Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02940.t01
CDS Infomation

cds chromosome:12X:3:2066428:2081534:-1 gene:VIT_03s0038g02940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGTTTACTAAAAACCGAATCAAAAGATCGAAGCAAACGATGTCGAGGAGGAGGTCT
ACAACGAGTCTGGACAGAGCAGTCGTCGACGTTTGGCAGCGGGAGGTCGGCGGGCTCCCC
AACAGAAGCTTCGCGCATCGCCTCGCCGCTTCTAAGGATCTTGTGCTTCAATTTGATATC
TATAGGAAGCTGGAAAAGCACAGAGGTTGTGTGAACACAGTAAGCTTCAATGCAGATGGT
GAAATTCTTGTGTCAGGCTCTGATGACAGGCGGATTATACTATGGGATTGGGAATCTGGG
CATGTCAAACTTTCATTTGAATCTGGTCATATTAACAATGTTTTCCAAGCAAAGTTCATG
CCTTACACAGATGATCGAAGCATTGTTACTTGCGCAGCAGATGGCCAGGTGAGGCGTGCT
CAGATTCTAGAAAGTGGGCGGGTTGAGACTACTTTGCTAGCCAAACATCAGGGACGAGCT
CATAAGTTGGCCATTGAGCCTGGGAGCCCTTACATATTTTACACTTGTGGTGAAGATGGA
TTGGTTCAGCATATTGACCTGAGATCTAGGGCAGCTACAGAACTTTTGACATGCCATCAA
ATTGAAGAAAGGAGGAGGGGATTGCGGGCCGTTGTCCAACTAAATGCGATTGCAATAGAT
CCAAGGAATTCAAATCTGTTTGCTGTTGCAGGGTCAGATGAATATGCTCGACTTTATGAT
ATCCGCAAATATAAGTGGGATGGATCTACTGATTTTGATCAACCCATAGACTTCTTTTGC
CCTTCACATTTGATTGGTAATCCATATGTGGGAATAACAGGCCTGTCCTTCTCAGACCAG
AGAGAGCTTCTTGTGTCCTACAATGATGAGTTCATCTATCTTTTCACAAAGGATATCGGA
TTGGGACCTGACCCTATTCCAGCTTCTCCAGCTTCTTTGGGCAGTGGTGCAGATCATCCC
TTGGAAGCATCAACTATGGATACTGATGACAATGTTTCTCCCCAAGTCTACAAGGGGCAC
AAAAATTGTAAGACAGTGAAGGGTGTAGGCTTCTTTGGGCCTAAATGTGAGTATGTGGTG
AGTGGGTCAGACTGTGGCCGCATATTCATTTGGAAGAAGAGTGGGGAGCTCATTCGTGTA
ATGGAAGCTGATCAGCATGTGGTCAACTGTATCGAGTCTCATCCTCATGCTACAGTGCTT
GCCAGCAGTGGAATTGAGAAAGACATCAAGATATGGACTCCGAAGGCTACTGAGAAAGCT
ATCCTGCCTAAAACAATTGAACGGAAACCAAAGGCAATGGACAGGATGTACCGCTTGGCT
TCGCCCCAGGACCTGATGATACAGCTATTTTCATTGCAAAGGCAACTAAGGACAACTCGG
GAGGAGCACGGTGCTGCAAGCTTGGCTGAGAACTTGGTCGGAGATCAGGAACTTTTCGAT
CTCATAATGACATTTAATGCCAACAGTGATGTTTCCTCTGATGATGGAGATACATCCAGC
AGTGCTGAAGATCCATGTAGCTGA

Peptide Sequence

PEP ID

VIT_03s0038g02940.t01
PEP Infomation

pep chromosome:12X:3:2066428:2081534:-1 gene:VIT_03s0038g02940 transcript:VIT_03s0038g02940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVFTKNRIKRSKQTMSRRRSTTSLDRAVVDVWQREVGGLPNRSFAHRLAASKDLVLQFDI
YRKLEKHRGCVNTVSFNADGEILVSGSDDRRIILWDWESGHVKLSFESGHINNVFQAKFM
PYTDDRSIVTCAADGQVRRAQILESGRVETTLLAKHQGRAHKLAIEPGSPYIFYTCGEDG
LVQHIDLRSRAATELLTCHQIEERRRGLRAVVQLNAIAIDPRNSNLFAVAGSDEYARLYD
IRKYKWDGSTDFDQPIDFFCPSHLIGNPYVGITGLSFSDQRELLVSYNDEFIYLFTKDIG
LGPDPIPASPASLGSGADHPLEASTMDTDDNVSPQVYKGHKNCKTVKGVGFFGPKCEYVV
SGSDCGRIFIWKKSGELIRVMEADQHVVNCIESHPHATVLASSGIEKDIKIWTPKATEKA
ILPKTIERKPKAMDRMYRLASPQDLMIQLFSLQRQLRTTREEHGAASLAENLVGDQELFD
LIMTFNANSDVSSDDGDTSSSAEDPCS

