Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03530.t01
CDS Infomation

cds chromosome:12X:3:2545417:2548989:1 gene:VIT_03s0038g03530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGATCACAGTGAAGTTAGCTCTGCTCCAATTACTCCTAGGCCGATGACACCAAGG
CAAGGGACACCGCCTATATCGGCTCCAATTACCCCTAGGCCAATGACACCAAGGCTAATG
ACACCGCCCATATCGGCTCCTCCGTCGCAGTTCCACTCTCCTTCCCTCTCCCGGTCACCG
CTGCTAATTTCCATCGGAGGAGACCAAGTGGAACCTGCAGGCAAAACACCCAAAACATCC
AAAACATCAACACCCAGAACATCCAGGACTCCGAATTTTAGGACTCCTATAATCAGAACC
CCTCGCTTCATTACTCCCTTGGGGAGCCCCATTAGGAAGGCGTTGCGCTTCACTAAGCTC
GACCCTCAAGATGCTTGGCTGCCCATCACTGAGTCAAGAAATGGAAATATATACTATGCT
GCCTTCCACACCCTCTCTTCTGGGATAATTGGAATTCAAGCCCTAGTCCTCCCTGTGGCC
TTCACTGTTCTTGGGTGGACATGGGGGACCATATGCTTGACAGCAGCATTCATATGGCAA
CTCTACACTCTATACTTACTTGTCCATCTCCATGAATCCCCCGAAACCGGCATGCGATTC
AGCCGATACCTTCAGCTCTTCAATGCAACTTTTGGTGAAAAGATGGGGAATATTTTTGCG
ATATTTCCGATAATGTATCTATCAGGAGGAACATGCGTTGCCCTAATCATCATGGGAGGC
TCAACAATGAAGCAGTTCTACCTGACAGTCTGCGGTGGCGCCGCCTGCTCGCCGAACCCA
CCAACAACTGCAGAGTGGTACTTGATATTCACATGTGCTGCAGTTGTGCTGTCCCAGCTG
CCCAACTTGAACTCCATCGCCGGTGTTTCGCTGATCGGCGCTATCACTGCAGTGACCTAT
TGTACCATGATATGGGTAGTGTCTGTGGCTGAGGGGAGGGTGTCTGGGGTTTCATACAAT
CCAGTTTCGTCCAGCTCAGAAATTGGTAGAATTTTTGATGTTTTGAATGCACTTGGGATC
ATTGCTTTTGCCTTCAGAGGCCACAACCTCATCCTTGAGATTCAGGCCACAATGCCATCT
GATGAGAAGCATCCATCACATGTGCCAATGTGGAAGGGTGTCAAGGTTTCATATACGATA
ATTGCATTGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGATA
CCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCATGACACATCTCAA
GTCATCTTAGGACTAACAAGCTTATTCGTCATAATTAACGCGGTAAGCGCTTTCCAAATC
TACGGCATGCCAACATTCGACGACATCGAGTCCAAGTACACCATGAGAAAGAAGAAGCCA
TGTCCAAAGTGGCTCAGGGCACTTATCCGGGCCTTGTTTGGATTTGGGTGCTACTTAATG
GCCGTGGCCTTACCATTCGTGAGCAAGCTGACTGGACTTCTTGGTGGCTTCGCCCTACCA
ATCACATTAGCCTATCCATGCTTCCTGTGGCTCAAGACCAAGAAACCAAAAATGTATAGC
CCAAGTTGGTTGATTAATTGGGGATTAGGGACATCAGGGATGGGGCTAAGCGTAATAGTA
ATCGTGGCCAGTATATATGTTCTGATTGATACTGGGATTCACGTTAGCTTCTTTAATCCT
TAG

Peptide Sequence

PEP ID

VIT_03s0038g03530.t01
PEP Infomation

pep chromosome:12X:3:2545417:2548989:1 gene:VIT_03s0038g03530 transcript:VIT_03s0038g03530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGDHSEVSSAPITPRPMTPRQGTPPISAPITPRPMTPRLMTPPISAPPSQFHSPSLSRSP
LLISIGGDQVEPAGKTPKTSKTSTPRTSRTPNFRTPIIRTPRFITPLGSPIRKALRFTKL
DPQDAWLPITESRNGNIYYAAFHTLSSGIIGIQALVLPVAFTVLGWTWGTICLTAAFIWQ
LYTLYLLVHLHESPETGMRFSRYLQLFNATFGEKMGNIFAIFPIMYLSGGTCVALIIMGG
STMKQFYLTVCGGAACSPNPPTTAEWYLIFTCAAVVLSQLPNLNSIAGVSLIGAITAVTY
CTMIWVVSVAEGRVSGVSYNPVSSSSEIGRIFDVLNALGIIAFAFRGHNLILEIQATMPS
DEKHPSHVPMWKGVKVSYTIIALCLYPLTIGGYWTYGQLIPSDGGVLAALFQYHGHDTSQ
VILGLTSLFVIINAVSAFQIYGMPTFDDIESKYTMRKKKPCPKWLRALIRALFGFGCYLM
AVALPFVSKLTGLLGGFALPITLAYPCFLWLKTKKPKMYSPSWLINWGLGTSGMGLSVIV
IVASIYVLIDTGIHVSFFNP

