Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03540.t01
CDS Infomation

cds chromosome:12X:3:2549517:2565569:1 gene:VIT_03s0038g03540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGATGGACATTATTACATAAAGAAAGATTTGAGATTTATAATTTCAAATAAATCA
AATTCATTTTCAATGTATGATAATGTTGGAGCAATCATAGTGGAAGAAGACATGGGAGAG
GTGATGGTGGAAGAGTATCCATTTGTCCATGTGGTTACCACCGTGCCCAGCCCCATTCAG
GAGGTGGTGCCAAAACCACAGGAGGATTGGCTCCCGGTCTCCGACTCCAGGAAGGAGGTG
CCAAGCCCACAAGAAGGATGGCTCCCTATCACCGAGTCCAGAAAGGGCGGCGCCTTTACC
TCTGCATTTCATTTGCTGGCCTCAGGGATAGGGATTCAGGCTTTTTTGCTTCCCGTAGCT
TTTTCTAAGTTGGGATGGTTCTGGGGAATAGCATGTTTGTTGTTGGCATTTGCGTGGCAG
CTCTACACCAAGTGGCTTCTTGTGCAGCTTCATGAACCAGGTCCTGGAACCCGGTACAGC
AGATACCTTCATCTCTCAGTTGTGGCCTTTGGTCCAAAGCTGGGGAAGTTGCTTGCTCTG
TTCCCAGTGATGTATCTCTCTGGGGGTACCTGTGTGATGCTGATCAACTATGGGGGCGGT
AGCATGGAGCTTCTCTTCAGAACTGTGTGTGGGGATTCTTCATGCATTGCCAATAAACTA
ACTGGGGCCGAGTGGTTCATGGTGTTCACTTGCTTGGCAATCATCGTGGCTCAGCTCCCC
AACTTGAACTCGATGGCTGGTGTCTCACTCCTCGGCGCAGCCACTGCCATCAGTTACTGT
ACTTTCCTTTGGATTCTATCCATCACCAAGGGCAGGCCAGCTGGTGTGTCATACAGCCCA
CCAGAGGCAGAATCAAGGATGGCAAGAATTGGGGAAGTCTTGACTGCAATTGGGATGATT
GCTCTTGCATTTAGAGGTCACAATGTTGTCCTTGAGATACAGGGGACAATGCCTTCAAAT
CCAAAACATCCATCACAAGAGCCAATGTGGAGAGGAGTGATTGTTTCATGTTCCATAACC
GCTGCATGTTTGTTTCCACTGGCAATAGCCGGATACTGGGCTTATGGAAACAGGATACCT
GCAAATGGAGGGTTGTTAAGTGCATTTTCAGAGTTCCATGGACAAAACACCAAAAAGCTA
GTGATGAGGATGATATACCTGCTGATAGTGGTGAACAGCTTGTGTTCATACCAAATCTAT
GCCATGCCAGTTTTCGACAACTTGGAGTTCAGGTACATCAGCAAGAAGAATAAGCCATGC
TCACGTTGGGTCCGTGCAGCAATCAGGGTGTTCTTTGGTGGACTGACAACTTTCATAGCA
GTAGCAGTTTCATTCTTGGGAAGCTTAGGTCCTCTAATTGGAGGGATCGCATTGCCTCTG
ACACTTGCTTATCCATGTTTCATGTGGATCGCCATCAAGAAACCCCGTCAGTATGGTGCC
ATGTGGTATCTCAATTTGGGACTTGGCTGTTCAGGCATTATACTCAGTGTCCTGTTAGTT
GCTGCAGCAGTATGGAAGATAGTGGACAAAGGCATAGATGCCAGTTTCTTCAACACTCAC
TTATCACCTCTATTGAAGCCCCCACAGTCATAA

Peptide Sequence

PEP ID

VIT_03s0038g03540.t01
PEP Infomation

pep chromosome:12X:3:2549517:2565569:1 gene:VIT_03s0038g03540 transcript:VIT_03s0038g03540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADGHYYIKKDLRFIISNKSNSFSMYDNVGAIIVEEDMGEVMVEEYPFVHVVTTVPSPIQ
EVVPKPQEDWLPVSDSRKEVPSPQEGWLPITESRKGGAFTSAFHLLASGIGIQAFLLPVA
FSKLGWFWGIACLLLAFAWQLYTKWLLVQLHEPGPGTRYSRYLHLSVVAFGPKLGKLLAL
FPVMYLSGGTCVMLINYGGGSMELLFRTVCGDSSCIANKLTGAEWFMVFTCLAIIVAQLP
NLNSMAGVSLLGAATAISYCTFLWILSITKGRPAGVSYSPPEAESRMARIGEVLTAIGMI
ALAFRGHNVVLEIQGTMPSNPKHPSQEPMWRGVIVSCSITAACLFPLAIAGYWAYGNRIP
ANGGLLSAFSEFHGQNTKKLVMRMIYLLIVVNSLCSYQIYAMPVFDNLEFRYISKKNKPC
SRWVRAAIRVFFGGLTTFIAVAVSFLGSLGPLIGGIALPLTLAYPCFMWIAIKKPRQYGA
MWYLNLGLGCSGIILSVLLVAAAVWKIVDKGIDASFFNTHLSPLLKPPQS

