Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_03s0038g03440.t01
CDS Infomation	cds chromosome:12X:3:2491621:2500119:-1 gene:VIT_03s0038g03440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alanine--tRNA ligase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7U4W0]
Sequence	ATGGAAGGCTTGAAGCTCGGACACACTCTGCAGAATAGCCATGGCTTGAACCTTCTTGTC CAAATTCCAAATTCAAGCTTAGTTTCCAGACCATCTTTCCCAATTCAACCCAAATGCAAC CTGGCTCTTTCCACAGGTTGCCGGGTTTATGCTGGCTCTATAATCAGAAAACTAGCCCTC ATTTCTCCCAGTGGTTTGCCCTGTGGACATTCCAATCTGAAGCAAACAAGGGAAGTACGA TTTACCACAAGAAGCACATCAGCATCAATACAGCCTATGACTGAGGAACTGGTAGAGGAC AAGTCCAAGGATCTCCCAACAAGTGGTGATTCTATACGGCACCGATTTCTCGATTTCTAT GCTTCTCGTGGGCACAAGGTTCTTCCAAGTTCTTCTCTTGTGCCAGATGATCCCACAGTT CTACTGACAATTGCAGGAATGCTTCAATTCAAGCCTATATTCCTTGGAAAGGTTCCCAGA CAAGTACCTCGTGCTACAACTGCTCAAAGGTGCATACGTACCAATGATGTGGAGAACGTA GGTAAAACATCTCGACACCATACTTTCTTTGAGATGCTTGGGAACTTCAGCTTTGGAGAT TACTTCAAGAAGGAAGCAATTAAATGGGCATGGGAGCTTTCAACAATAGAGTATGGATTG CCAGCTGACAGATTATGGATTAGTGTTTATGAAGATGATGATGAAGCTTTAGCAATATGG ACCAAAGAGGTGGGTGTTCCTGTGGAGCGCATAAAGAGGATGGGTGCTGAGGACAACTTC TGGACCAGTGGAGTGACTGGTCCCTGTGGTCCATGCTCTGAGATTTATTACGATTTCCAT CCTGAGCGGGGATATTCGGATGTTGATCTAGGTGATGACACTAGGTTTATAGAGTTTTAC AACCTGGTTTTCATGCAATACAACAAAAAAGATGATGGATCACTGGAACCCCTCAAACAG ATGAATATAGATACTGGGCTTGGCCTAGAGCGTATGGCTCGCATCCTTCAGAAGGTTCCA AACAATTACGAGACTGACTTAATTTATCCTATCATAGAGAAAGCCTCAGAATTGGCAAAT GTCTCGTATGCTCTTGCTGATGATCATGCAAAAATGAACCTTAAGGTTATTGGAGATCAT TTGCGTGCAATTGTTTATCTCATATCAGATGGTGTTGTTCCATCAAATATTGGAAGAGGT TATGTGGCTCGGCGGCTTATCAGAAGAGCTGTTCGAACTGGAAGGTTACTTGGTATAAAG GGAGATGGTAGGGGGAACCCTGAAGGGGCATTTTTACCAACCATTGCAGAAAAAGTAATA GAGTTAAGTAGCCAAATAGATCCCGATGTAAAGAGTAGAGCACCTCGCATTCTTGAGGAG TTGAAAAGGGAGGAGTTGCGTTTTGTACAGACACTAGAGAGAGGAGAAAAGTTGCTTGAT GAAATGCTGGCTAATGCATTATTAAATTCTAATGAAAATGGAAACGGGCCTATTTTGTCA GGAAAAGATGTATTTCTTTTGTATGACACTTATGGGTTTCCAGTGGAGATAACAACAGAA GCTGCTGAAGAACGTGGGGTTGGTATAGATATGAATGGTTTTGAAATTGAAATGGAGAAC CAAAGGCGGCAATCTCAGGCTGCGCATAATGCTGTTAAACTGGCAGTTGGAAATAGTGCA GATCTTACTGAAAATATTTCTGACACTGAATTTCTAGGATATGAAACCCTCTCTACCAAA