Transcript Sequence

Transcript ID

VIT_03s0038g02940.t01
Transcript Infomation

cdna chromosome:12X:3:2066428:2081534:-1 gene:VIT_03s0038g02940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGTAGGGAGGGAGAAAACTTTCAGAGAGTTTAGAGAGAGAAAGTAGAGAGACGGGCAT
GTAAGAGAAAAATTAGAGAAAGAGAGCTTAGAGAGAGAAAGGCATCTCAGATGGTGTTTA
CTAAAAACCGAATCAAAAGATCGAAGCAAACGATGTCGAGGAGGAGGTCTACAACGAGTC
TGGACAGAGCAGTCGTCGACGTTTGGCAGCGGGAGGTCGGCGGGCTCCCCAACAGAAGCT
TCGCGCATCGCCTCGCCGCTTCTAAGGATCTTGTGCTTCAATTTGATATCTATAGGAAGC
TGGAAAAGCACAGAGGTTGTGTGAACACAGTAAGCTTCAATGCAGATGGTGAAATTCTTG
TGTCAGGCTCTGATGACAGGCGGATTATACTATGGGATTGGGAATCTGGGCATGTCAAAC
TTTCATTTGAATCTGGTCATATTAACAATGTTTTCCAAGCAAAGTTCATGCCTTACACAG
ATGATCGAAGCATTGTTACTTGCGCAGCAGATGGCCAGGTGAGGCGTGCTCAGATTCTAG
AAAGTGGGCGGGTTGAGACTACTTTGCTAGCCAAACATCAGGGACGAGCTCATAAGTTGG
CCATTGAGCCTGGGAGCCCTTACATATTTTACACTTGTGGTGAAGATGGATTGGTTCAGC
ATATTGACCTGAGATCTAGGGCAGCTACAGAACTTTTGACATGCCATCAAATTGAAGAAA
GGAGGAGGGGATTGCGGGCCGTTGTCCAACTAAATGCGATTGCAATAGATCCAAGGAATT
CAAATCTGTTTGCTGTTGCAGGGTCAGATGAATATGCTCGACTTTATGATATCCGCAAAT
ATAAGTGGGATGGATCTACTGATTTTGATCAACCCATAGACTTCTTTTGCCCTTCACATT
TGATTGGTAATCCATATGTGGGAATAACAGGCCTGTCCTTCTCAGACCAGAGAGAGCTTC
TTGTGTCCTACAATGATGAGTTCATCTATCTTTTCACAAAGGATATCGGATTGGGACCTG
ACCCTATTCCAGCTTCTCCAGCTTCTTTGGGCAGTGGTGCAGATCATCCCTTGGAAGCAT
CAACTATGGATACTGATGACAATGTTTCTCCCCAAGTCTACAAGGGGCACAAAAATTGTA
AGACAGTGAAGGGTGTAGGCTTCTTTGGGCCTAAATGTGAGTATGTGGTGAGTGGGTCAG
ACTGTGGCCGCATATTCATTTGGAAGAAGAGTGGGGAGCTCATTCGTGTAATGGAAGCTG
ATCAGCATGTGGTCAACTGTATCGAGTCTCATCCTCATGCTACAGTGCTTGCCAGCAGTG
GAATTGAGAAAGACATCAAGATATGGACTCCGAAGGCTACTGAGAAAGCTATCCTGCCTA
AAACAATTGAACGGAAACCAAAGGCAATGGACAGGATGTACCGCTTGGCTTCGCCCCAGG
ACCTGATGATACAGCTATTTTCATTGCAAAGGCAACTAAGGACAACTCGGGAGGAGCACG
GTGCTGCAAGCTTGGCTGAGAACTTGGTCGGAGATCAGGAACTTTTCGATCTCATAATGA
CATTTAATGCCAACAGTGATGTTTCCTCTGATGATGGAGATACATCCAGCAGTGCTGAAG
ATCCATGTAGCTGAATGACGTTGAGGTGACCTTTCTCCCAATAAAAATGATGGTAATTGT
CTATAATGTAGGGATTAAATTCAACCTGTTTGGAGTGGGGGATCTTGCTATACAAGTTAC
TTTGATTCATGATTTTTCTTCTTGTTTCTATTTTTTCCCTTATTTATGTTTTAATTATTT
TGGTAAGTTATGGTTAAATCTTCTTGCCATTTCCA