Transcript Sequence

Transcript ID

VIT_03s0038g03530.t01
Transcript Infomation

cdna chromosome:12X:3:2545417:2548989:1 gene:VIT_03s0038g03530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTGTGAGCAAAGCCAGAAGGAAGAGTTGATTACAAAGAGGGAGAGCTGATTGCATACAG
GCATCTATGAACATGGGTGATCACAGTGAAGTTAGCTCTGCTCCAATTACTCCTAGGCCG
ATGACACCAAGGCAAGGGACACCGCCTATATCGGCTCCAATTACCCCTAGGCCAATGACA
CCAAGGCTAATGACACCGCCCATATCGGCTCCTCCGTCGCAGTTCCACTCTCCTTCCCTC
TCCCGGTCACCGCTGCTAATTTCCATCGGAGGAGACCAAGTGGAACCTGCAGGCAAAACA
CCCAAAACATCCAAAACATCAACACCCAGAACATCCAGGACTCCGAATTTTAGGACTCCT
ATAATCAGAACCCCTCGCTTCATTACTCCCTTGGGGAGCCCCATTAGGAAGGCGTTGCGC
TTCACTAAGCTCGACCCTCAAGATGCTTGGCTGCCCATCACTGAGTCAAGAAATGGAAAT
ATATACTATGCTGCCTTCCACACCCTCTCTTCTGGGATAATTGGAATTCAAGCCCTAGTC
CTCCCTGTGGCCTTCACTGTTCTTGGGTGGACATGGGGGACCATATGCTTGACAGCAGCA
TTCATATGGCAACTCTACACTCTATACTTACTTGTCCATCTCCATGAATCCCCCGAAACC
GGCATGCGATTCAGCCGATACCTTCAGCTCTTCAATGCAACTTTTGGTGAAAAGATGGGG
AATATTTTTGCGATATTTCCGATAATGTATCTATCAGGAGGAACATGCGTTGCCCTAATC
ATCATGGGAGGCTCAACAATGAAGCAGTTCTACCTGACAGTCTGCGGTGGCGCCGCCTGC
TCGCCGAACCCACCAACAACTGCAGAGTGGTACTTGATATTCACATGTGCTGCAGTTGTG
CTGTCCCAGCTGCCCAACTTGAACTCCATCGCCGGTGTTTCGCTGATCGGCGCTATCACT
GCAGTGACCTATTGTACCATGATATGGGTAGTGTCTGTGGCTGAGGGGAGGGTGTCTGGG
GTTTCATACAATCCAGTTTCGTCCAGCTCAGAAATTGGTAGAATTTTTGATGTTTTGAAT
GCACTTGGGATCATTGCTTTTGCCTTCAGAGGCCACAACCTCATCCTTGAGATTCAGGCC
ACAATGCCATCTGATGAGAAGCATCCATCACATGTGCCAATGTGGAAGGGTGTCAAGGTT
TCATATACGATAATTGCATTGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATAT
GGTCAATTGATACCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCAT
GACACATCTCAAGTCATCTTAGGACTAACAAGCTTATTCGTCATAATTAACGCGGTAAGC
GCTTTCCAAATCTACGGCATGCCAACATTCGACGACATCGAGTCCAAGTACACCATGAGA
AAGAAGAAGCCATGTCCAAAGTGGCTCAGGGCACTTATCCGGGCCTTGTTTGGATTTGGG
TGCTACTTAATGGCCGTGGCCTTACCATTCGTGAGCAAGCTGACTGGACTTCTTGGTGGC
TTCGCCCTACCAATCACATTAGCCTATCCATGCTTCCTGTGGCTCAAGACCAAGAAACCA
AAAATGTATAGCCCAAGTTGGTTGATTAATTGGGGATTAGGGACATCAGGGATGGGGCTA
AGCGTAATAGTAATCGTGGCCAGTATATATGTTCTGATTGATACTGGGATTCACGTTAGC
TTCTTTAATCCTTAGTGATTAATGAATTTAGTAGAGATATGGGGAGAGAGTGAGTGAGTG
AGTGAGTGAGTAAGTGAGTCAGTGAGTGAGTTTGAATTCTAATCTCATTACCAATAATAC
AGTATATATATAGAAATTATATTTGTTATTTGTAATTATGTTCCTCCTTTCTCAAGAATG
GAATAAAAATATTGAATTAGTTTTTTT