GCAGTAATTGAAGGCCTCTTGGTGAATGGGAACCCAGTGATCCAAGTTTCCGAAGGAAGT GATGTAGAAATTTTTCTGAATAGGACACCATTTTATGCTGAATCAGGTGGTCAAATTGGA GATCACGGTTTCTTATATGTAAATGAAGATAGAAACCAAAAAAATGCTGTTGTTGAGATA AAAGATGTCCAGAAATCTCTGGGTAACATATTTGTTCATAAGGGCACTATCAAGGAAGGA GTTGTAGAGGTTGGCAAAGAAGTAGAAGCTGCAGTAGATGCAAACCTGAGGCAACGGGCT AAGATTCATCATACAGCTACTCATTTGCTACAAGCTGCACTTAAAAAAGTTATAGGTGAT GAAACATCACAAGCTGGTTCACTGGTGGCTTTCGATCGTCTCAGGTTTGACTTTAACTTC CACCGACCACTTCAGGAGAAGGAGCTTGTGGAAATTGAAGAATTGATCAATGGATGGATT GGGGATGCAACACTGCTCCAGACTAAAGTGATGCCTCTAGCTGATGCAAAAAGAGCTGGA GCTATTGCAATGTTTGGAGAAAAATATGGTGAACAGGTACGTGTTGTAGAGGTTCCAGGT GTATCCATGGAGCTATGTGGTGGGACCCATGTCAGCAATACTTGTGAAATACGTGGCTTC AAAATAATCTCAGAACAGGGTATTGCATCTGGGATCAGGCGTATTGAAGCTGTTGCTGGG GATGCTTTCATCGAATATGTCAATGCTAGAGATAATCACATGAGACAACTATGCTCCACT CTGAAAGTGAAAGCTGAAGAAGTGACTACTAGGGTAGAAGCTCTCTTGGAGGAGTTACGG ATGACAAGAAATGAAGTTTCTGCTGTTCGTGCAAAAGCAGCAGTATACAAAGCATCAGTT ATGGCAGGCAATGCATTCCCAGTGGGGACTTCAAAAAAAATCAGGGTACTAGTTGAGAGT ATGGATGATATTGATGCGGATTCACTAAAGAGTGCAGCTGAATACCTCATTGATACGCTA CAAGATCCTGCAGCTGTCATTTTGGGCTCATGTCCTAGTGAAGAGAAGGTAAGTTTGGTT GCAGCATTCACCCCAGGGGTTGTTGATCTAGGAATTCAAGCAGGGAAGTTTATAGGGCCC ATAGCTAAGTTGTGTGGTGGAGGAGGAGGTGGCAGACCTAATTTTGCTCAGGCAGGTGGA AGGAAGCCTGAGAATTTGTCAGGTGCTCTAGAAAAAGCTCGAGAAGAGCTTGTTGCCATT CTATCTGAAAAAGCAAGCTGA

Peptide Sequence

PEP ID	VIT_03s0038g03440.t01
PEP Infomation	pep chromosome:12X:3:2491621:2500119:-1 gene:VIT_03s0038g03440 transcript:VIT_03s0038g03440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alanine--tRNA ligase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7U4W0]
Sequence	MEGLKLGHTLQNSHGLNLLVQIPNSSLVSRPSFPIQPKCNLALSTGCRVYAGSIIRKLAL ISPSGLPCGHSNLKQTREVRFTTRSTSASIQPMTEELVEDKSKDLPTSGDSIRHRFLDFY ASRGHKVLPSSSLVPDDPTVLLTIAGMLQFKPIFLGKVPRQVPRATTAQRCIRTNDVENV GKTSRHHTFFEMLGNFSFGDYFKKEAIKWAWELSTIEYGLPADRLWISVYEDDDEALAIW TKEVGVPVERIKRMGAEDNFWTSGVTGPCGPCSEIYYDFHPERGYSDVDLGDDTRFIEFY NLVFMQYNKKDDGSLEPLKQMNIDTGLGLERMARILQKVPNNYETDLIYPIIEKASELAN VSYALADDHAKMNLKVIGDHLRAIVYLISDGVVPSNIGRGYVARRLIRRAVRTGRLLGIK GDGRGNPEGAFLPTIAEKVIELSSQIDPDVKSRAPRILEELKREELRFVQTLERGEKLLD