ID

VIT_03s0038g03560.t01
PEP Infomation

pep chromosome:12X:3:2574666:2576021:-1 gene:VIT_03s0038g03560 transcript:VIT_03s0038g03560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDALFVNTSLSRLKLSPKPTSLSPLPSLPLHSLHLRPARRFNLTVSQKQFEETEEVLKDE
VFDSYNEDESYGEVNKIIGSRAAEGGKGMEYLIEWKDGHVPTWVPARYVAGDVVAEYESP
WWTAAKKADDAALKALLESGDGRDVDAVDENGRTALLFAAGLGSEACVQILADAGADLNH
RDNGGGGLTALHMAAGYVKPGVARLLIQLGADPEAEDDRGRTPLDLAREMLRATPKGNPM
QFARRLGLENVVRVLEEAIFEYAEVQEIMERRGKGQNLEYLVKWKDGSDNEWVKAGLIAE
ELVRDFEAGLEYAVAQGVMGKRTGDDGNMEYLVKWTDIDEATWEPEENVDPDLIKAFEEN
GAADLGAHVEGGS

Transcript Sequence

Transcript ID

VIT_03s0038g03560.t01
Transcript Infomation

cdna chromosome:12X:3:2574666:2576021:-1 gene:VIT_03s0038g03560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCTCCACCGCCACTCGATGGATGCTCTCTTCGTGAATACTTCTCTCTCTCGCCTCAAAC
TCTCCCCCAAACCCACTTCTCTCTCCCCTCTCCCCTCCCTCCCTCTCCACTCTCTCCACC
TCCGACCCGCCCGTCGATTCAACCTCACAGTCTCTCAGAAGCAGTTTGAGGAAACAGAGG
AGGTGTTGAAAGATGAAGTGTTCGACAGCTACAATGAGGATGAGTCGTACGGGGAGGTCA
ACAAGATCATCGGCAGCAGAGCGGCGGAGGGCGGGAAAGGGATGGAGTATTTGATCGAGT
GGAAGGACGGCCACGTCCCGACGTGGGTCCCCGCACGTTACGTCGCCGGGGACGTGGTGG
CGGAGTACGAAAGCCCCTGGTGGACCGCGGCGAAGAAGGCCGACGACGCCGCGCTGAAGG
CCCTGTTGGAATCCGGCGACGGCCGCGACGTCGACGCCGTCGACGAGAATGGCCGGACCG
CGCTCCTCTTCGCTGCGGGCCTGGGGTCGGAGGCGTGTGTCCAAATCCTCGCCGACGCCG
GCGCGGACTTGAACCACCGCGACAACGGCGGCGGCGGCTTGACGGCCCTCCACATGGCTG
CTGGGTACGTGAAGCCCGGCGTGGCTCGGCTCCTCATCCAGCTGGGCGCGGATCCAGAGG
CGGAAGACGACAGGGGACGTACGCCGTTGGATCTTGCAAGAGAGATGCTGAGAGCAACAC
CCAAGGGAAACCCGATGCAGTTTGCGAGAAGGCTTGGGCTCGAGAATGTGGTGAGAGTTC
TGGAAGAGGCAATATTCGAGTACGCGGAGGTGCAGGAGATTATGGAGAGGAGAGGGAAGG
GTCAAAATCTGGAGTACTTAGTCAAATGGAAGGACGGTAGTGATAACGAGTGGGTCAAAG
CTGGGTTGATTGCAGAGGAACTGGTGAGGGACTTCGAGGCCGGGCTAGAATACGCTGTGG
CGCAGGGAGTAATGGGGAAAAGGACTGGAGATGATGGGAATATGGAGTACTTAGTGAAAT
GGACGGATATAGATGAGGCCACGTGGGAGCCTGAGGAGAACGTTGACCCTGATTTGATCA
AGGCGTTTGAGGAAAATGGGGCCGCTGATCTAGGGGCCCATGTTGAAGGTGGGTCATGAT
TTCAGTTGGGTGGGGCCTCTATTGTTCCTATATCTCAATGTAAAAGGTTTTGGAAGTTGA
TTTACAATAAGTTTTCATGTCTTAAATTTTCATATTGTAATTACAAGATTTGTGGTGAAA
AGGGATGAGAGAAGAGAGAGAGAGTGATTGAAGGAATGCCTTCAATCATACCTTTCTGTA
ATTACAAGATTTGTGGTGAATGCACGTGGGTCCCAT