Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03320.t01
CDS Infomation

cds chromosome:12X:3:2434389:2435319:-1 gene:VIT_03s0038g03320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCTCTTTCCTTCAAACCCAAAAGCCTCCTATCATGCTCGCTCTATTAGCTTGCCC
TCTAGACCACACCCTCTCATTCCTGAATTTGATGAGCTTTTGTGCAGAGTAAGAGCCTCT
GAAGCCACCTCTTCATCATCATCAATAAGCCACAAACTTAGTGGCCTTAGAGATGTACAT
GATTGTGTGGATGATTTGCTTCTGCTCCCATTCACTCAACAAACCTTAGCTCAAAACCGC
CATGAGAAATGGGTTGATGAGCTGTTGGATGGATCTCTCAGGCTTCTGGACATATGTGGC
GCTGCTAAGGATTCCTTGCTGCAGACAAGGGAAGGTGCACACGAACTTCAATCTAGTATG
CGCAGAAGGTGTAGAACTGAAAATGGGATCTCCAGTGAGATTGGGAACTATTTAACTTCT
AGGAAGAAGGTAAAGAAGACAATCCACAAGTGCCTAAGGAATCTGAAGGGCATGAAGAGC
AAGTGCGGATTCTTTGCCTCGAACAAAGACACTGAGACTCTCTCCATGGTCAGCATGTTA
AGAGAGGTGGAAACAGTCACTCTCACAGTGCTTGAAGCTCTATTGTCCTTAATAGCTGGG
CCAACAGCAGGATCAAAGACAAGTGGCTGGTCGTTAGTCTCAAAATTGAAGCAACACAAG
CGCGTGGCATGTGAGGAAGCAGAAGCCGAAATTAGTGAATTTGAGAAGGTGGATGCTGCA
TTGTGCACCATTCTTGCCAACAAGAACAAATCAGTTAATGTAGTGCATGCTGATAATGTG
CATAATGAGGTAGCAAAACTAGAATCAAGCATTCAAGATCTTGAAGAAGGGATAGAGTTC
CTATCAAGGCGTTTAATCAAAACCAGGGTGTCTCTCCTCAACATCCTCAGCCATTAG

Peptide Sequence

PEP ID

VIT_03s0038g03320.t01
PEP Infomation

pep chromosome:12X:3:2434389:2435319:-1 gene:VIT_03s0038g03320 transcript:VIT_03s0038g03320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALFPSNPKASYHARSISLPSRPHPLIPEFDELLCRVRASEATSSSSSISHKLSGLRDVH
DCVDDLLLLPFTQQTLAQNRHEKWVDELLDGSLRLLDICGAAKDSLLQTREGAHELQSSM
RRRCRTENGISSEIGNYLTSRKKVKKTIHKCLRNLKGMKSKCGFFASNKDTETLSMVSML
REVETVTLTVLEALLSLIAGPTAGSKTSGWSLVSKLKQHKRVACEEAEAEISEFEKVDAA
LCTILANKNKSVNVVHADNVHNEVAKLESSIQDLEEGIEFLSRRLIKTRVSLLNILSH

Transcript Sequence

Transcript ID

VIT_03s0038g03320.t01
Transcript Infomation

cdna chromosome:12X:3:2434389:2435319:-1 gene:VIT_03s0038g03320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCAGGCCTTCTTTTCTCCCTAACTAGGAAGAAAATGGCTCTCTTTCCTTCAAACCCAAA
AGCCTCCTATCATGCTCGCTCTATTAGCTTGCCCTCTAGACCACACCCTCTCATTCCTGA
ATTTGATGAGCTTTTGTGCAGAGTAAGAGCCTCTGAAGCCACCTCTTCATCATCATCAAT
AAGCCACAAACTTAGTGGCCTTAGAGATGTACATGATTGTGTGGATGATTTGCTTCTGCT
CCCATTCACTCAACAAACCTTAGCTCAAAACCGCCATGAGAAATGGGTTGATGAGCTGTT
GGATGGATCTCTCAGGCTTCTGGACATATGTGGCGCTGCTAAGGATTCCTTGCTGCAGAC
AAGGGAAGGTGCACACGAACTTCAATCTAGTATGCGCAGAAGGTGTAGAACTGAAAATGG
GATCTCCAGTGAGATTGGGAACTATTTAACTTCTAGGAAGAAGGTAAAGAAGACAATCCA
CAAGTGCCTAAGGAATCTGAAGGGCATGAAGAGCAAGTGCGGATTCTTTGCCTCGAACAA
AGACACTGAGACTCTCTCCATGGTCAGCATGTTAAGAGAGGTGGAAACAGTCACTCTCAC
AGTGCTTGAAGCTCTATTGTCCTTAATAGCTGGGCCAACAGCAGGATCAAAGACAAGTGG
CTGGTCGTTAGTCTCAAAATTGAAGCAACACAAGCGCGTGGCATGTGAGGAAGCAGAAGC
CGAAATTAGTGAATTTGAGAAGGTGGATGCTGCATTGTGCACCATTCTTGCCAACAAGAA
CAAATCAGTTAATGTAGTGCATGCTGATAATGTGCATAATGAGGTAGCAAAACTAGAATC
AAGCATTCAAGATCTTGAAGAAGGGATAGAGTTCCTATCAAGGCGTTTAATCAAAACCAG
GGTGTCTCTCCTCAACATCCTCAGCCATTAG