Transcript Sequence

Transcript ID

VIT_03s0038g03540.t01
Transcript Infomation

cdna chromosome:12X:3:2549517:2565569:1 gene:VIT_03s0038g03540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGATGGACATTATTACATAAAGAAAGATTTGAGATTTATAATTTCAAATAAATCA
AATTCATTTTCAATGTATGATAATGTTGGAGCAATCATAGTGGAAGAAGACATGGGAGAG
GTGATGGTGGAAGAGTATCCATTTGTCCATGTGGTTACCACCGTGCCCAGCCCCATTCAG
GAGGTGGTGCCAAAACCACAGGAGGATTGGCTCCCGGTCTCCGACTCCAGGAAGGAGGTG
CCAAGCCCACAAGAAGGATGGCTCCCTATCACCGAGTCCAGAAAGGGCGGCGCCTTTACC
TCTGCATTTCATTTGCTGGCCTCAGGGATAGGGATTCAGGCTTTTTTGCTTCCCGTAGCT
TTTTCTAAGTTGGGATGGTTCTGGGGAATAGCATGTTTGTTGTTGGCATTTGCGTGGCAG
CTCTACACCAAGTGGCTTCTTGTGCAGCTTCATGAACCAGGTCCTGGAACCCGGTACAGC
AGATACCTTCATCTCTCAGTTGTGGCCTTTGGTCCAAAGCTGGGGAAGTTGCTTGCTCTG
TTCCCAGTGATGTATCTCTCTGGGGGTACCTGTGTGATGCTGATCAACTATGGGGGCGGT
AGCATGGAGCTTCTCTTCAGAACTGTGTGTGGGGATTCTTCATGCATTGCCAATAAACTA
ACTGGGGCCGAGTGGTTCATGGTGTTCACTTGCTTGGCAATCATCGTGGCTCAGCTCCCC
AACTTGAACTCGATGGCTGGTGTCTCACTCCTCGGCGCAGCCACTGCCATCAGTTACTGT
ACTTTCCTTTGGATTCTATCCATCACCAAGGGCAGGCCAGCTGGTGTGTCATACAGCCCA
CCAGAGGCAGAATCAAGGATGGCAAGAATTGGGGAAGTCTTGACTGCAATTGGGATGATT
GCTCTTGCATTTAGAGGTCACAATGTTGTCCTTGAGATACAGGGGACAATGCCTTCAAAT
CCAAAACATCCATCACAAGAGCCAATGTGGAGAGGAGTGATTGTTTCATGTTCCATAACC
GCTGCATGTTTGTTTCCACTGGCAATAGCCGGATACTGGGCTTATGGAAACAGGATACCT
GCAAATGGAGGGTTGTTAAGTGCATTTTCAGAGTTCCATGGACAAAACACCAAAAAGCTA
GTGATGAGGATGATATACCTGCTGATAGTGGTGAACAGCTTGTGTTCATACCAAATCTAT
GCCATGCCAGTTTTCGACAACTTGGAGTTCAGGTACATCAGCAAGAAGAATAAGCCATGC
TCACGTTGGGTCCGTGCAGCAATCAGGGTGTTCTTTGGTGGACTGACAACTTTCATAGCA
GTAGCAGTTTCATTCTTGGGAAGCTTAGGTCCTCTAATTGGAGGGATCGCATTGCCTCTG
ACACTTGCTTATCCATGTTTCATGTGGATCGCCATCAAGAAACCCCGTCAGTATGGTGCC
ATGTGGTATCTCAATTTGGGACTTGGCTGTTCAGGCATTATACTCAGTGTCCTGTTAGTT
GCTGCAGCAGTATGGAAGATAGTGGACAAAGGCATAGATGCCAGTTTCTTCAACACTCAC
TTATCACCTCTATTGAAGCCCCCACAGTCATAACACAGATGGAAAGCGCATACCTTGAGT
ACAGTTCTGGCTCTTACAATAA