EMLANALLNSNENGNGPILSGKDVFLLYDTYGFPVEITTEAAEERGVGIDMNGFEIEMEN QRRQSQAAHNAVKLAVGNSADLTENISDTEFLGYETLSTKAVIEGLLVNGNPVIQVSEGS DVEIFLNRTPFYAESGGQIGDHGFLYVNEDRNQKNAVVEIKDVQKSLGNIFVHKGTIKEG VVEVGKEVEAAVDANLRQRAKIHHTATHLLQAALKKVIGDETSQAGSLVAFDRLRFDFNF HRPLQEKELVEIEELINGWIGDATLLQTKVMPLADAKRAGAIAMFGEKYGEQVRVVEVPG VSMELCGGTHVSNTCEIRGFKIISEQGIASGIRRIEAVAGDAFIEYVNARDNHMRQLCST LKVKAEEVTTRVEALLEELRMTRNEVSAVRAKAAVYKASVMAGNAFPVGTSKKIRVLVES MDDIDADSLKSAAEYLIDTLQDPAAVILGSCPSEEKVSLVAAFTPGVVDLGIQAGKFIGP IAKLCGGGGGGRPNFAQAGGRKPENLSGALEKAREELVAILSEKAS

Transcript Sequence

Transcript ID	VIT_03s0038g03440.t01
Transcript Infomation	cdna chromosome:12X:3:2491621:2500119:-1 gene:VIT_03s0038g03440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alanine--tRNA ligase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7U4W0]
Sequence	GACAGACGGAGATAGAGAGCAACAGCCATGGAAGGCTTGAAGCTCGGACACACTCTGCAG AATAGCCATGGCTTGAACCTTCTTGTCCAAATTCCAAATTCAAGCTTAGTTTCCAGACCA TCTTTCCCAATTCAACCCAAATGCAACCTGGCTCTTTCCACAGGTTGCCGGGTTTATGCT GGCTCTATAATCAGAAAACTAGCCCTCATTTCTCCCAGTGGTTTGCCCTGTGGACATTCC AATCTGAAGCAAACAAGGGAAGTACGATTTACCACAAGAAGCACATCAGCATCAATACAG CCTATGACTGAGGAACTGGTAGAGGACAAGTCCAAGGATCTCCCAACAAGTGGTGATTCT ATACGGCACCGATTTCTCGATTTCTATGCTTCTCGTGGGCACAAGGTTCTTCCAAGTTCT TCTCTTGTGCCAGATGATCCCACAGTTCTACTGACAATTGCAGGAATGCTTCAATTCAAG CCTATATTCCTTGGAAAGGTTCCCAGACAAGTACCTCGTGCTACAACTGCTCAAAGGTGC ATACGTACCAATGATGTGGAGAACGTAGGTAAAACATCTCGACACCATACTTTCTTTGAG ATGCTTGGGAACTTCAGCTTTGGAGATTACTTCAAGAAGGAAGCAATTAAATGGGCATGG GAGCTTTCAACAATAGAGTATGGATTGCCAGCTGACAGATTATGGATTAGTGTTTATGAA GATGATGATGAAGCTTTAGCAATATGGACCAAAGAGGTGGGTGTTCCTGTGGAGCGCATA AAGAGGATGGGTGCTGAGGACAACTTCTGGACCAGTGGAGTGACTGGTCCCTGTGGTCCA TGCTCTGAGATTTATTACGATTTCCATCCTGAGCGGGGATATTCGGATGTTGATCTAGGT GATGACACTAGGTTTATAGAGTTTTACAACCTGGTTTTCATGCAATACAACAAAAAAGAT GATGGATCACTGGAACCCCTCAAACAGATGAATATAGATACTGGGCTTGGCCTAGAGCGT ATGGCTCGCATCCTTCAGAAGGTTCCAAACAATTACGAGACTGACTTAATTTATCCTATC ATAGAGAAAGCCTCAGAATTGGCAAATGTCTCGTATGCTCTTGCTGATGATCATGCAAAA ATGAACCTTAAGGTTATTGGAGATCATTTGCGTGCAATTGTTTATCTCATATCAGATGGT GTTGTTCCATCAAATATTGGAAGAGGTTATGTGGCTCGGCGGCTTATCAGAAGAGCTGTT