Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03340.t01
CDS Infomation

cds chromosome:12X:3:2438799:2439692:-1 gene:VIT_03s0038g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGTATCTCCTTTAAACACAAAAGCCTGTTATCATGCTCGCTCTATCAGCTTGCCC
TCTAGACCACACCCTCTCATTCCTGAATTTGATGAGCATTTGCGCAGATTAAGAGCTTCT
GAAGCCACCTCTTCATCATCCATAAGCCACAAACTTAGTGGCCTTAGAGATCTACACGAT
TGTGTTGATGATTTGCTTCTGATGCCACTCACTCAACAAATCTTAGCTCAATACCGCCAT
GAGCAATGGGTTGATGAGCTGTTGGATGGATCTCTCAGGCTTCTAGACATATGCAGCACA
GCTAAGGATGCCTTGTTGCAGACAAGGGAAGGTGCTCAGGAGCTTCAATCAAGAATGCGC
AGAAGGCGAGGAAGTGAAAATGGGATCTCAAATGAGATTGAGAAATATTTAAGCTCTAGG
AAGAAGGTAAAGAAGGCAATCCACAAGGCCCTAAGGAATCTGACGGGCATGGAGAAGGAG
TGCAGATTCTCTACCTTGAACAAAGACACTGAGACTCTCTCCATGGTCAGCATGTTAAGA
GAGGTGGAAACAATCACCCTCACAGTGCTTGGAGCTCTGCTGTCCTCAGTAGCTGGGGCT
GCAGCACAATCAAAGCGAAGTGGCTGGTCTTTAGTCTCAAAATTGATGCAACACAAGCGT
GTGGCATGTGAGGAAGCAGAATCCGATCATGGTGAATTTGAGATGGTGGATGCTGCATTG
TGCACTATCCTTTGCAACAAGAATAAATCAGTTAATCTTGTACATGCTGATGATGTGCAT
AATGAGTTAGGGAAACTGGAATTGAGCATTCATGATCTTGAAGAAGAGATAGAATTACTA
TCAAGACGATTAATCAAAACCAGGGTGTCTCTCCTCAACATCCTCAGCCAATAG

Peptide Sequence

PEP ID

VIT_03s0038g03340.t01
PEP Infomation

pep chromosome:12X:3:2438799:2439692:-1 gene:VIT_03s0038g03340 transcript:VIT_03s0038g03340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVSPLNTKACYHARSISLPSRPHPLIPEFDEHLRRLRASEATSSSSISHKLSGLRDLHD
CVDDLLLMPLTQQILAQYRHEQWVDELLDGSLRLLDICSTAKDALLQTREGAQELQSRMR
RRRGSENGISNEIEKYLSSRKKVKKAIHKALRNLTGMEKECRFSTLNKDTETLSMVSMLR
EVETITLTVLGALLSSVAGAAAQSKRSGWSLVSKLMQHKRVACEEAESDHGEFEMVDAAL
CTILCNKNKSVNLVHADDVHNELGKLELSIHDLEEEIELLSRRLIKTRVSLLNILSQ

Transcript Sequence

Transcript ID

VIT_03s0038g03340.t01
Transcript Infomation

cdna chromosome:12X:3:2438799:2439692:-1 gene:VIT_03s0038g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGTATCTCCTTTAAACACAAAAGCCTGTTATCATGCTCGCTCTATCAGCTTGCCC
TCTAGACCACACCCTCTCATTCCTGAATTTGATGAGCATTTGCGCAGATTAAGAGCTTCT
GAAGCCACCTCTTCATCATCCATAAGCCACAAACTTAGTGGCCTTAGAGATCTACACGAT
TGTGTTGATGATTTGCTTCTGATGCCACTCACTCAACAAATCTTAGCTCAATACCGCCAT
GAGCAATGGGTTGATGAGCTGTTGGATGGATCTCTCAGGCTTCTAGACATATGCAGCACA
GCTAAGGATGCCTTGTTGCAGACAAGGGAAGGTGCTCAGGAGCTTCAATCAAGAATGCGC
AGAAGGCGAGGAAGTGAAAATGGGATCTCAAATGAGATTGAGAAATATTTAAGCTCTAGG
AAGAAGGTAAAGAAGGCAATCCACAAGGCCCTAAGGAATCTGACGGGCATGGAGAAGGAG
TGCAGATTCTCTACCTTGAACAAAGACACTGAGACTCTCTCCATGGTCAGCATGTTAAGA
GAGGTGGAAACAATCACCCTCACAGTGCTTGGAGCTCTGCTGTCCTCAGTAGCTGGGGCT
GCAGCACAATCAAAGCGAAGTGGCTGGTCTTTAGTCTCAAAATTGATGCAACACAAGCGT
GTGGCATGTGAGGAAGCAGAATCCGATCATGGTGAATTTGAGATGGTGGATGCTGCATTG
TGCACTATCCTTTGCAACAAGAATAAATCAGTTAATCTTGTACATGCTGATGATGTGCAT
AATGAGTTAGGGAAACTGGAATTGAGCATTCATGATCTTGAAGAAGAGATAGAATTACTA
TCAAGACGATTAATCAAAACCAGGGTGTCTCTCCTCAACATCCTCAGCCAATAG