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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03400.t01
CDS Infomation

cds chromosome:12X:3:2462685:2464095:1 gene:VIT_03s0038g03400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHIT1B description:Chitinase class I [Source:UniProtKB/TrEMBL;Acc:Q546P8]
Sequence

ATGGGGTTGTGGGCATTGGTAGCTTTCTGTCTGTTGTCATTAATACTGGTTGGCTCAGCA
GAGCAATGTGGAGGGCAAGCTGGGGGTAGAGTTTGCCCAGGGGGGGCATGCTGCAGCAAG
TTTGGTTGGTGTGGCAACACTGCTGATTACTGTGGCAGTGGCTGCCAAAGCCAGTGCAGT
TCCACTGGTGACATTGGCCAGCTTATTACCAGGTCCATGTTCAATGATATGCTTAAGCAT
AGAAATGAGGGGAGTTGCCCTGGCAAGGGCTTCTACACCTATGACGCTTTCATAGCTGCT
GCTAAGGCCTTTCCTGGCTTTGGAACAACTGGTGATACCACTACTCGTAAAAGGGAAATC
GCAGCCTTCTTGGCTCAAACTTCTCATGAAACCACTGGGGGGTGGGCTAGTGCACCTGAT
GGCCCATACGCTTGGGGATACTGCTACCTCAGGGAACAAGGCAGCCCCGGAGCTTACTGT
GTTCCTAGTGCACAGTGGCCTTGTGCCGCTGGTAGGAAATACTATGGCCGAGGCCCCATA
CAGATTTCCTACAACTACAACTATGGGCAAGCTGGGAAAGCCATAGGGGTAGACCTGGTA
AACAACCCTGATCTAGTAGCAACAGATGCAGTCATATCATTCAAGACAGCCTTCTGGTTC
TGGATGACACCCCAGTCACCCAAGCCTTCCTGCCATAATGTCATCACAGGAGGATGGACC
CCATCAGGTGCAGATAGGTCAGCAGGGCGGCTTCCCGGTTTTGGTGTTATCACAAACATC
ATCAATGGAGGTGTTGAATGTGGGAAAGGGGTAGTTCCTCAGGTCCAGGACCGCATAGGT
TTCTATAAGAGGTACTGTGATATACTTAGGGTTAGCTATGGCAACAACCTGGACTGCAAC
AACCAAAGGCCTTTCGGGTCTGGCCTCCTGCTGGACACCATCTAA

Peptide Sequence

PEP ID

VIT_03s0038g03400.t01
PEP Infomation

pep chromosome:12X:3:2462685:2464095:1 gene:VIT_03s0038g03400 transcript:VIT_03s0038g03400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHIT1B description:Chitinase class I [Source:UniProtKB/TrEMBL;Acc:Q546P8]
Sequence

MGLWALVAFCLLSLILVGSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCS
STGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREI
AAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPI
QISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWT
PSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCN
NQRPFGSGLLLDTI

Transcript Sequence

Transcript ID

VIT_03s0038g03400.t01
Transcript Infomation

cdna chromosome:12X:3:2462685:2464095:1 gene:VIT_03s0038g03400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHIT1B description:Chitinase class I [Source:UniProtKB/TrEMBL;Acc:Q546P8]
Sequence

AACAAATAGAGAAATGGGGTTGTGGGCATTGGTAGCTTTCTGTCTGTTGTCATTAATACT
GGTTGGCTCAGCAGAGCAATGTGGAGGGCAAGCTGGGGGTAGAGTTTGCCCAGGGGGGGC
ATGCTGCAGCAAGTTTGGTTGGTGTGGCAACACTGCTGATTACTGTGGCAGTGGCTGCCA
AAGCCAGTGCAGTTCCACTGGTGACATTGGCCAGCTTATTACCAGGTCCATGTTCAATGA
TATGCTTAAGCATAGAAATGAGGGGAGTTGCCCTGGCAAGGGCTTCTACACCTATGACGC
TTTCATAGCTGCTGCTAAGGCCTTTCCTGGCTTTGGAACAACTGGTGATACCACTACTCG
TAAAAGGGAAATCGCAGCCTTCTTGGCTCAAACTTCTCATGAAACCACTGGGGGGTGGGC
TAGTGCACCTGATGGCCCATACGCTTGGGGATACTGCTACCTCAGGGAACAAGGCAGCCC
CGGAGCTTACTGTGTTCCTAGTGCACAGTGGCCTTGTGCCGCTGGTAGGAAATACTATGG
CCGAGGCCCCATACAGATTTCCTACAACTACAACTATGGGCAAGCTGGGAAAGCCATAGG
GGTAGACCTGGTAAACAACCCTGATCTAGTAGCAACAGATGCAGTCATATCATTCAAGAC
AGCCTTCTGGTTCTGGATGACACCCCAGTCACCCAAGCCTTCCTGCCATAATGTCATCAC
AGGAGGATGGACCCCATCAGGTGCAGATAGGTCAGCAGGGCGGCTTCCCGGTTTTGGTGT
TATCACAAACATCATCAATGGAGGTGTTGAATGTGGGAAAGGGGTAGTTCCTCAGGTCCA
GGACCGCATAGGTTTCTATAAGAGGTACTGTGATATACTTAGGGTTAGCTATGGCAACAA
CCTGGACTGCAACAACCAAAGGCCTTTCGGGTCTGGCCTCCTGCTGGACACCATCTAAAG
TTGCTGTATGCTTTCTGCTCAACCTGTTTTGTCCACTCTGCTATGGTGATGTGAGAAGTT
GTATCCATGAACTGTATGAATAAACGTCTTAGTTGCTACATCAAACAACTAAGAGAAGAT
CAATAATATGCAAAATTTTGTTTTC