Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03350.t01
CDS Infomation

cds chromosome:12X:3:2442446:2443350:1 gene:VIT_03s0038g03350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCCTCTCTGTTAAATCCCAAAGCCCAGTATCATGCTCGCTCTATTAGCTTACCC
TCTAGACCACACCCACTTGTTCCTGAATTTGATAAGCATTTGTGCAGATTAAGAACTTCT
CAAGCTGCCTCATCATCATCATCAGTAAGTCACAGACTCAGTGGTCTTAAGGATCTGCAT
GACTGTGTAGATGATTTACTTCTGTTGCCACTTACTCAACAGACCCTAGCCCATCACCGC
CATGAGAAATGGGTTAATGAGCTGTTGGATGGGTCTCTCAAGCTGTTGGATGTGTGTGGC
ACCGCTAAGGATGCCTTGTTGCAGACAAGGGAACATGCAAATGAACTTCAATCAAGTCTG
AGAAGAAGGCGGGGAGGCCAAAATGGGATCTCAACTGAGGTTGGAGAATATTTAACCTCT
AGGAAGAAGGTAAAGAAGGCAATGCACAAAGCCCTAAGGAATCTGAAGAGCATGGACAAC
AAGAGCAGATTCTCTCCCTTGAACAAAGACCCTGAGACTCTCTCCATGGTTAGCATGTTA
AGGGAGGTAGAAGGAGTCACTCTCACAGTGCTTGAATCTTTGTTGTCCTCGATAGCAGGG
GAAGCAGCAAGATCTAAACCAAGTAGTTGGTCTGTGGTCTCAAAACTGATCCACCACAAG
CGTGTGGTATGTGAGGAGGCAGCAGGAGATCTCAGTGAATTTGAAAAGGTGGATTGTTCA
TTGTTCACCCTCATTGGCCACAAGACGAAATCTGTTAACCAGATTCACATTGATACCATA
CAAAATGCATTAGGAAAATTGGAATCAAGTATTGAAGATCTTGAAGAAGGGATAGAGTTC
CTATCAAGGCATTTAATCAAAACCAGGGTGTCTTTCCTCAACATCCTCAGCCACTAG

Peptide Sequence

PEP ID

VIT_03s0038g03350.t01
PEP Infomation

pep chromosome:12X:3:2442446:2443350:1 gene:VIT_03s0038g03350 transcript:VIT_03s0038g03350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAASLLNPKAQYHARSISLPSRPHPLVPEFDKHLCRLRTSQAASSSSSVSHRLSGLKDLH
DCVDDLLLLPLTQQTLAHHRHEKWVNELLDGSLKLLDVCGTAKDALLQTREHANELQSSL
RRRRGGQNGISTEVGEYLTSRKKVKKAMHKALRNLKSMDNKSRFSPLNKDPETLSMVSML
REVEGVTLTVLESLLSSIAGEAARSKPSSWSVVSKLIHHKRVVCEEAAGDLSEFEKVDCS
LFTLIGHKTKSVNQIHIDTIQNALGKLESSIEDLEEGIEFLSRHLIKTRVSFLNILSH

Transcript Sequence

Transcript ID

VIT_03s0038g03350.t01
Transcript Infomation

cdna chromosome:12X:3:2442446:2443350:1 gene:VIT_03s0038g03350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGCAAAAATGGCTGCCTCTCTGTTAAATCCCAAAGCCCAGTATCATGCTCGCTCTATTA
GCTTACCCTCTAGACCACACCCACTTGTTCCTGAATTTGATAAGCATTTGTGCAGATTAA
GAACTTCTCAAGCTGCCTCATCATCATCATCAGTAAGTCACAGACTCAGTGGTCTTAAGG
ATCTGCATGACTGTGTAGATGATTTACTTCTGTTGCCACTTACTCAACAGACCCTAGCCC
ATCACCGCCATGAGAAATGGGTTAATGAGCTGTTGGATGGGTCTCTCAAGCTGTTGGATG
TGTGTGGCACCGCTAAGGATGCCTTGTTGCAGACAAGGGAACATGCAAATGAACTTCAAT
CAAGTCTGAGAAGAAGGCGGGGAGGCCAAAATGGGATCTCAACTGAGGTTGGAGAATATT
TAACCTCTAGGAAGAAGGTAAAGAAGGCAATGCACAAAGCCCTAAGGAATCTGAAGAGCA
TGGACAACAAGAGCAGATTCTCTCCCTTGAACAAAGACCCTGAGACTCTCTCCATGGTTA
GCATGTTAAGGGAGGTAGAAGGAGTCACTCTCACAGTGCTTGAATCTTTGTTGTCCTCGA
TAGCAGGGGAAGCAGCAAGATCTAAACCAAGTAGTTGGTCTGTGGTCTCAAAACTGATCC
ACCACAAGCGTGTGGTATGTGAGGAGGCAGCAGGAGATCTCAGTGAATTTGAAAAGGTGG
ATTGTTCATTGTTCACCCTCATTGGCCACAAGACGAAATCTGTTAACCAGATTCACATTG
ATACCATACAAAATGCATTAGGAAAATTGGAATCAAGTATTGAAGATCTTGAAGAAGGGA
TAGAGTTCCTATCAAGGCATTTAATCAAAACCAGGGTGTCTTTCCTCAACATCCTCAGCC
ACTAG