Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g03040.t01
CDS Infomation

cds chromosome:12X:3:2141254:2162029:-1 gene:VIT_03s0038g03040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGATGGAAGACAACGAGAGTTGCAGTAGCAGAGTTCACGATTCGTCGTCGCCGGCG
CAGTCGCGGCAACAGCGCCAGAAGCTGGAGGTATACAATGAGGTTCTGCGTCGGCTCAAG
GATTCCGACAACGAGGAGGCGTTTGAGCCTGGTTTCGACGAGGAACTGTGGGCTCACTTC
GTTCGACTCCCCACTCGGTATGCTCTGGATGTGAATGTGGAGAGGGCTGAAGACGTTCTA
ACGCACAAGAGATTGCTGCATTTGGCGCATGATCCTACCAATAGGCCTGCAATTGAAGTT
CGCCTTGTGCAGGTTCATCCTATATCTGATGGGATTCATGGGAACATAGCTGATTCTATT
CATTCAAACTCTCCTACTATTGGGCCAGCCCATGGTTCTCCAAAGTACTCTAGCAAACAG
AGCATTCTCCCACCACCTGCCTTTGGATCATCGCCTAATCTTGAGGCCCTTGCAATTGAA
GCAAACAATTCTCATGTCCAAGATGGGGATGGGGATGATTCTGTACATGCTAGTTCACAG
TATTCTCGGCCCATGCATGAAATCACATTTTCATCAGATGACAAGCCAAAACTCCTGAGT
CAGTTGACTTGCTTGCTTTCTGAGCTTGAGCTCAACATCCAAGAAGCACATGCCTTTTCC
ACAGTGGATGGTTACTCCTTAGATGTCTTTGTTGTTGATGGATGGCCATATGAGGAAACA
GAGCAGCTGAGAACTGCACTGGAAAAGGAAGTTTTTAAGATTGAGAAGCAATCTTGGCCA
AATCATCATTCCTTATCTCCTACAGGCGAGCAAGAAGAAACAGGAATCAAATGCGAATCT
GATTTTGTGACAATACCTAATGATGGGACTGATGTCTGGGAAATCGATGTTAGGCAGTTG
AAATTTGAGAACAAAGTTGCATCGGGTTCATATGGTGATCTGTACAAAGGTACATACTGT
AGTCAGGAAGTGGCAATTAAAGTCCTCAAGCCTGAGCGTTTAAATTCAGACATGCAGAAA
GAGTTTGCACAGGAAGTCTTTATTATGAGGAAAGTTAGGCACAAGAATGTGGTACAGTTC
ATTGGTGCATGTACAAGGCCTCCAAGCTTATACATTGTGACAGAATTTATGTCTGGTGGA
AGTGTGTATGACTATCTACACAAGCAAAAGGGTGTTTTTAAGCTTCCTGCATTGCTCAAA
GTATCAATTGATGTTTCCAAGGGAATGAACTACTTGCACCAAAATAATATAATCCACAGG
GATTTGAAAGCTGCCAATCTTCTGATGGATGAGAATGAAGTTGTTAAGGTAGCAGATTTT
GGAGTTGCCAGAGTGAAAGCTCAATCTGGAGTTATGACTGCAGAAACTGGGACATATCGA
TGGATGGCTCCAGAGGTCATAGAACACAAGCCATATGATCACAAAGCTGATGTTTTTAGT
TTTGGAATTGTGTTATGGGAGTTGCTAACTGGAAAGCTTCCATATGAGTACTTGACCCCA
TTACAAGCAGCCGTTGGAGTCGTCCAAAAGGGTCTCCGGCCAACCATGCCAAAGAACACT
CATCCAAAGCTTGCAGAGTTGCTCGAGAGGTGCTGGCAACAAGATCCAACATTAAGACCC
GACTTCTCTGAAATTATAGAGATTCTTCAGCAAATAGCCAAAGAGGTTGGAGATGAAGAA
GACCGGCGCAAGGAGAAATCTTCTAGTGGATTCCTATCAGTTCTCAGACGTGGCCATCAC
TGA

Peptide Sequence

PEP ID

VIT_03s0038g03040.t01
PEP Infomation

pep chromosome:12X:3:2141254:2162029:-1 gene:VIT_03s0038g03040 transcript:VIT_03s0038g03040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVMEDNESCSSRVHDSSSPAQSRQQRQKLEVYNEVLRRLKDSDNEEAFEPGFDEELWAHF
VRLPTRYALDVNVERAEDVLTHKRLLHLAHDPTNRPAIEVRLVQVHPISDGIHGNIADSI
HSNSPTIGPAHGSPKYSSKQSILPPPAFGSSPNLEALAIEANNSHVQDGDGDDSVHASSQ
YSRPMHEITFSSDDKPKLLSQLTCLLSELELNIQEAHAFSTVDGYSLDVFVVDGWPYEET
EQLRTALEKEVFKIEKQSWPNHHSLSPTGEQEETGIKCESDFVTIPNDGTDVWEIDVRQL
KFENKVASGSYGDLYKGTYCSQEVAIKVLKPERLNSDMQKEFAQEVFIMRKVRHKNVVQF
IGACTRPPSLYIVTEFMSGGSVYDYLHKQKGVFKLPALLKVSIDVSKGMNYLHQNNIIHR
DLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFS
FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTMPKNTHPKLAELLERCWQQDPTLRP
DFSEIIEILQQIAKEVGDEEDRRKEKSSSGFLSVLRRGHH

