Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03140.t01
CDS Infomation

cds chromosome:12X:3:2253365:2255551:1 gene:VIT_03s0038g03140 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:D7U4Y3]
Sequence

ATGGAGAGGAAGGTGGCCATAATCGGAGCAGGCATCAGTGGCCTCCTAGCCTGCAAGTAT
ACCCTCTCCAAGGGCTATACTCCGGTTGTTTTCGAGTCCCGGAGCAGCATCGGCGGAGTT
TGGACCCAGACTTTCGAGACTACAAAGCTCCAAACACCCAGATCCGTCTACCAGTTCTCA
GACTTCCCATGGCCATCTTCTGTACCAGAGTTTCCCAACCATTCCCAAGTACTAGATTAT
ATTGTCTCTTATGCTACCCACTTCAACTTGCTCCCCCACATCAAGTTTAACTCTGAAGTC
CTCGGCATCGAGTATGAAGGCCCATCGGATGAAGAGGTGCAGGCATGGGAGCTCTGGAGC
GGTACCGGTGAGCCCTTCAACTCTAAAGGGAAATGGAGCATTACAGTGAAGGACACAAAC
AGCCTTTCAACTGAGGTTTACCAAGTGGGCTTTGTTATCCTATGTGTTGGACAATACAGC
GACGTTCCAAAGATCCCAGAATTTCCAGCAGGCAAAGGCCCAGAAGCGTTCCGTGGAAAG
GTGATACATTCAATGGAGTATGCAGCCATGGATTTCGAGAGAGCAGCTGAATTCATCAAA
GGGAAAAGAACTACTGTGGTTGGATTCCAGAAATCTGCGCTGGACATCGCAATGGAGTGC
TCAGCAGCAAATGGAGCGCTGAATCCATGCAGACTGTTATACAGGACCGAGCACTGGAAC
ATCCCGGATTACTATCCATGGGGGGTGCCTCTAGCTTATCTGTATTTTAACCGCTTTGCG
GAGCTTTTGGTTCACAAGCCTGGTGAAGGCTTCTTTCTGAGTCTCCTAGCTACCATTCTT
TCACCTTTGAAATGGGGGTTCTCAAAGTTTGTGGAAACCTATGTAAATCAGAAGCTGTCC
CTGGCAAAGTTTGGGATGGTACCGGAGCAAAGTTTTCACAAAGACATCAGTTCTTGTTTG
ATATCATCAATGCCGGAGGAGTTCTATGATAGAGTTGAGAAGGGAAGCATCATTCTGAAG
AAAGCTCCCAAGTTCAGCTTCTGCAAAGAAGGCATTGTGGTTGACGGTGAGGCTTCACCT
CTGGAGTCGGATTTGGTCATATTGGCAACAGGGTTCAAGGGAGATGAGAAGCTCAAAGAC
ATATTTGTGTCCCCCACCTTTCAGAACCACATCATTGGCTCCCCAAATGCATCAATCCCA
CTCTTCAGGCAATGCATTCATCCTCGAGTTCCACAACTAGCGGTGATTGGATTCTCAGAG
AGTGTTTCAAACTTGTACACGTCGGAGATGAGGAGCCGGTGGCTGGCGGAGTTTCTCGAC
GGCACATTCAAGCTGCCAAGCATTAAGGAGATGGAGAAAGATGCAGAAAGATGGGACCAG
TACCTGAAGCGATGCTCAGAGAAGCACTACCGGAGATCATGCATAGCAGCTCTTCATATA
TGGTACAATGATCAACTCTGCAAGGACATGGGGTGGAACCCTAAGAGGAAGAAGGGGTTT
TTTGCTGAATTGTTTGAGCCTTATGGTCCCCTGGATTACCGTCCAATATCTTGA

Peptide Sequence

PEP ID

VIT_03s0038g03140.t01
PEP Infomation

pep chromosome:12X:3:2253365:2255551:1 gene:VIT_03s0038g03140 transcript:VIT_03s0038g03140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:D7U4Y3]
Sequence

