Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03090.t01
CDS Infomation

cds chromosome:12X:3:2208415:2209787:-1 gene:VIT_03s0038g03090 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-methyltransferase OMT3 [Source:UniProtKB/TrEMBL;Acc:F6I0W5]
Sequence

ATGGAGAAAGTGGTAAAAATCATGGAGAAAGAAGAGGCGGAAGCTGAAGTAGAGATGTGG
AAGTACATCTTTGGATTTGTGGAAATGGCTGTAGTGAAGTGTGGCATTGAGCTCGGCATA
GCTGATGTCATAGAAAGCCATGCAGGCCCCATCACTCTTTCGTCACTGTCGTCTTCCCTC
GGGTGCTCGCCTTCTGGTTTGTACCGGATCATGAGGTTCCTGGTGAACCGGAGAATATTC
AAGGAGGTGGCGACAAGCCAAGGCGACACAGGCTATCAGCAGACACCTCTCTCGCGGCGC
CTGATGACCCGCAGCGAGAATGGCATGGCTGCCTTACTGTTGCTGGAGAGCAGCCCAGTG
ATGCTGGCTCCATGGCATGGCCTAAGCGCCCGGCTTCTAGGGAAAGGGAACGCGACGTTC
GACGCTGCCCACGGGCAGGATGTCTGGGGCTATGCAGCTTCGCATCCTGCTCACAGTAAG
CTCATAAACGATGCGATGGCTTGTGATGCTAGAATGGCGGTTTCCGCCATTGTGAATGGC
TGTCCGGAGGTGTTTGATGGGGTGAGCACCCTGGTGGATGTCGGTGGGGGCGATGGCACT
GCCCTGAGGACGTTGATCAAGGCCCGTCCATTGATCAGAGGCATCAACTTTGATCTTCCT
CACGTTGTTTCCTCCGCCCCTAAATGTAACGGTGTTGAGTATGCCAGTGGGGATATGTTT
GACACTGTCCCTAAAGCGGATGCTGCTTTCCTCATGTGGGTTCTACACGACTGGGGAGAC
GAGGAGTGCATCCAAATTCTAGAAAAATGCAGACAAGCTATTCCTGGGGACAAAGGGAAG
GTGATAATAGTGGAAGCCGTGATACAAGAAAACGAAAAAGAAGGTGACAACAATCTTAAA
GACGTGGGGTTGATGCTAGACATGGTTATGATGGCTCATACTACTACCGGCAAAGAAAGG
ACCTTAAAGGAATGGGACTATGTCCTTAAGAAGGCCGGTTTTAATCGATACACCGTGAAA
CCTATTCGTGCCGTCAAATCTGTCATCGAAGCTTATCCTTAG

Peptide Sequence

PEP ID

VIT_03s0038g03090.t01
PEP Infomation

pep chromosome:12X:3:2208415:2209787:-1 gene:VIT_03s0038g03090 transcript:VIT_03s0038g03090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-methyltransferase OMT3 [Source:UniProtKB/TrEMBL;Acc:F6I0W5]
Sequence

MEKVVKIMEKEEAEAEVEMWKYIFGFVEMAVVKCGIELGIADVIESHAGPITLSSLSSSL
GCSPSGLYRIMRFLVNRRIFKEVATSQGDTGYQQTPLSRRLMTRSENGMAALLLLESSPV
MLAPWHGLSARLLGKGNATFDAAHGQDVWGYAASHPAHSKLINDAMACDARMAVSAIVNG
CPEVFDGVSTLVDVGGGDGTALRTLIKARPLIRGINFDLPHVVSSAPKCNGVEYASGDMF
DTVPKADAAFLMWVLHDWGDEECIQILEKCRQAIPGDKGKVIIVEAVIQENEKEGDNNLK
DVGLMLDMVMMAHTTTGKERTLKEWDYVLKKAGFNRYTVKPIRAVKSVIEAYP

Transcript Sequence

Transcript ID

VIT_03s0038g03090.t01
Transcript Infomation

cdna chromosome:12X:3:2208415:2209787:-1 gene:VIT_03s0038g03090 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-methyltransferase OMT3 [Source:UniProtKB/TrEMBL;Acc:F6I0W5]
Sequence

CCGTGTATATAATATGATACCCAAAGCAAAAGTTATTGCATGGTTGAGATATTTCCTTGA
ACTTTCTTCCCCAAGATTCACTAATCAATTTTCATGGAGAAAGTGGTAAAAATCATGGAG
AAAGAAGAGGCGGAAGCTGAAGTAGAGATGTGGAAGTACATCTTTGGATTTGTGGAAATG
GCTGTAGTGAAGTGTGGCATTGAGCTCGGCATAGCTGATGTCATAGAAAGCCATGCAGGC
CCCATCACTCTTTCGTCACTGTCGTCTTCCCTCGGGTGCTCGCCTTCTGGTTTGTACCGG
ATCATGAGGTTCCTGGTGAACCGGAGAATATTCAAGGAGGTGGCGACAAGCCAAGGCGAC
ACAGGCTATCAGCAGACACCTCTCTCGCGGCGCCTGATGACCCGCAGCGAGAATGGCATG
GCTGCCTTACTGTTGCTGGAGAGCAGCCCAGTGATGCTGGCTCCATGGCATGGCCTAAGC
GCCCGGCTTCTAGGGAAAGGGAACGCGACGTTCGACGCTGCCCACGGGCAGGATGTCTGG
GGCTATGCAGCTTCGCATCCTGCTCACAGTAAGCTCATAAACGATGCGATGGCTTGTGAT
GCTAGAATGGCGGTTTCCGCCATTGTGAATGGCTGTCCGGAGGTGTTTGATGGGGTGAGC
ACCCTGGTGGATGTCGGTGGGGGCGATGGCACTGCCCTGAGGACGTTGATCAAGGCCCGT
CCATTGATCAGAGGCATCAACTTTGATCTTCCTCACGTTGTTTCCTCCGCCCCTAAATGT
AACGGTGTTGAGTATGCCAGTGGGGATATGTTTGACACTGTCCCTAAAGCGGATGCTGCT
TTCCTCATGTGGGTTCTACACGACTGGGGAGACGAGGAGTGCATCCAAATTCTAGAAAAA
TGCAGACAAGCTATTCCTGGGGACAAAGGGAAGGTGATAATAGTGGAAGCCGTGATACAA
GAAAACGAAAAAGAAGGTGACAACAATCTTAAAGACGTGGGGTTGATGCTAGACATGGTT
ATGATGGCTCATACTACTACCGGCAAAGAAAGGACCTTAAAGGAATGGGACTATGTCCTT
AAGAAGGCCGGTTTTAATCGATACACCGTGAAACCTATTCGTGCCGTCAAATCTGTCATC
GAAGCTTATCCTTAG