Transcript Sequence

Transcript ID

VIT_03s0038g03040.t01
Transcript Infomation

cdna chromosome:12X:3:2141254:2162029:-1 gene:VIT_03s0038g03040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTTCAATGGTGATGGAAGACAACGAGAGTTGCAGTAGCAGAGTTCACGATTCGTCGTCG
CCGGCGCAGTCGCGGCAACAGCGCCAGAAGCTGGAGGTATACAATGAGGTTCTGCGTCGG
CTCAAGGATTCCGACAACGAGGAGGCGTTTGAGCCTGGTTTCGACGAGGAACTGTGGGCT
CACTTCGTTCGACTCCCCACTCGGTATGCTCTGGATGTGAATGTGGAGAGGGCTGAAGAC
GTTCTAACGCACAAGAGATTGCTGCATTTGGCGCATGATCCTACCAATAGGCCTGCAATT
GAAGTTCGCCTTGTGCAGGTTCATCCTATATCTGATGGGATTCATGGGAACATAGCTGAT
TCTATTCATTCAAACTCTCCTACTATTGGGCCAGCCCATGGTTCTCCAAAGTACTCTAGC
AAACAGAGCATTCTCCCACCACCTGCCTTTGGATCATCGCCTAATCTTGAGGCCCTTGCA
ATTGAAGCAAACAATTCTCATGTCCAAGATGGGGATGGGGATGATTCTGTACATGCTAGT
TCACAGTATTCTCGGCCCATGCATGAAATCACATTTTCATCAGATGACAAGCCAAAACTC
CTGAGTCAGTTGACTTGCTTGCTTTCTGAGCTTGAGCTCAACATCCAAGAAGCACATGCC
TTTTCCACAGTGGATGGTTACTCCTTAGATGTCTTTGTTGTTGATGGATGGCCATATGAG
GAAACAGAGCAGCTGAGAACTGCACTGGAAAAGGAAGTTTTTAAGATTGAGAAGCAATCT
TGGCCAAATCATCATTCCTTATCTCCTACAGGCGAGCAAGAAGAAACAGGAATCAAATGC
GAATCTGATTTTGTGACAATACCTAATGATGGGACTGATGTCTGGGAAATCGATGTTAGG
CAGTTGAAATTTGAGAACAAAGTTGCATCGGGTTCATATGGTGATCTGTACAAAGGTACA
TACTGTAGTCAGGAAGTGGCAATTAAAGTCCTCAAGCCTGAGCGTTTAAATTCAGACATG
CAGAAAGAGTTTGCACAGGAAGTCTTTATTATGAGGAAAGTTAGGCACAAGAATGTGGTA
CAGTTCATTGGTGCATGTACAAGGCCTCCAAGCTTATACATTGTGACAGAATTTATGTCT
GGTGGAAGTGTGTATGACTATCTACACAAGCAAAAGGGTGTTTTTAAGCTTCCTGCATTG
CTCAAAGTATCAATTGATGTTTCCAAGGGAATGAACTACTTGCACCAAAATAATATAATC
CACAGGGATTTGAAAGCTGCCAATCTTCTGATGGATGAGAATGAAGTTGTTAAGGTAGCA
GATTTTGGAGTTGCCAGAGTGAAAGCTCAATCTGGAGTTATGACTGCAGAAACTGGGACA
TATCGATGGATGGCTCCAGAGGTCATAGAACACAAGCCATATGATCACAAAGCTGATGTT
TTTAGTTTTGGAATTGTGTTATGGGAGTTGCTAACTGGAAAGCTTCCATATGAGTACTTG
ACCCCATTACAAGCAGCCGTTGGAGTCGTCCAAAAGGGTCTCCGGCCAACCATGCCAAAG
AACACTCATCCAAAGCTTGCAGAGTTGCTCGAGAGGTGCTGGCAACAAGATCCAACATTA
AGACCCGACTTCTCTGAAATTATAGAGATTCTTCAGCAAATAGCCAAAGAGGTTGGAGAT
GAAGAAGACCGGCGCAAGGAGAAATCTTCTAGTGGATTCCTATCAGTTCTCAGACGTGGC
CATCACTGACTAAAAGAAAATCATGATTATTCTCATAATGTGAAGATAGGCTCTCACTCC
ATAGCCGATTTCCCATCTTCTTTCATCAACACTGTATAGAATGATATACCATGTTTGATT
TTTTCTCTCTTTTTAGATTTATTTTTCTTGCTAATTTTTTTAACCAACCATTCTCCTTCA
GCGATACCCCAGTCCATAGTATATCAGTTAGAAGCGATCCTGTGGCATTGTAAGTTCGAA
AAACT