CGAACTGGAAGGTTACTTGGTATAAAGGGAGATGGTAGGGGGAACCCTGAAGGGGCATTT TTACCAACCATTGCAGAAAAAGTAATAGAGTTAAGTAGCCAAATAGATCCCGATGTAAAG AGTAGAGCACCTCGCATTCTTGAGGAGTTGAAAAGGGAGGAGTTGCGTTTTGTACAGACA CTAGAGAGAGGAGAAAAGTTGCTTGATGAAATGCTGGCTAATGCATTATTAAATTCTAAT GAAAATGGAAACGGGCCTATTTTGTCAGGAAAAGATGTATTTCTTTTGTATGACACTTAT GGGTTTCCAGTGGAGATAACAACAGAAGCTGCTGAAGAACGTGGGGTTGGTATAGATATG AATGGTTTTGAAATTGAAATGGAGAACCAAAGGCGGCAATCTCAGGCTGCGCATAATGCT GTTAAACTGGCAGTTGGAAATAGTGCAGATCTTACTGAAAATATTTCTGACACTGAATTT CTAGGATATGAAACCCTCTCTACCAAAGCAGTAATTGAAGGCCTCTTGGTGAATGGGAAC CCAGTGATCCAAGTTTCCGAAGGAAGTGATGTAGAAATTTTTCTGAATAGGACACCATTT TATGCTGAATCAGGTGGTCAAATTGGAGATCACGGTTTCTTATATGTAAATGAAGATAGA AACCAAAAAAATGCTGTTGTTGAGATAAAAGATGTCCAGAAATCTCTGGGTAACATATTT GTTCATAAGGGCACTATCAAGGAAGGAGTTGTAGAGGTTGGCAAAGAAGTAGAAGCTGCA GTAGATGCAAACCTGAGGCAACGGGCTAAGATTCATCATACAGCTACTCATTTGCTACAA GCTGCACTTAAAAAAGTTATAGGTGATGAAACATCACAAGCTGGTTCACTGGTGGCTTTC GATCGTCTCAGGTTTGACTTTAACTTCCACCGACCACTTCAGGAGAAGGAGCTTGTGGAA ATTGAAGAATTGATCAATGGATGGATTGGGGATGCAACACTGCTCCAGACTAAAGTGATG CCTCTAGCTGATGCAAAAAGAGCTGGAGCTATTGCAATGTTTGGAGAAAAATATGGTGAA CAGGTACGTGTTGTAGAGGTTCCAGGTGTATCCATGGAGCTATGTGGTGGGACCCATGTC AGCAATACTTGTGAAATACGTGGCTTCAAAATAATCTCAGAACAGGGTATTGCATCTGGG ATCAGGCGTATTGAAGCTGTTGCTGGGGATGCTTTCATCGAATATGTCAATGCTAGAGAT AATCACATGAGACAACTATGCTCCACTCTGAAAGTGAAAGCTGAAGAAGTGACTACTAGG GTAGAAGCTCTCTTGGAGGAGTTACGGATGACAAGAAATGAAGTTTCTGCTGTTCGTGCA AAAGCAGCAGTATACAAAGCATCAGTTATGGCAGGCAATGCATTCCCAGTGGGGACTTCA AAAAAAATCAGGGTACTAGTTGAGAGTATGGATGATATTGATGCGGATTCACTAAAGAGT GCAGCTGAATACCTCATTGATACGCTACAAGATCCTGCAGCTGTCATTTTGGGCTCATGT CCTAGTGAAGAGAAGGTAAGTTTGGTTGCAGCATTCACCCCAGGGGTTGTTGATCTAGGA ATTCAAGCAGGGAAGTTTATAGGGCCCATAGCTAAGTTGTGTGGTGGAGGAGGAGGTGGC AGACCTAATTTTGCTCAGGCAGGTGGAAGGAAGCCTGAGAATTTGTCAGGTGCTCTAGAA AAAGCTCGAGAAGAGCTTGTTGCCATTCTATCTGAAAAAGCAAGCTGAAATCAGTTATAG TCTATTGGCATGAAATTTCTACTTGGAGTCAAGTACCCAAGACCATACTTGCTTCAGAAA GATTCAGAGAATTCTACTGCAGTAGCTGCAAAGAGTAAGTGTACTTCCATATATCATCAT GTTCAATCACACACCAACAGCATACAAAAATACTTTTTCTTTTCTTTTTGATAGGAAAAA GGAAACTGTAAACGCATGGTATAGTTTTACTTCATTGTGATTCTCGTAATGAAGTATGGC CTTGAGCAAGCCAATATGTACATGCTCTTCTCC