Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03230.t01
CDS Infomation

cds chromosome:12X:3:2346305:2352462:-1 gene:VIT_03s0038g03230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAACGCTCCCGATAATAAGCTCACTTCCTCAAGCTCCGAGCTCGACTTGGATCGC
CCCAATCTCGAAGACTACCTTCCCTCCGGATCCATGCAAGAACCTCGCGGCAAGCTTCGC
CTGCGTGATTTATTGGACATTTCGCCGACCCTAACCGAGGCTGCTGGGGCCATTGTTGAC
GACTCTTTCACACGATGTTTCAAGTCGAACCCTCCGGAGCCTTGGAACTGGAATGTGTAT
TTGTTTCCTCTTTGGTGTTTGGGAGTGGTAATTCGATATGGAATTTTATTTCCCACAAGG
GTTCTAGTACTCACACTGGGGTGGATAATATTCCTTTCATCCTTTATTCCAGTACATTTT
CTATTGAAGGGAAACGATAAGTTGAGGAAAAAGTTGGAGAGATGTCTAGTGGAGTTAATT
TGCAGCTTCTTTGTTGCATCATGGACTGGAGTTGTCAAGTACCATGGGCCACGGCCTAGC
AGGAGGCCTCAGCAGGTTTTTGTTGCCAATCATACTTCCATGATTGATTTTATCGTTTTA
GAACAGATGACTGCATTTGCAGTTATTATGCAGAAGCATCCTGGCTGGGTTGGATTGCTG
CAAAGTACCATTTTGGAGAGTGTAGGATGTATCTGGTTCAATCGTACAGAAGCAAAGGAC
CGTGAAATTGTTGCTAGGAAGCTAAGGGATCATGTTCAGGGGGCTGACAACAACCCTCTT
CTCATATTCCCAGAAGGAACTTGTGTGAATAACCACTACACTGTCATGTTCAAGAAGGGC
GCATTCGAACTTGGCTGCACTGTTTGCCCTATTGCAATAAAGTACAATAAGATTTTCGTT
GATGCTTTCTGGAACAGTAAGAAGCAATCCTTTACAATGCATCTTCTGCAGCTTATGACA
TCCTGGGCTGTCGTTTGTGATGTTTGGTACTTAGAGCCCCAAACATTGAAGCCAGGAGAG
ACACCCATTGAATTTGCAGAGAGGGTCAGGGACATAATTTCTCTTCGAGCTGGTTTGAAA
AAGGTTCCTTGGGATGGATATTTGAAGTACTCTCGCCCTAGCCCAAAGCATAGAGAGCAG
AAGCAGCAGAGCTTTGCTGATTCAGTGTTACGGCGCCTGGAAGAGAAGTGA

Peptide Sequence

PEP ID

VIT_03s0038g03230.t01
PEP Infomation

pep chromosome:12X:3:2346305:2352462:-1 gene:VIT_03s0038g03230 transcript:VIT_03s0038g03230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MANAPDNKLTSSSSELDLDRPNLEDYLPSGSMQEPRGKLRLRDLLDISPTLTEAAGAIVD
DSFTRCFKSNPPEPWNWNVYLFPLWCLGVVIRYGILFPTRVLVLTLGWIIFLSSFIPVHF
LLKGNDKLRKKLERCLVELICSFFVASWTGVVKYHGPRPSRRPQQVFVANHTSMIDFIVL
EQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRTEAKDREIVARKLRDHVQGADNNPL
LIFPEGTCVNNHYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNSKKQSFTMHLLQLMT
SWAVVCDVWYLEPQTLKPGETPIEFAERVRDIISLRAGLKKVPWDGYLKYSRPSPKHREQ
KQQSFADSVLRRLEEK

Transcript Sequence

Transcript ID

VIT_03s0038g03230.t01
Transcript Infomation

cdna chromosome:12X:3:2346305:2352462:-1 gene:VIT_03s0038g03230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAAGTGTAAGAGAATCGTAGCACATGAAACTCGTACACCGAAAGGGAAGATAAACTGC
AACAGAGGAATCTGAAGGCTCCCTTGCACACGAAGCCATGGCCAACGCTCCCGATAATAA
GCTCACTTCCTCAAGCTCCGAGCTCGACTTGGATCGCCCCAATCTCGAAGACTACCTTCC
CTCCGGATCCATGCAAGAACCTCGCGGCAAGCTTCGCCTGCGTGATTTATTGGACATTTC
GCCGACCCTAACCGAGGCTGCTGGGGCCATTGTTGACGACTCTTTCACACGATGTTTCAA
GTCGAACCCTCCGGAGCCTTGGAACTGGAATGTGTATTTGTTTCCTCTTTGGTGTTTGGG
AGTGGTAATTCGATATGGAATTTTATTTCCCACAAGGGTTCTAGTACTCACACTGGGGTG
GATAATATTCCTTTCATCCTTTATTCCAGTACATTTTCTATTGAAGGGAAACGATAAGTT
GAGGAAAAAGTTGGAGAGATGTCTAGTGGAGTTAATTTGCAGCTTCTTTGTTGCATCATG
GACTGGAGTTGTCAAGTACCATGGGCCACGGCCTAGCAGGAGGCCTCAGCAGGTTTTTGT
TGCCAATCATACTTCCATGATTGATTTTATCGTTTTAGAACAGATGACTGCATTTGCAGT
TATTATGCAGAAGCATCCTGGCTGGGTTGGATTGCTGCAAAGTACCATTTTGGAGAGTGT
AGGATGTATCTGGTTCAATCGTACAGAAGCAAAGGACCGTGAAATTGTTGCTAGGAAGCT
AAGGGATCATGTTCAGGGGGCTGACAACAACCCTCTTCTCATATTCCCAGAAGGAACTTG
TGTGAATAACCACTACACTGTCATGTTCAAGAAGGGCGCATTCGAACTTGGCTGCACTGT
TTGCCCTATTGCAATAAAGTACAATAAGATTTTCGTTGATGCTTTCTGGAACAGTAAGAA
GCAATCCTTTACAATGCATCTTCTGCAGCTTATGACATCCTGGGCTGTCGTTTGTGATGT
TTGGTACTTAGAGCCCCAAACATTGAAGCCAGGAGAGACACCCATTGAATTTGCAGAGAG
GGTCAGGGACATAATTTCTCTTCGAGCTGGTTTGAAAAAGGTTCCTTGGGATGGATATTT
GAAGTACTCTCGCCCTAGCCCAAAGCATAGAGAGCAGAAGCAGCAGAGCTTTGCTGATTC
AGTGTTACGGCGCCTGGAAGAGAAGTGATATACATATTACATCTTCTGAAGTAAGTGTTT
CGTGTTTGTTCAGGCATCACATTCCTTGCTGCACACCTGATTTCCCCCCCTAGTGGTTGG
TAAAAAATTTCTTGGAAGACACTCTAAGACCTGTGTACAATTTTGCATCTCAAAATAAGA
TTGTCTTATATGATTATTGATTGTATCAGTGAACTGTGGAAATATTGCTACTGTTTCGAA
CCTGTCATGGTAATTGATCCAATTTCTAGCAGC