MERKVAIIGAGISGLLACKYTLSKGYTPVVFESRSSIGGVWTQTFETTKLQTPRSVYQFS
DFPWPSSVPEFPNHSQVLDYIVSYATHFNLLPHIKFNSEVLGIEYEGPSDEEVQAWELWS
GTGEPFNSKGKWSITVKDTNSLSTEVYQVGFVILCVGQYSDVPKIPEFPAGKGPEAFRGK
VIHSMEYAAMDFERAAEFIKGKRTTVVGFQKSALDIAMECSAANGALNPCRLLYRTEHWN
IPDYYPWGVPLAYLYFNRFAELLVHKPGEGFFLSLLATILSPLKWGFSKFVETYVNQKLS
LAKFGMVPEQSFHKDISSCLISSMPEEFYDRVEKGSIILKKAPKFSFCKEGIVVDGEASP
LESDLVILATGFKGDEKLKDIFVSPTFQNHIIGSPNASIPLFRQCIHPRVPQLAVIGFSE
SVSNLYTSEMRSRWLAEFLDGTFKLPSIKEMEKDAERWDQYLKRCSEKHYRRSCIAALHI
WYNDQLCKDMGWNPKRKKGFFAELFEPYGPLDYRPIS

Transcript Sequence

Transcript ID

VIT_03s0038g03140.t01
Transcript Infomation

cdna chromosome:12X:3:2253365:2255551:1 gene:VIT_03s0038g03140 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:D7U4Y3]
Sequence

AGATCTAACATACCTAAATGGAGAGGAAGGTGGCCATAATCGGAGCAGGCATCAGTGGCC
TCCTAGCCTGCAAGTATACCCTCTCCAAGGGCTATACTCCGGTTGTTTTCGAGTCCCGGA
GCAGCATCGGCGGAGTTTGGACCCAGACTTTCGAGACTACAAAGCTCCAAACACCCAGAT
CCGTCTACCAGTTCTCAGACTTCCCATGGCCATCTTCTGTACCAGAGTTTCCCAACCATT
CCCAAGTACTAGATTATATTGTCTCTTATGCTACCCACTTCAACTTGCTCCCCCACATCA
AGTTTAACTCTGAAGTCCTCGGCATCGAGTATGAAGGCCCATCGGATGAAGAGGTGCAGG
CATGGGAGCTCTGGAGCGGTACCGGTGAGCCCTTCAACTCTAAAGGGAAATGGAGCATTA
CAGTGAAGGACACAAACAGCCTTTCAACTGAGGTTTACCAAGTGGGCTTTGTTATCCTAT
GTGTTGGACAATACAGCGACGTTCCAAAGATCCCAGAATTTCCAGCAGGCAAAGGCCCAG
AAGCGTTCCGTGGAAAGGTGATACATTCAATGGAGTATGCAGCCATGGATTTCGAGAGAG
CAGCTGAATTCATCAAAGGGAAAAGAACTACTGTGGTTGGATTCCAGAAATCTGCGCTGG
ACATCGCAATGGAGTGCTCAGCAGCAAATGGAGCGCTGAATCCATGCAGACTGTTATACA
GGACCGAGCACTGGAACATCCCGGATTACTATCCATGGGGGGTGCCTCTAGCTTATCTGT
ATTTTAACCGCTTTGCGGAGCTTTTGGTTCACAAGCCTGGTGAAGGCTTCTTTCTGAGTC
TCCTAGCTACCATTCTTTCACCTTTGAAATGGGGGTTCTCAAAGTTTGTGGAAACCTATG
TAAATCAGAAGCTGTCCCTGGCAAAGTTTGGGATGGTACCGGAGCAAAGTTTTCACAAAG
ACATCAGTTCTTGTTTGATATCATCAATGCCGGAGGAGTTCTATGATAGAGTTGAGAAGG
GAAGCATCATTCTGAAGAAAGCTCCCAAGTTCAGCTTCTGCAAAGAAGGCATTGTGGTTG
ACGGTGAGGCTTCACCTCTGGAGTCGGATTTGGTCATATTGGCAACAGGGTTCAAGGGAG
ATGAGAAGCTCAAAGACATATTTGTGTCCCCCACCTTTCAGAACCACATCATTGGCTCCC
CAAATGCATCAATCCCACTCTTCAGGCAATGCATTCATCCTCGAGTTCCACAACTAGCGG
TGATTGGATTCTCAGAGAGTGTTTCAAACTTGTACACGTCGGAGATGAGGAGCCGGTGGC
TGGCGGAGTTTCTCGACGGCACATTCAAGCTGCCAAGCATTAAGGAGATGGAGAAAGATG
CAGAAAGATGGGACCAGTACCTGAAGCGATGCTCAGAGAAGCACTACCGGAGATCATGCA
TAGCAGCTCTTCATATATGGTACAATGATCAACTCTGCAAGGACATGGGGTGGAACCCTA
AGAGGAAGAAGGGGTTTTTTGCTGAATTGTTTGAGCCTTATGGTCCCCTGGATTACCGTC
CAATATCTTGAA