Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03220.t01
CDS Infomation

cds chromosome:12X:3:2338609:2344558:-1 gene:VIT_03s0038g03220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCTGCTACGCTGCTTCTCGCCCTATCCTTCCTCTCGGTGCTCATCACTGCGCCG
AGAGCTCAGGCCAGCTTCAAATGCAGCTCCGGCCCCACCTGTAACGCTCTCGTCGGCTAC
GTCTCCCCCAACACCACCACTCTATCCGCCATCCAGACTCTCTTCGGCGTCAAAAACTTT
CGAACTCTACTCGGCGCCAACTCCCTCCCGGCCTCGACCCCAACGAACCAAAGCGTAGCC
GCGAAGGACAAGATCGTCATCCCCTTCCGCTGCCGCTGCTCTAACGGAACCGGAATTTCG
AACCACCGGCCGGTGTACACTGTGCAGAAGGACGACGGACTGTACCACATCGCGGCGGAG
GTGTTCGCGGGACTGGTGACGTATCAGGAGATTCAGGCGGTGAACAACATTTCGGATGCG
AATTTGATTGAAGTAGGGCAAGAGCTGTGGATTCCGCTGCCGTGTAGCTGCGATGAGGTG
AATGAATCGAAGGTGGTGCACTACGGGCACGTGGTGGAATCCGGAAGCTCCGTGGCGGAG
ATCGCGGAGAAGTACGGAACCACCGAAGAGACGCTGTTGGAGCTCAACAACATTACAGAT
CCCAAGAATCTTAAGGCCGGTGATGTCCTTGATGTTCCCCTCAAAGCTTGTACTTCTGTG
GTAAAGAACACCTCATTGGACTACCCATTACTCCTCTCTAATGGTACTTATGCCTACACT
GCAAACAATTGTGTGAAGTGCCAGTGTTATTCTGCAAACAACTGGACATTACAATGTGAG
CAATCCGGGCTTAATATAACAAATGGAACGTGCCCTAGCATGGAATGTGGGAGTAGTGGT
TTATCCATTGGCAACTCCACATCTACCACTTGTAACAGGACAACCTGTGCCTATGCTGGT
TACACCAACCAAACAATCTTCACAAGCCTTGTTGAGTCCACTTGTTCATCTACTAACAAT
GCTCCCAGCTATGCTTCGAAAATCACTCTGCCCAGTTGGAGATGGAACTTTGTTTTCATA
GTAAGCCAATTGGTTATGCTTTATCTTCATCATTCCCAAGAGCCCAGATTCCAGCATTTC
AACAAGAGCTTTCGTTGTCATTGCCAAAGGGAGGAATACATCATTAGTTGA

Peptide Sequence

PEP ID

VIT_03s0038g03220.t01
PEP Infomation

pep chromosome:12X:3:2338609:2344558:-1 gene:VIT_03s0038g03220 transcript:VIT_03s0038g03220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSATLLLALSFLSVLITAPRAQASFKCSSGPTCNALVGYVSPNTTTLSAIQTLFGVKNF
RTLLGANSLPASTPTNQSVAAKDKIVIPFRCRCSNGTGISNHRPVYTVQKDDGLYHIAAE
VFAGLVTYQEIQAVNNISDANLIEVGQELWIPLPCSCDEVNESKVVHYGHVVESGSSVAE
IAEKYGTTEETLLELNNITDPKNLKAGDVLDVPLKACTSVVKNTSLDYPLLLSNGTYAYT
ANNCVKCQCYSANNWTLQCEQSGLNITNGTCPSMECGSSGLSIGNSTSTTCNRTTCAYAG
YTNQTIFTSLVESTCSSTNNAPSYASKITLPSWRWNFVFIVSQLVMLYLHHSQEPRFQHF
NKSFRCHCQREEYIIS

Transcript Sequence

Transcript ID

VIT_03s0038g03220.t01
Transcript Infomation

cdna chromosome:12X:3:2338609:2344558:-1 gene:VIT_03s0038g03220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGCTGACGAAGTCTTTGTCAAAGTCTTCGCAATCACATTGCGTCTGCTCTTCTTCTGTT
CTGCTTCGCGGTTTCCTTCTTTTCACACCTTGACCTTTCTCCGAAGATGCTAACGTGCAC
ACCGGTGGTCCCTCCCCTGAACTCCACCCCTCTGCTCCATATAACTCCTTCTCTCTCCAA
TCCACCACTCTCCGTACCACTCCGCCATGGGTTCTGCTACGCTGCTTCTCGCCCTATCCT
TCCTCTCGGTGCTCATCACTGCGCCGAGAGCTCAGGCCAGCTTCAAATGCAGCTCCGGCC
CCACCTGTAACGCTCTCGTCGGCTACGTCTCCCCCAACACCACCACTCTATCCGCCATCC
AGACTCTCTTCGGCGTCAAAAACTTTCGAACTCTACTCGGCGCCAACTCCCTCCCGGCCT
CGACCCCAACGAACCAAAGCGTAGCCGCGAAGGACAAGATCGTCATCCCCTTCCGCTGCC
GCTGCTCTAACGGAACCGGAATTTCGAACCACCGGCCGGTGTACACTGTGCAGAAGGACG
ACGGACTGTACCACATCGCGGCGGAGGTGTTCGCGGGACTGGTGACGTATCAGGAGATTC
AGGCGGTGAACAACATTTCGGATGCGAATTTGATTGAAGTAGGGCAAGAGCTGTGGATTC
CGCTGCCGTGTAGCTGCGATGAGGTGAATGAATCGAAGGTGGTGCACTACGGGCACGTGG
TGGAATCCGGAAGCTCCGTGGCGGAGATCGCGGAGAAGTACGGAACCACCGAAGAGACGC
TGTTGGAGCTCAACAACATTACAGATCCCAAGAATCTTAAGGCCGGTGATGTCCTTGATG
TTCCCCTCAAAGCTTGTACTTCTGTGGTAAAGAACACCTCATTGGACTACCCATTACTCC
TCTCTAATGGTACTTATGCCTACACTGCAAACAATTGTGTGAAGTGCCAGTGTTATTCTG
CAAACAACTGGACATTACAATGTGAGCAATCCGGGCTTAATATAACAAATGGAACGTGCC
CTAGCATGGAATGTGGGAGTAGTGGTTTATCCATTGGCAACTCCACATCTACCACTTGTA
ACAGGACAACCTGTGCCTATGCTGGTTACACCAACCAAACAATCTTCACAAGCCTTGTTG
AGTCCACTTGTTCATCTACTAACAATGCTCCCAGCTATGCTTCGAAAATCACTCTGCCCA
GTTGGAGATGGAACTTTGTTTTCATAGTAAGCCAATTGGTTATGCTTTATCTTCATCATT
CCCAAGAGCCCAGATTCCAGCATTTCAACAAGAGCTTTCGTTGTCATTGCCAAAGGGAGG
AATACATCATTAGTTGA